HHsearch alignment for GI: 254780502 and conserved domain: PRK08579
>PRK08579 anaerobic ribonucleoside triphosphate reductase; Provisional.
Probab=97.10 E-value=0.031 Score=35.47 Aligned_cols=198 Identities=16% Similarity=0.134 Sum_probs=113.2
Q ss_pred CCHH--HHHHHHHCC--CCCCC--HHHHHHHHHHHHHHHHH-------HCC--CCCHHHHHHHHH-HHHHHHCCCCHHHH
Q ss_conf 1125--540686254--34479--88855899999999765-------311--210001888886-44331000211118
Q gi|254780502|r 600 CNLG--SINLLAHFA--NNQFD--YDKLASTIRTAVRVLDN-------VID--INCHTIEKAKKS-NHTHRAIGLGLMGF 663 (954)
Q Consensus 600 CnL~--SiNL~~~v~--~~~~D--~~~l~~~v~~avr~LDn-------VId--~n~yp~~~~~~~-~~~~R~iGlGv~Gl 663 (954)
T Consensus 332 GnigVVTINLPRia~~akgd~~~F~~~Ld~~lela~~aL~~~r~r~~~~~~~~~~l~p~~~~~l~~~~~~~f~TIG~iGl 411 (623)
T PRK08579 332 GSVGVTTVNLPRIALKARGDDDRFWELYEERLELVRITLDWFRERYVKLLKTYPEMYSMIKEYLPEFPSSHFNTIGIIGL 411 (623)
T ss_pred CCCCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHH
T ss_conf 87324971479999883898999999999999999999999999999998634310458999856666437677447229
Q ss_pred HHHHHHC-CC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCCHHHCCCCCHHHHHCCHHHC
Q ss_conf 8999972-96--------3233788999999999985779997898753117-788766781213876244663005522
Q gi|254780502|r 664 QSALHLL-HI--------PYASPEAVEIADESMEFISFHAISASVELAQERG-AYSSFKGSLWDQGVFPIDSIGLLAEVR 733 (954)
Q Consensus 664 ad~L~~~-gi--------~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG-~~~~f~gS~~~~G~~~~d~~~~~~~~~ 733 (954)
T Consensus 412 ~E~~~~~~G~~~~~~~~~~~~~~~a~~~~~~vl~~mr~~~~~~~e----etg~~fsl~-aT-------PAEsl------- 472 (623)
T PRK08579 412 PEAAAIYLNDPELWTEGSRRDWLEAAELMKKMVEFAVEKAREWMK----ETGTPWNVE-EV-------PGESA------- 472 (623)
T ss_pred HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH----HHCCCCEEE-EC-------CCCHH-------
T ss_conf 999999719985545666302599999999999999999999999----879851256-57-------65326-------
Q ss_pred CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHC-CCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHH
Q ss_conf 53345402102728999999984120443011077436877838-89884756012034532676136646589998998
Q gi|254780502|r 734 DELAMNRTSRLPWDELKKRVKTIGMRNSNCMAIAPTATIANICG-VSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQ 812 (954)
Q Consensus 734 ~~~~~~~~~~~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g-~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~ 812 (954)
T Consensus 473 -----------s~RFak~D~k~fg~i----------------~~~~~~~d~~yYTNS~~--------------------- 504 (623)
T PRK08579 473 -----------AAKLAIKDLKLFPEL----------------REYLPDPENPIYSTSVA--------------------- 504 (623)
T ss_pred -----------HHHHHHHHHHHCCCC----------------CCCCCCCCCCEEECCCC---------------------
T ss_conf -----------789999999976653----------------33567899870358735---------------------
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEECC-CCCHHHHHHHHHH
Q ss_conf 589868999999851996277644886788650522206889999999852063005232047548-9998999999999
Q gi|254780502|r 813 RDLWDEAMISDLKYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYLD-EPSGKKLDFIYRQ 891 (954)
Q Consensus 813 ~g~~~~~~~~~i~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~~-~~t~~~i~~~y~~ 891 (954)
T Consensus 505 ----------------------P--------v~---~~i~~feki~~E~~~~~~~~GG~I~hi~l~E~~n~~a~~~lv~~ 551 (623)
T PRK08579 505 ----------------------P--------YY---GPLELWDRIRIEEKVQQEFTGGVMMHIFLGEEPDPEALAKLTKK 551 (623)
T ss_pred ----------------------C--------CC---CCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
T ss_conf ----------------------7--------89---99998999962142145126647998415888999999999999
Q ss_pred HHHCCC
Q ss_conf 997298
Q gi|254780502|r 892 AWLMGL 897 (954)
Q Consensus 892 Aw~~Gl 897 (954)
T Consensus 552 ~~~~~i 557 (623)
T PRK08579 552 IMKTKL 557 (623)
T ss_pred HHHCCC
T ss_conf 996499