254780503
putative glutamine synthetase
GeneID in NCBI database: | 8209498 | Locus tag: | CLIBASIA_01950 |
Protein GI in NCBI database: | 254780503 | Protein Accession: | YP_003064916.1 |
Gene range: | -(772575, 773960) | Protein Length: | 461aa |
Gene description: | putative glutamine synthetase | ||
COG prediction: | [E] Glutamine synthetase | ||
KEGG prediction: | glnA; putative glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] | ||
SEED prediction: | glutamine synthetase family protein | ||
Pathway involved in KEGG: | Nitrogen metabolism [PATH:las00910]
Alanine, aspartate and glutamate metabolism [PATH:las00250] Arginine and proline metabolism [PATH:las00330] Two-component system [PATH:las02020] | ||
Subsystem involved in SEED: | Glutamine synthetases;
Glutamine, Glutamate, Aspartate and Asparagine Biosynthesis | ||
sequence | sequence profile |
Prediction of Local Sequence Properties
Source | Summary | Result |
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Close Homologs Detected by BLAST or PSI-BLAST
Homolog within the Genome Detected by BLAST
Original result of BLAST against C. L. asiaticus genome
Identity | Alignment graph | Length | Definition | E-value | |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | |||
254780185 | 458 | glutamine synthetase protein [Candidatus Liberibac | 4e-24 |
>gi|254780185|ref|YP_003064598.1| glutamine synthetase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 458 | Back alignment |
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Score = 103 bits (258), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 94/394 (23%), Positives = 171/394 (43%), Gaps = 30/394 (7%) Query: 88 DLRLSPDLSTLSIVPWEMDPTAQIVCDVVD-YNGKEVTYTPRNVLKRVLNFYAQNELKP- 145 +L L PD+ T+ + P+ T +C+V D + PR ++ +++ ++ Sbjct: 66 NLLLIPDIETMHMDPFYAQSTVAFICNVYDPITLQPYNRDPRYTAQKAIDYLQTTDIGDT 125 Query: 146 -IIAPEIEFYLIAKNEDPDYPLQPPKGRSGRSIL-----------GGQSYSIMGINEFDE 193 ++ EF++ P++ L SY++ ++ + Sbjct: 126 LLLGITTEFFVFDNVHCTISPIKSGFALESTEFLQNGNNKGYDSHAKSSYTLPPQDKLHD 185 Query: 194 IIDDIWKFSEKQGLEIDTLIHEEGPAQFEINIRHGDPLKLADQVFLFKRTIREAAFKHDI 253 + +I G++I ++ AQ ++ L +D + +K ++ + A + Sbjct: 186 MRSEIVSALNNIGVQITKYHNQINDAQHSFGLQSESLLHASDNLQKYKYSVHQVANSYCK 245 Query: 254 YATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNPDGSETDNFR----YFIGGLQKYIP 309 ATFM KP+ ++ GS M+++ S+ K + IF+ G++ D Y++GG+ K+ Sbjct: 246 IATFMPKPIASHNGSGMYLNMSIH--KGEKAIFT---GNQHDRVSLKGLYYLGGIIKHAK 300 Query: 310 NALVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTAFRIPFSD-AKTKRIENRLPSSDTN 368 + + NSY+RL+ D P + N + + RIP+ + + K IE R P N Sbjct: 301 SLNALTNASTNSYKRLLTDSQSPTKLTYSTHNHSASCRIPYENKSDNKSIEIRFPDLSAN 360 Query: 369 PYLVLAASLACGLLGILQKIEPTPPTMKSANQEAINLPR---GLLEAVTLLENTSHF--- 422 PYL AA L GL GI +KI P + + +E +PR L E++ L+ F Sbjct: 361 PYLAPAAILMAGLDGIAKKIHPGKNIDELSLEEQNTIPRICISLRESLENLDKDREFLKV 420 Query: 423 KDIFGSQFIDMYANLKRNEFETFMQVISPWEREF 456 ++F ID + NLK E SP E E Sbjct: 421 GNVFDDDQIDAFINLKMKEVLKLESSPSPVEFEM 454 |
Close Homologs Detected BLAST or PSI-BLAST in the First 2 Iterations
Original result of PSI-BLAST first 2 iterations
Identity | Alignment graph | Length | Definition | Round | E-value |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | |||
315122300 | 461 | putative glutamine synthetase [Candidatus Liberibacter | 1 | 0.0 | |
116250527 | 478 | glutamine synthetase [Rhizobium leguminosarum bv. vicia | 1 | 0.0 | |
241203151 | 478 | glutamate--putrescine ligase [Rhizobium leguminosarum b | 1 | 0.0 | |
327192181 | 478 | glutamine synthetase protein [Rhizobium etli CNPAF512] | 1 | 0.0 | |
86356357 | 478 | glutamine synthetase protein [Rhizobium etli CFN 42] Le | 1 | 0.0 | |
190890412 | 478 | glutamine synthetase [Rhizobium etli CIAT 652] Length = | 1 | 0.0 | |
222084914 | 478 | glutamine synthetase protein [Agrobacterium radiobacter | 1 | 0.0 | |
222147618 | 478 | glutamine synthetase [Agrobacterium vitis S4] Length = | 1 | 0.0 | |
209547973 | 478 | glutamate--putrescine ligase [Rhizobium leguminosarum b | 1 | 0.0 | |
150395529 | 478 | glutamate--putrescine ligase [Sinorhizobium medicae WSM | 1 | 0.0 |
>gi|315122300|ref|YP_004062789.1| putative glutamine synthetase [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 461 | Back alignment and organism information |
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Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust. Identities = 427/461 (92%), Positives = 438/461 (95%) Query: 1 MNKNDQSPMNVRGVKNWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISNIPLT 60 M KN+QSP+NVRGV+NW+QAA+WLKD IEDVECITPDLAGIPRGKMM SSKFISNIPL Sbjct: 1 MKKNNQSPLNVRGVENWDQAAQWLKDRGIEDVECITPDLAGIPRGKMMSSSKFISNIPLA 60 Query: 61 VPSAIYRHTISGESLHSPYLFHNERDGDLRLSPDLSTLSIVPWEMDPTAQIVCDVVDYNG 120 VPSAIYRHTISGESLHSP LF DGDLRLSPDLSTLS+VPWE DPTAQIVCDVVDYNG Sbjct: 61 VPSAIYRHTISGESLHSPNLFRYGPDGDLRLSPDLSTLSVVPWEEDPTAQIVCDVVDYNG 120 Query: 121 KEVTYTPRNVLKRVLNFYAQNELKPIIAPEIEFYLIAKNEDPDYPLQPPKGRSGRSILGG 180 +EVTYTPRNVLKRVL+FY QN LKPIIAPEIEFYLIAKNEDPDYPL PPKGRSGRSILGG Sbjct: 121 EEVTYTPRNVLKRVLDFYVQNGLKPIIAPEIEFYLIAKNEDPDYPLHPPKGRSGRSILGG 180 Query: 181 QSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPAQFEINIRHGDPLKLADQVFLF 240 QSYSIMGINEFDEIIDDIW FSEKQGLEIDTLIHEEGPAQFEINIRHGDPL