HHsearch alignment for GI: 254780502 and conserved domain: pfam03477

Probab=98.47  E-value=7.8e-07  Score=69.54  Aligned_cols=82  Identities=23%  Similarity=0.445  Sum_probs=68.9

Q ss_pred             EEEEECCCCEECCCHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHHCCCC----CCHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             289805997602598999999999851666--689999999897303789----88899999999999987441877146
Q gi|254780502|r  145 LKIMMDDGTLISFNSKRLEMIVEEACSGLQ--DVSSKIVLSETYKNMYDG----LSESDLETALIFSSRTLIEKEPNYAK  218 (954)
Q Consensus       145 l~V~krDG~~e~~d~~ki~~~i~~ac~gL~--~v~~~~i~~~~~~~lydg----itt~el~~~li~aA~~Li~~ePdy~~  218 (954)
T Consensus         1 ~~ViKRdG~~~~Fd~~KI~~ai~~A~~~~~~~~~~~~~i~~~V~~~l~~~~~~~i~~e~Iqd~Ve~~L~----~~~~~~~   76 (89)
T pfam03477         1 MKVIKRDGRREPFDREKIRRAIEKACEKREVDPDDAEEIAEEVEKELEDGGDREISTEEIQDLVEKTLA----EHPDYAV   76 (89)
T ss_pred             CEEEECCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH----CCCHHHH
T ss_conf             968938997746408999999999987226768889999999999999838987679999999999998----1687999


Q ss_pred             HHHHHHHHHHHH
Q ss_conf             779999999999
Q gi|254780502|r  219 VTARFLLEKLRR  230 (954)
Q Consensus       219 vAaRlll~~l~k  230 (954)
T Consensus        77 a~~yi~yR~~r~   88 (89)
T pfam03477        77 ARAYILYRNLRK   88 (89)
T ss_pred             HHHHHHHHHHHC
T ss_conf             999999999852