HHsearch alignment for GI: 254780502 and conserved domain: PRK08665
>PRK08665 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=1353.93 Aligned_cols=552 Identities=33% Similarity=0.567 Sum_probs=526.4
Q ss_pred CCCHHHHHHHHHHHHHCC-CCCEEECHHHHHHHHHHHHHCCCC------CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCC
Q ss_conf 289899999999762114-892753889999999965416454------5368999999999743303586112221002
Q gi|254780502|r 292 AFEYLGLQILYDRYFLHI-NGSRIEMPQAFFMRVAMGLALKET------EKEKRAVEFYNLLSSFHFMCSTPTLFNSGTR 364 (954)
Q Consensus 292 ~F~Y~Gl~tL~~rYllk~-~~~~~E~pQ~~~mrVA~~la~~e~------~~~~~~~~~Y~~ls~~~~~~atPtl~Nagt~ 364 (954)
T Consensus 2 ~ls~nA~~vl~~rYl~kd~~g~~~Etp~~~~~RVA~~la~~e~~~~~~~~~~~~~~~fy~~l~~~~f~p~sPtl~naG~~ 81 (733)
T PRK08665 2 KLTDNALTVLEKRYLKKDEDGKPLETPEDMFRRVARTIAAAELKYDSKADVEALADRFYDLMTSLEFLPNSPTLMNAGRE 81 (733)
T ss_pred CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCC
T ss_conf 66789999999973712899797469999999999999864101588442999999999999859841699744279999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 22232110254766413589999899999851054441012443111200012787642889999998999997404666
Q gi|254780502|r 365 HPQLSSCFLTTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTNGKSQGVIPFLKVANDTAVAVNQGGKR 444 (954)
Q Consensus 365 ~~qlsSCfl~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~G~ssG~v~flk~~n~~~~~v~QgG~R 444 (954)
T Consensus 82 ~~qlssCFv~~v~Dsl~~I~~~~~~~a~i~k~GGG~G~~~S~lRp~g~~i~~~~g~ssG~vsfmk~~d~~~~~i~QgG~R 161 (733)
T PRK08665 82 LGQLSACFVLPVGDSIEEIFDAVKHAALIHKSGGGTGFSFSRLRPKNDVVRSTGGVASGPVSFMRVFDAATETIKQGGTR 161 (733)
T ss_pred CCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 99855179526899988999999999998623774201023548898963688984787212999999999797538976
Q ss_pred CCCEEEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHH
Q ss_conf 77247898356788999973025787302332023202034879999852128747871011444100134437899877
Q gi|254780502|r 445 KGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVTQNAGWTLFSPDEVSDLHDLYGKEFEIAYEN 524 (954)
Q Consensus 445 rGA~~~~l~~wH~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm~~v~~~~~w~Lf~P~~~~~L~d~~g~~fe~~Y~~ 524 (954)
T Consensus 162 RGA~m~~L~~~HpDI~~Fi~~K~~~~----~~~n~N~sV~i~D~FM~av~~d~~~~L~~p~~------------------ 219 (733)
T PRK08665 162 RGANMGILRVDHPDIMEFIMCKADNG----ELTNFNISVAITEAFMEAVEKDEEYDLINPRT------------------ 219 (733)
T ss_pred CCEEEEEECCCCCHHHHHHHCCCCCC----CCCCCCCCEEECHHHHHHHHCCCCEEEECCCC------------------
T ss_conf 54069997488721999997367768----43533750000899999987799669973678------------------
Q ss_pred HHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 87521048860577866889999999999882881278331120222124667034046752001366544332111255
Q gi|254780502|r 525 YERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNSSSEETAVCNLGS 604 (954)
Q Consensus 525 ~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~~~g~I~~sNlC~Ei~l~~~~~e~~vCnL~S 604 (954)
T Consensus 220 ---------g~~~~~v~AreLw~~I~~~a~~tgePgi~F~D~iN~~n~~~~~g~I~aTNpC~Eq~l~~~~s----CnLgS 286 (733)
T PRK08665 220 ---------GEVVGRLNAREVFDLIVEMAWENGEPGIVFLDRINRDNPTPHVGEIESTNPCGEQPLLPYES----CNLGS 286 (733)
T ss_pred ---------CEEEEEECHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCCCCCEEECCCCCCCCCCCCCCC----EEHHH