LADQVFLF Sbjct: 181 QSYSIMGINEFDEIIDDIWDFSEKQGLEIDTLIHEEGPAQFEINIRHGDPLNLADQVFLF 240 Query: 241 KRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNPDGSETDNFRYF 300 KRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSN+NIFSN DGSETD FRYF Sbjct: 241 KRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNKNIFSNQDGSETDFFRYF 300 Query: 301 IGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTAFRIPFSDAKTKRIEN 360 IGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTAFRIPFSDAKTKRIEN Sbjct: 301 IGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTAFRIPFSDAKTKRIEN 360 Query: 361 RLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSANQEAINLPRGLLEAVTLLENTS 420 RLPSSDTNPYL LAASLACGLLGILQKIEPTPPT SANQ+AINLPRGLLEAVTLLENTS Sbjct: 361 RLPSSDTNPYLALAASLACGLLGILQKIEPTPPTTNSANQKAINLPRGLLEAVTLLENTS 420 Query: 421 HFKDIFGSQFIDMYANLKRNEFETFMQVISPWEREFLLLNV 461 HFKDIFGSQFID+Y LKRNEFETFMQVISPWEREFLLLNV Sbjct: 421 HFKDIFGSQFIDIYTTLKRNEFETFMQVISPWEREFLLLNV 461 |
Species: Candidatus Liberibacter solanacearum Genus: Candidatus Liberibacter Family: Rhizobiaceae Order: Rhizobiales Class: Alphaproteobacteria Phylum: Proteobacteria Superkingdom: Bacteria |
>gi|116250527|ref|YP_766365.1| glutamine synthetase [Rhizobium leguminosarum bv. viciae 3841] Length = 478 | Back alignment and organism information |
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>gi|241203151|ref|YP_002974247.1| glutamate--putrescine ligase [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 478 | Back alignment and organism information |
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>gi|327192181|gb|EGE59154.1| glutamine synthetase protein [Rhizobium etli CNPAF512] Length = 478 | Back alignment and organism information |
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>gi|86356357|ref|YP_468249.1| glutamine synthetase protein [Rhizobium etli CFN 42] Length = 478 | Back alignment and organism information |
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>gi|190890412|ref|YP_001976954.1| glutamine synthetase [Rhizobium etli CIAT 652] Length = 478 | Back alignment and organism information |
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>gi|222084914|ref|YP_002543443.1| glutamine synthetase protein [Agrobacterium radiobacter K84] Length = 478 | Back alignment and organism information |
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>gi|222147618|ref|YP_002548575.1| glutamine synthetase [Agrobacterium vitis S4] Length = 478 | Back alignment and organism information |
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>gi|209547973|ref|YP_002279890.1| glutamate--putrescine ligase [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 478 | Back alignment and organism information |
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>gi|150395529|ref|YP_001325996.1| glutamate--putrescine ligase [Sinorhizobium medicae WSM419] Length = 478 | Back alignment and organism information |
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Conserved Domains in CDD Database
Detected by RPS-BLAST and HHsearch
Conserved Domains in CDD Database Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
Original result of RPS-BLASTagainst CDD database part II
Identity | Alignment graph | Length | Definition | E-value |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | ||
pfam00120 | 257 | pfam00120, Gln-synt_C, Glutamine synthetase, catalytic | 5e-77 | |
TIGR00653 | 460 | TIGR00653, GlnA, glutamine synthetase, type I | 3e-69 | |
COG0174 | 443 | COG0174, GlnA, Glutamine synthetase [Amino acid transpo | 1e-118 | |
TIGR03105 | 435 | TIGR03105, gln_synth_III, glutamine synthetase, type II | 9e-56 | |
PRK09469 | 469 | PRK09469, glnA, glutamine synthetase; Provisional | 8e-33 | |
KOG0683 | 380 | KOG0683, KOG0683, KOG0683, Glutamine synthetase [Amino | 1e-08 | |
COG3968 | 724 | COG3968, COG3968, Uncharacterized protein related to gl | 2e-04 |
>gnl|CDD|143894 pfam00120, Gln-synt_C, Glutamine synthetase, catalytic domain | Back alignment and domain information |
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>gnl|CDD|161979 TIGR00653, GlnA, glutamine synthetase, type I | Back alignment and domain information |
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>gnl|CDD|30523 COG0174, GlnA, Glutamine synthetase [Amino acid transport and metabolism] | Back alignment and domain information |
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>gnl|CDD|163137 TIGR03105, gln_synth_III, glutamine synthetase, type III | Back alignment and domain information |
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>gnl|CDD|181884 PRK09469, glnA, glutamine synthetase; Provisional | Back alignment and domain information |
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>gnl|CDD|35902 KOG0683, KOG0683, KOG0683, Glutamine synthetase [Amino acid transport and metabolism] | Back alignment and domain information |
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>gnl|CDD|33749 COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only] | Back alignment and domain information |
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Conserved Domains in CDD Database Detected by HHsearch
Original result of HHsearch against CDD database
Identity | Alignment graph | Length | Definition | Probability |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | ||
TIGR00653 | 486 | GlnA glutamine synthetase, type I; InterPro: IPR004809 | 100.0 | |
TIGR03105 | 435 | gln_synth_III glutamine synthetase, type III. This fami | 100.0 | |
COG0174 | 443 | GlnA Glutamine synthetase [Amino acid transport and met | 100.0 | |
PRK09469 | 469 | glnA glutamine synthetase; Provisional | 100.0 | |
pfam00120 | 257 | Gln-synt_C Glutamine synthetase, catalytic domain. | 100.0 | |
PRK13517 | 371 | carboxylate-amine ligase; Provisional | 98.66 | |
PRK13516 | 372 | carboxylate-amine ligase; Provisional | 98.6 | |
TIGR02050 | 297 | gshA_cyan_rel uncharacterized enzyme; InterPro: IPR0117 | 98.59 | |
PRK13515 | 381 | carboxylate-amine ligase; Provisional | 98.51 | |
PRK13518 | 357 | carboxylate-amine ligase; Provisional | 98.4 | |
pfam04107 | 291 | GCS2 Glutamate-cysteine ligase family 2(GCS2). Also kno | 98.1 | |
COG2170 | 369 | Uncharacterized conserved protein [Function unknown] | 98.02 | |
KOG0683 | 380 | consensus | 100.0 | |
COG3968 | 724 | Uncharacterized protein related to glutamine synthetase | 99.91 | |
pfam03951 | 84 | Gln-synt_N Glutamine synthetase, beta-Grasp domain. | 99.43 | |
KOG0683 | 380 | consensus | 97.55 | |
COG3572 | 456 | GshA Gamma-glutamylcysteine synthetase [Coenzyme metabo | 95.71 | |
TIGR03444 | 390 | gshA_related glutamate--cysteine ligase family protein. | 91.42 |
>TIGR00653 GlnA glutamine synthetase, type I; InterPro: IPR004809 Glutamine synthetase type I (or glutamate-ammonia ligase) has a dodecameric form, which can be subdivided into 1-alpha and 1-beta forms | Back alignment and domain information |
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>TIGR03105 gln_synth_III glutamine synthetase, type III | Back alignment and domain information |
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>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism] | Back alignment and domain information |
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>PRK09469 glnA glutamine synthetase; Provisional | Back alignment and domain information |
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>pfam00120 Gln-synt_C Glutamine synthetase, catalytic domain | Back alignment and domain information |
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>PRK13517 carboxylate-amine ligase; Provisional | Back alignment and domain information |
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>PRK13516 carboxylate-amine ligase; Provisional | Back alignment and domain information |
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>TIGR02050 gshA_cyan_rel uncharacterized enzyme; InterPro: IPR011793 This family represents a division of a larger family, the other branch of which is predicted to act as glutamate--cysteine ligase (the first of two enzymes in glutathione biosynthesis) in the cyanobacteria | Back alignment and domain information |
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>PRK13515 carboxylate-amine ligase; Provisional | Back alignment and domain information |
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>PRK13518 carboxylate-amine ligase; Provisional | Back alignment and domain information |
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>pfam04107 GCS2 Glutamate-cysteine ligase family 2(GCS2) | Back alignment and domain information |
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>COG2170 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
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>KOG0683 consensus | Back alignment and domain information |
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>COG3968 Uncharacterized protein related to glutamine synthetase [General function prediction only] | Back alignment and domain information |
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>pfam03951 Gln-synt_N Glutamine synthetase, beta-Grasp domain | Back alignment and domain information |
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>KOG0683 consensus | Back alignment and domain information |
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>COG3572 GshA Gamma-glutamylcysteine synthetase [Coenzyme metabolism] | Back alignment and domain information |
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>TIGR03444 gshA_related glutamate--cysteine ligase family protein | Back alignment and domain information |
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Homologous Structures in PDB Database
Detected by PSI-BLAST, RPS-BLAST and HHsearch
Homologous Structures Detected by PSI-BLAST against Nonredundant Database
Identity | Alignment graph | Length | Definition | E-value |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | ||
1hto_A | 477 | Crystallographic Structure Of A Relaxed Glutamine S | 2e-78 | |
2bvc_A | 486 | Crystal Structure Of Mycobacterium Tuberculosis Glu | 2e-78 | |
1f52_A | 468 | Crystal Structure Of Glutamine Synthetase From Salm | 2e-77 | |
2gls_A | 469 | Refined Atomic Model Of Glutamine Synthetase At 3.5 | 2e-77 | |
2lgs_B | 446 | Feedback Inhibition Of Fully Unadenylylated Glutami | 3e-69 | |
2ojw_A | 384 | Crystal Structure Of Human Glutamine Synthetase In | 1e-15 | |