T ss_conf ---------80235861999999999999985896320114476469987778340346765757798763----22587
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 40686254344798885589999999976531121000188888644331000211118899997296323378899999
Q gi|254780502|r 605 INLLAHFANNQFDYDKLASTIRTAVRVLDNVIDINCHTIEKAKKSNHTHRAIGLGLMGFQSALHLLHIPYASPEAVEIAD 684 (954)
Q Consensus 605 iNL~~~v~~~~~D~~~l~~~v~~avr~LDnVId~n~yp~~~~~~~~~~~R~iGlGv~Glad~L~~~gi~Y~S~ea~~~~~ 684 (954)
T Consensus 287 INL~~~v~~~~~D~e~l~~~v~~avr~LDnvid~~~yPl~~i~~~~~~~R~iGLGv~Glad~L~~lgi~YdS~ea~~~~~ 366 (733)
T PRK08665 287 INLSKMVKDGEVDWEKLKEVVRLAVRFLDNVIDANKYPLPQIEEMTKGNRKIGLGVMGWADMLIQLGIPYDSEEAVKLAE 366 (733)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 78999860454789999999999999999998751584799999998468711112669999998387727989999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHCCHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999857799978987531177887667812138762446630055225334540210272899999998412044301
Q gi|254780502|r 685 ESMEFISFHAISASVELAQERGAYSSFKGSLWDQGVFPIDSIGLLAEVRDELAMNRTSRLPWDELKKRVKTIGMRNSNCM 764 (954)
Q Consensus 685 ~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~dW~~Lr~~i~~~G~RNs~l~ 764 (954)
T Consensus 367 ~i~~~i~~~a~~aS~eLA~ErG~Fp~f~~s~~~~~----------------------------------~~~~~RNa~~t 412 (733)
T PRK08665 367 KVMRFINDEGHAASRELAKERGPFPNYAGSIYDKR----------------------------------GLGPMRNATVT 412 (733)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH----------------------------------CCCCCCCCEEE
T ss_conf 99999999999999999996299856352146540----------------------------------64352101256
Q ss_pred CCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCC-CEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHH
Q ss_conf 107743687783889884756012034532676-1366465899989985898689999998519962776448867886
Q gi|254780502|r 765 AIAPTATIANICGVSQSIDPSYQNLYVKSNMSG-DFTVVNSFLVNELKQRDLWDEAMISDLKYHDGSIGNIERIPDDLKK 843 (954)
Q Consensus 765 aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G-~~~~vn~~l~~~l~~~g~~~~~~~~~i~~~~Gsv~~i~~ip~~~k~ 843 (954)
T Consensus 413 tIAPTGTiSl~a~~SsGIEP~Fa~~y~R~~~~g~~~~~vn~~~~~~l~~~g~~~~e~~~~i~~-~g~i~~~~~lp~~~~~ 491 (733)
T PRK08665 413 TIAPTGTISIIAGCSSGIEPLFALSFTRNVMDGTELVEVNPVFEEAAKERGFYSEELMKKIAE-KGSIQGIDEIPEDVRR 491 (733)
T ss_pred EECCCCCHHHHHCCCCCCCCCHHHHEEEEECCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCHHHHH
T ss_conf 667887344540677665754133057750468724784578999999818877999999970-2984677668878987
Q ss_pred HCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHH-HHH
Q ss_conf 5052220688999999985206300523204754-899989999999999972986797965884111-121
Q gi|254780502|r 844 IHATAFEIDPMWLIESASRRQKWIDQAQSLNLYL-DEPSGKKLDFIYRQAWLMGLKTTYYLRSRSATS-VEK 913 (954)
Q Consensus 844 ~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~-~~~t~~~i~~~y~~Aw~~GlKt~yy~R~~s~~~-~ek 913 (954)
T Consensus 492 ~F~tA~dI~p~~Hv~mqaa~Q~~vd~aISKTvNlP~~at~edv~~~Y~~A~~~G~KGiTvYRdgsr~~qvLs 563 (733)
T PRK08665 492 VFVTAHDISPEWHVRMQAAFQKYTDNAVSKTVNFPNEATIEDVEKVYRLAYELGCKGVTIYRDGSRDEQVLS 563 (733)
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCC
T ss_conf 742134699999999999999875030210206988889999999999999829978999618984552111