2uu7_A | 381 | Crystal Structure Of Apo Glutamine Synthetase From | 3e-15 | |
2d3a_A | 356 | Crystal Structure Of The Maize Glutamine Synthetase | 1e-12 | |
3fky_A | 370 | Crystal Structure Of The Glutamine Synthetase Gln1d | 2e-13 | |
2j9i_A | 421 | Lengsin Is A Survivor Of An Ancient Family Of Class | 8e-09 |
>gi|22218713|pdb|1HTO|A Chain A, Crystallographic Structure Of A Relaxed Glutamine Synthetase From Mycobacterium Tuberculosis Length = 477 | Back alignment and structure |
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats. Identities = 121/482 (25%), Positives = 189/482 (39%), Gaps = 47/482 (9%) Query: 15 KNWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISNIPLTVPSAIYRHTISGES 74 K + K KD ++E V+ DL GI + +P+S F ++ G S Sbjct: 3 KTPDDVFKLAKDEKVEYVDVRFCDLPGIMQHFTIPASAFDKSV------FDDGLAFDGSS 56 Query: 75 LHSPYLFHNERDGDLRLSPDLSTLSIVPWEMDPTAQIVCD-VVDYNGKEVTYTPRNVLKR 133 + F + + D+ L PD T I P+ T I + + + PRN+ ++ Sbjct: 57 IRG---FQSIHESDMLLLPDPETARIDPFRAAKTLNINFFVHDPFTLEPYSRDPRNIARK 113 Query: 134 VLNFYAQNE--LKPIIAPEIEFYLIA---------------------KNEDPDYPLQPPK 170 N+ E EFY+ N Sbjct: 114 AENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAATEADGSP 173 Query: 171 GRSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPAQF-EINIRHGD 229 R + G + + +++ ++ D + G ++ HE G EIN + Sbjct: 174 NRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAEINYQFNS 233 Query: 230 PLKLADQVFLFKRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNP 289 L AD + L+K I+ A+++ TFM KP+ GS MH HQS+ + Sbjct: 234 LLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWKDGAPLMYDETG 293 Query: 290 DGSETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTA--FR 347 +D R++IGGL + P+ L P NSY+RLV P+N + NR+ Sbjct: 294 YAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQRNRSACVRIP 353 Query: 348 IPFSDAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSAN----QEAI 403 I S+ K KR+E R P S NPYL +A L GL GI KIEP P K +EA Sbjct: 354 ITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDLYELPPEEAA 413 Query: 404 NLPRG---LLEAVTLLENTSHF---KDIFGSQFIDMYANLKRN-EFETFMQVISPWEREF 456 ++P+ L + + LE + +F + I+ + + KR E E P+E Sbjct: 414 SIPQTPTQLSDVIDRLEADHEYLTEGGVFTNDLIETWISFKRENEIEPVNIRPHPYEFAL 473 Query: 457 LL 458 Sbjct: 474 YY 475 |
>gi|73536298|pdb|2BVC|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Glutamine Synthetase In Complex With A Transition State Mimic Length = 486 | Back alignment and structure |
>gi|9256961|pdb|1F52|A Chain A, Crystal Structure Of Glutamine Synthetase From Salmonella Typhimurium Co-Crystallized With Adp Length = 468 | Back alignment and structure |
>gi|21730903|pdb|2GLS|A Chain A, Refined Atomic Model Of Glutamine Synthetase At 3.5 Angstroms Resolution Length = 469 | Back alignment and structure |
>gi|145580062|pdb|2OJW|A Chain A, Crystal Structure Of Human Glutamine Synthetase In Complex With Adp And Phosphate Length = 384 | Back alignment and structure |
>gi|158430851|pdb|2UU7|A Chain A, Crystal Structure Of Apo Glutamine Synthetase From Dog ( Canis Familiaris) Length = 381 | Back alignment and structure |
>gi|112490284|pdb|2D3A|A Chain A, Crystal Structure Of The Maize Glutamine Synthetase Complexed With Adp And Methionine Sulfoximine Phosphate Length = 356 | Back alignment and structure |
gi|260656232|pdb|3FKY|A Chain A, Crystal Structure Of The Glutamine Synthetase Gln1deltan18 From The Yeast Saccharomyces Cerevisiae Length = 370 | Back alignment and structure |
>gi|122920859|pdb|2J9I|A Chain A, Lengsin Is A Survivor Of An Ancient Family Of Class I Glutamine Synthetases In Eukaryotes That Has Undergone Evolutionary Re-Engineering For A Tissue-Specific Role In The Vertebrate Eye Lens. Length = 421 | Back alignment and structure |
Homologous Structures in PDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | ||
1f52_A | 468 | Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A | 5e-97 | |
2bvc_A | 486 | Glutamine synthetase 1; ligase, transition state mimic; | 6e-72 | |
2j9i_A | 421 | Glutamate-ammonia ligase domain-containing protein 1; 1 | 4e-67 | |
2ojw_A | 384 | Glutamine synthetase; amino-acid biosynthesis, ligase, | 7e-45 | |
2d3a_A | 356 | Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea | 4e-44 | |
3fky_A | 370 | Glutamine synthetase; beta-grAsp, catalytic domain, ace | 2e-43 |
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A Length = 468 | Back alignment and structure |
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Score = 350 bits (898), Expect = 5e-97 Identities = 121/471 (25%), Positives = 191/471 (40%), Gaps = 43/471 (9%) Query: 18 EQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISNIPLTVPSAIYRHTISGESLHS 77 E L ++ ++ V+ D G + +P+ + + +I G Sbjct: 3 EHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEF-FEEGKMFDGSSIGG----- 56 Query: 78 PYLFHNERDGDLRLSPDLSTLSIVPWEMDPTAQIVCDVVDYNGKE-VTYTPRNVLKRVLN 136 + + D+ L PD ST I P+ D T I CD+++ + PR++ KR + Sbjct: 57 ---WKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAED 113 Query: 137 FYAQNELKP--IIAPEIEFYLIAKNED-----------------PDYPLQPPKGRSG-RS 176 + + + PE EF+L + + G G R Sbjct: 114 YLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRP 173 Query: 177 ILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPA-QFEINIRHGDPLKLAD 235 + G + + ++ +I ++ E+ GL ++ HE A Q E+ R K AD Sbjct: 174 GVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKAD 233 Query: 236 QVFLFKRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNPDGSETD 295 ++ ++K + A + ATFM KPM GS MH H S+ +N + ++ Sbjct: 234 EIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTN-LFSGDKYAGLSE 292 Query: 296 NFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTAFRIP-FSDAK 354 Y+IGG+ K+ + P NSY+RLV PV A+ NR+ + RIP + K Sbjct: 293 QALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVASPK 352 Query: 355 TKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSA-------NQEAINLPR 407 +RIE R P NPYL AA L GL GI KI P P K+ +E + Sbjct: 353 ARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPEEAKEIPQVAG 412 Query: 408 GLLEAVTLLENTSHFK---DIFGSQFIDMYANLKRNEFETFMQVISPWERE 455 L EA+ L+ F +F + ID Y L+R E + P E E Sbjct: 413 SLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFE 463 |
>2bvc_A Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis} SCOP: d.15.9.1 d.128.1.1 PDB: 2wgs_A* 2whi_A* 1hto_A* 1htq_A* Length = 486 | Back alignment and structure |
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>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} Length = 421 | Back alignment and structure |
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>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural genomics, structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A Length = 384 | Back alignment and structure |
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>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* Length = 356 | Back alignment and structure |
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>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} Length = 370 | Back alignment and structure |
---|
Homologous Structures in PDB70 Database Detected by HHsearch
Original result of HHsearch against PDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | ||
1f52_A | 468 | Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A | 100.0 | |
2bvc_A | 486 | Glutamine synthetase 1; ligase, transition state mimic; | 100.0 | |
2j9i_A | 421 | Glutamate-ammonia ligase domain-containing protein 1; 1 | 100.0 | |
3fky_A | 370 | Glutamine synthetase; beta-grAsp, catalytic domain, ace | 100.0 | |
2ojw_A | 384 | Glutamine synthetase; amino-acid biosynthesis, ligase, | 100.0 | |
2d3a_A | 356 | Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea | 100.0 | |
1r8g_A | 372 | Hypothetical protein YBDK; structural genomics, unknown | 98.46 | |
2gwd_A | 449 | Glutamate cysteine ligase; disulfide bridges, glutathio | 97.13 |
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A | Back alignment and structure |
---|
Probab=100.00 E-value=0 Score=888.96 Aligned_cols=432 Identities=28% Similarity=0.422 Sum_probs=384.6 Q ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHC-CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEE Q ss_conf 98999999971798399999978898331267619887301-56773610000024277434665557788877899960 Q gi|254780503|r 16 NWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISN-IPLTVPSAIYRHTISGESLHSPYLFHNERDGDLRLSPD 94 (461) Q Consensus 16 ~~~~v~~~l~~~~I~~V~v~~~Dl~G~~RgK~vp~~~f~~~-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~l~PD 94 (461) +.++|+++|++++|+||+++|+|++|++|||.||+++|.+. ...|+ .++|+++.+ +...+++|++++|| T Consensus 1 s~e~v~~~l~~~~i~~V~~~~~Dl~G~~R~k~ip~~~~~~~~~~~G~-------~fdgssi~g---~~~~~~sD~~l~PD 70 (468) T 1f52_A 1 SAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGK-------MFDGSSIGG---WKGINESDMVLMPD 70 (468) T ss_dssp CHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCE-------EEEGGGSTT---SCCSSCCEEEEEEC T ss_pred CHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCC-------CCCCCCCCC---CCCCCCCCEEEEEC T ss_conf 97999999998898399999999999878999829997699985898-------656225257---67799889899982 Q ss_pred CCCCEECCCCCCCEEEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCCC--EEECCCCCEEEEECCCCCCC------- Q ss_conf 01245387888770999974033575-212342577789999986102764--02322441799821678888------- Q gi|254780503|r 95 LSTLSIVPWEMDPTAQIVCDVVDYNG-KEVTYTPRNVLKRVLNFYAQNELK--PIIAPEIEFYLIAKNEDPDY------- 164 (461) Q Consensus 95 ~~Tl~~lPw~~~~~a~vl~~~~~~dG-~p~~~~PR~iLkr~i~~l~~~G~~--~~~g~E~EF~L~~~~~~~~~------- 164 (461) ++|++++||..+.++.|+|++++.++ .|+..|||++|++++++++++|+. +.+|+|+|||+|+....... T Consensus 71 ~sT~~~~Pw~~~~~~~v~cd~~~~~~~~p~~~~PR~~l~~~~~~~~~~G~~~~~~~~~E~ef~l~~~~~~~~~~~~~~~~ 150 (468) T 1f52_A 71 ASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVA 150 (468) T ss_dssp GGGCEECSSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEE T ss_pred CCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC T ss_conf 78408898689862899999863676788778855899999999987599642341455699963143346787887454 Q ss_pred ------C----CCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC-CCCCCEEECCCCCHH Q ss_conf ------7----778778-8887766787777665442899999899767863110221010127-864201112665211 Q gi|254780503|r 165 ------P----LQPPKG-RSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEG-PAQFEINIRHGDPLK 232 (461) Q Consensus 165 ------~----~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~g-pGQ~Ei~~~~~~~l~ 232 (461) + .....+ ...++...+++|++...+...++++++++.|+++||+||++|+|+| +||+||++.|+++|+ T Consensus 151 ~~~~e~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~ve~~~~E~~~~GQ~Ei~~~~~d~L~ 230 (468) T 1f52_A 151 IDDIEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTK 230 (468) T ss_dssp EECTTCGGGGGCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHH T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCHHH T ss_conf 57622245778766678867510478871232664206779999999999739872110126567861887056775555 Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHH Q ss_conf 378999999999999863066033112321135662689998763136874233588-6552156665457776422321 Q gi|254780503|r 233 LADQVFLFKRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNP-DGSETDNFRYFIGGLQKYIPNA 311 (461) Q Consensus 233 aaD~~~~~k~~ik~vA~~~G~~atFmpKP~~~~~GsG~H~h~SL~d~~~g~n~f~~~-~~~ls~~~~~fiaGil~h~~al 311 (461) +||+++++|++||+||++||++|||||||+.+.+|||||+|+|||+ +|+|+|+++ .+++|+++++||||||+|+|++ T Consensus 231 aAD~~~~~K~~vk~iA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~--~g~n~f~~~~~~~lS~~~~~~iaGlL~h~~~l 308 (468) T 1f52_A 231 KADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAK--NGTNLFSGDKYAGLSEQALYYIGGVIKHAKAI 308 (468) T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEE--TTEETTBCSSGGGBCHHHHHHHHHHHHTHHHH T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH T ss_conf 4679999999999999961964688401268888874379998358--99606689887772899999999999863766 Q ss_pred HHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC-CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 222076610134420465575433424334500365022-3886520353035877998999999999999989846888 Q gi|254780503|r 312 LVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTAFRIPF-SDAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEP 390 (461) Q Consensus 312 ~a~~~PtvNSYkRl~p~~~ap~~~~WG~~NR~~~iRip~-~~~~~~riE~R~~d~~aNPYL~laail~agl~Gi~~~l~p 390 (461) ++|+|||+||||||+|++|||+++|||++||+++||||. ++++++|||+|+||++|||||++||+|+|||+||+++++| T Consensus 309 ~a~~~PtvNSYkRl~p~~~AP~~~~WG~~NR~~~iRip~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~p 388 (468) T 1f52_A 309 NALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHP 388 (468) T ss_dssp HHHHSCSGGGGGTSSSCSSCCCEEEEESSCTTEEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCC T ss_pred HHHHCCCCHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC T ss_conf 60555881564167898758863352222584207815578987615784379987698999999999999999837999 Q ss_pred CCCCCCCCCC-------CHHCCCCCHHHHHHHHHCCHHHHH---HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH Q ss_conf 7433453000-------311047898999999865989887---35589999999999999999863899789987631 Q gi|254780503|r 391 TPPTMKSANQ-------EAINLPRGLLEAVTLLENTSHFKD---IFGSQFIDMYANLKRNEFETFMQVISPWEREFLLL 459 (461) Q Consensus 391 ~~~~~~~~~~-------~~~~LP~sL~eAl~~l~~d~~l~~---~lg~~~v~~~~~~k~~E~~~~~~~vt~wE~~~yl~ 459 (461) ++|+.+|+|+ +.++||+||.|||++|++|+.+++ +||++||++|+++||+||++|++.||+||+++||. T Consensus 389 ~~p~~~~~~~~~~~~~~~~~~LP~sl~eAl~~l~~d~~~~~a~~~fg~~~v~~~~~~K~~E~~~~~~~vt~wE~~~Y~~ 467 (468) T 1f52_A 389 GEPMDKNLYDLPPEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYS 467 (468) T ss_dssp CSCCCSCCSSSCCSSTTCCCBCCSSHHHHHHHHHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTT T ss_pred CCCCCCCHHHCCHHHHHCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC T ss_conf 9867788144998676131016137999999997396988865515699999999999999999977999999974068 |
>2bvc_A Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis} SCOP: d.15.9.1 d.128.1.1 PDB: 2wgs_A* 2whi_A* 1hto_A* 1htq_A* | Back alignment and structure |
---|
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} | Back alignment and structure |
---|
>3fky_A Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} | Back alignment and structure |
---|
>2ojw_A Glutamine synthetase; amino-acid biosynthesis, ligase, structural genomics, structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A | Back alignment and structure |
---|
>2d3a_A Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* | Back alignment and structure |
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>1r8g_A Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} SCOP: d.128.1.3 PDB: 1tt4_A | Back alignment and structure |
---|
>2gwd_A Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, redox regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A* | Back alignment and structure |
---|
Homologous Domains in SCOP and MMDB Database
Detected by RPS-BLAST and HHsearch
Homologous Domains in SCOP70 (Version1.75) Database Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | E-value |
461 | putative glutamine synthetase [Candidatus Liberibacter | |||
d1f52a2 | 368 | d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal | 1e-61 | |
d2bvca2 | 374 | d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal | 8e-59 | |
d2bvca1 | 100 | d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal dom | 2e-12 | |
d1f52a1 | 100 | d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal dom | 6e-12 |
>d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Length = 368 | Back information, alignment and structure |
---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Salmonella typhimurium [TaxId: 90371] Score = 231 bits (589), Expect = 1e-61 Identities = 99/361 (27%), Positives = 151/361 (41%), Gaps = 33/361 (9%) Query: 127 PRNVLKRVLNFYAQNELKP--IIAPEIEFYLI------AKNEDPDYPLQPPKG------- 171 PR++ KR ++ + + PE EF+L A + +G Sbjct: 4 PRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTK 63 Query: 172 -----RSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEE-GPAQFEINI 225 + R + G + + ++ +I ++ E+ GL ++ HE Q E+ Sbjct: 64 YEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVAT 123 Query: 226 RHGDPLKLADQVFLFKRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNI 285 R K AD++ ++K + A + ATFM KPM GS MH H S+ +N Sbjct: 124 RFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKNGTN-LF 182 Query: 286 FSNPDGSETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTA 345 + ++ Y+IGG+ K+ + P NSY+RLV PV A+ NR+ + Sbjct: 183 SGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARNRSAS 242 Query: 346 FRIP-FSDAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSA------ 398 RIP + K +RIE R P NPYL AA L GL GI KI P P K+ Sbjct: 243 IRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPE 302 Query: 399 -NQEAINLPRGLLEAVTLLENTSHFK---DIFGSQFIDMYANLKRNEFETFMQVISPWER 454 +E + L EA+ L+ F +F + ID Y L+R E + P E Sbjct: 303 EAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEF 362 Query: 455 E 455 E Sbjct: 363 E 363 |
>d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 374 | Back information, alignment and structure |
---|
>d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 100 | Back information, alignment and structure |
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>d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} Length = 100 | Back information, alignment and structure |
---|
Homologous Domains in SCOP70 (Version 1.75) Database Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
Identity | Alignment graph | Length | Definition | Probability |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | ||
d1f52a2 | 368 | Glutamine synthetase, C-terminal domain {Salmonella typ | 100.0 | |
d2bvca2 | 374 | Glutamine synthetase, C-terminal domain {Mycobacterium | 100.0 | |
d1f52a1 | 100 | Glutamine synthetase, N-terminal domain {Salmonella typ | 99.82 | |
d2bvca1 | 100 | Glutamine synthetase, N-terminal domain {Mycobacterium | 99.82 | |
d1r8ga_ | 368 | Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: | 98.16 |
>d1f52a2 d.128.1.1 (A:101-468) Glutamine synthetase, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
---|
class: Alpha and beta proteins (a+b) fold: Glutamine synthetase/guanido kinase superfamily: Glutamine synthetase/guanido kinase family: Glutamine synthetase catalytic domain domain: Glutamine synthetase, C-terminal domain species: Salmonella typhimurium [TaxId: 90371] Probab=100.00 E-value=0 Score=733.82 Aligned_cols=334 Identities=30% Similarity=0.455 Sum_probs=299.3 Q ss_pred CCCHHHHHHHHHHHHHCCCCCE--EECCCCCEEEEECCCCC-------------CCCC----CCCCC-CCCCCCCCCCCC Q ss_conf 3425777899999861027640--23224417998216788-------------8877----78778-888776678777 Q gi|254780503|r 124 TYTPRNVLKRVLNFYAQNELKP--IIAPEIEFYLIAKNEDP-------------DYPL----QPPKG-RSGRSILGGQSY 183 (461) Q Consensus 124 ~~~PR~iLkr~i~~l~~~G~~~--~~g~E~EF~L~~~~~~~-------------~~~~----~~~~~-~~~~~~~~~~~y 183 (461) ..|||++|||++++++++|+++ .+|+|+|||||++.... .... ....+ ........+.+| T Consensus 1 ~~dPR~iLkr~~~~l~~~G~~~~~~~g~E~EF~Lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (368) T d1f52a2 1 DRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYF 80 (368) T ss_dssp TTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGGGCCCTTCCCCCCCCTTCCSS T ss_pred CCCHHHHHHHHHHHHHHCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE T ss_conf 98879999999999997699870378854288999421035576777565577322456887666887787655577615 Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC-CCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC Q ss_conf 7665442899999899767863110221010127-864201112665211378999999999999863066033112321 Q gi|254780503|r 184 SIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEG-PAQFEINIRHGDPLKLADQVFLFKRTIREAAFKHDIYATFMAKPM 262 (461) Q Consensus 184 ~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~g-pGQ~Ei~~~~~~~l~aaD~~~~~k~~ik~vA~~~G~~atFmpKP~ 262 (461) ++...+..++|+++|++.|+.+||+||++|+|+| ||||||++.|+++|+|||+++++|++||+||++||++|||||||+ T Consensus 81 ~~~~~~~~~~~~~~i~~~l~~~Gi~ve~~~~E~~~~gq~Ei~~~~~~~l~aAD~~~~~k~~ik~iA~~~Gl~atFmpKP~ 160 (368) T d1f52a2 81 PVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPM 160 (368) T ss_dssp BCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCSCSS T ss_pred EEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCC T ss_conf 53001107889999999888622570564223456784322078786577889999999999999997436334741568 Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCC Q ss_conf 135662689998763136874233588-6552156665457776422321222076610134420465575433424334 Q gi|254780503|r 263 QNYPGSAMHIHQSVLDIKSNQNIFSNP-DGSETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGYDN 341 (461) Q Consensus 263 ~~~~GsG~H~h~SL~d~~~g~n~f~~~-~~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl~p~~~ap~~~~WG~~N 341 (461) .+.+|||||+|+|||+ +|+|+|+++ .+++|+++++||||||+|++++++|+|||+||||||+|++|||++++||.+| T Consensus 161 ~~~~GsG~HiH~Sl~~--~~~n~~~~~~~~~lS~~~~~fiaGll~~~~~~~al~~PtvNSYkRl~~~~~aP~~~~Wg~~N 238 (368) T d1f52a2 161 FGDNGSGMHCHMSLAK--NGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSARN 238 (368) T ss_dssp TTSCCCCEEEEEEEEE--TTEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSGGGGGTSSSCSSCCCEEEEESSC T ss_pred CCCCCCCEEEEEEECC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEECCCC T ss_conf 8987753258987415--99856565555564899999999999866998999779960776524777687434523676 Q ss_pred CCEEEEECC-CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC-------CHHCCCCCHHHHH Q ss_conf 500365022-38865203530358779989999999999999898468887433453000-------3110478989999 Q gi|254780503|r 342 RTTAFRIPF-SDAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSANQ-------EAINLPRGLLEAV 413 (461) Q Consensus 342 R~~~iRip~-~~~~~~riE~R~~d~~aNPYL~laail~agl~Gi~~~l~p~~~~~~~~~~-------~~~~LP~sL~eAl 413 (461) |+++||||. ++++++|||+|++|++|||||++||+|+|||+||+++++|++|+.+|+++ +.++||.||.||| T Consensus 239 R~a~iRi~~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~~~~~~~~~~~~~~~~~~~~~~~lP~sl~eAl 318 (368) T d1f52a2 239 RSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPEEAKEIPQVAGSLEEAL 318 (368) T ss_dssp TTEEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCSCCCSCCSSSCCSSTTCCCBCCSSHHHHH T ss_pred CCCCEEECCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHCHHCCCCCHHHHH T ss_conf 55314640257886624784478801777899999999765424215899997778724489767623201513799999 Q ss_pred HHHHCCHHHHH---HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH Q ss_conf 99865989887---35589999999999999999863899789987631 Q gi|254780503|r 414 TLLENTSHFKD---IFGSQFIDMYANLKRNEFETFMQVISPWEREFLLL 459 (461) Q Consensus 414 ~~l~~d~~l~~---~lg~~~v~~~~~~k~~E~~~~~~~vt~wE~~~yl~ 459 (461) ++|++|+.+++ +||++||+.|+++||+||++|+++||+||+++||. T Consensus 319 ~al~~d~~~~~a~~~lGe~~v~~y~~~K~~E~~~~~~~vt~wE~~~Yl~ 367 (368) T d1f52a2 319 NALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYS 367 (368) T ss_dssp HHHHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTT T ss_pred HHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC T ss_conf 9996497878876515699999999999999999967999999974168 |
>d2bvca2 d.128.1.1 (A:105-478) Glutamine synthetase, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
---|
>d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
---|
>d2bvca1 d.15.9.1 (A:5-104) Glutamine synthetase, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
---|
>d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
---|
Homologous Domains in MMDB70 Database Detected by RPS-BLAST
Original result of RPS-BLAST against MMDB70 database
Identity | Alignment graph | Length | Definition | E-value |
Target | 461 | putative glutamine synthetase [Candidatus Liberiba | ||
2bvc_A_115-416 | 302 | (A:115-416) Glutamine synthetase 1; ligase, transi | 7e-49 | |
1f52_A_99-399 | 301 | (A:99-399) Glutamine synthetase; ADP, MPD, ligase; | 5e-46 | |
3fky_A_107-370 | 264 | (A:107-370) Glutamine synthetase; beta-grAsp, cata | 7e-44 | |
2d3a_A_105-356 | 252 | (A:105-356) Glutamine synthetase; ligase; HET: P3S | 1e-43 | |
2ojw_A_129-384 | 256 | (A:129-384) Glutamine synthetase; amino-acid biosy | 8e-42 | |
2j9i_A_96-127_223-358 | 168 | (A:96-127,A:223-358) Glutamate-ammonia ligase doma | 1e-32 | |
1f52_A_1-98 | 98 | (A:1-98) Glutamine synthetase; ADP, MPD, ligase; H | 6e-19 | |
2bvc_A_1-114 | 114 | (A:1-114) Glutamine synthetase 1; ligase, transiti | 1e-17 | |
2j9i_A_1-95 | 95 | (A:1-95) Glutamate-ammonia ligase domain-containin | 6e-17 | |
2j9i_A_128-222 | 95 | (A:128-222) Glutamate-ammonia ligase domain-contai | 3e-16 | |
2j9i_A_359-421 | 63 | (A:359-421) Glutamate-ammonia ligase domain-contai | 1e-09 |
>2bvc_A (A:115-416) Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis}Length = 302 | Back alignment and structure |
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Score = 189 bits (480), Expect = 7e-49 Identities = 83/298 (27%), Positives = 123/298 (41%), Gaps = 26/298 (8%) Query: 127 PRNVLKRVLNFYAQNELKPI--IAPEIEFYLI---------------------AKNEDPD 163 PRN+ ++ N+ + E EFY+ N Sbjct: 2 PRNIARKAENYLISTGIADTAYFGAEAEFYIFDSVSFDSRANGSFYEVDAISGWWNTGAA 61 Query: 164 YPLQPPKGRSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEE-GPAQFE 222 R + G + + +++ ++ D + G ++ HE Q E Sbjct: 62 TEADGSPNRGYKVRHKGGYFPVAPNDQYVDLRDKMLTNLINSGFILEKGHHEVGSGGQAE 121 Query: 223 INIRHGDPLKLADQVFLFKRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSN 282 IN + L AD + L+K I+ A+++ TFM KP+ GS MH HQS+ + Sbjct: 122 INYQFNSLLHAADDMQLYKYIIKNTAWQNGKTVTFMPKPLFGDNGSGMHCHQSLWKDGAP 181 Query: 283 QNIFSNPDGSETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGYDNR 342 +D R++IGGL + P+ L P NSY+RLV P+N + NR Sbjct: 182 LMYDETGYAGLSDTARHYIGGLLHHAPSLLAFTNPTVNSYKRLVPGYEAPINLVYSQRNR 241 Query: 343 TTAFRIPFS--DAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSA 398 + RIP + + K KR+E R P S NPYL +A L GL GI KIEP P K Sbjct: 242 SACVRIPITGSNPKAKRLEFRSPDSSGNPYLAFSAMLMAGLDGIKNKIEPQAPVDKDL 299 |
>1f52_A (A:99-399) Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium}Length = 301 | Back alignment and structure |
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>3fky_A (A:107-370) Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae}Length = 264 | Back alignment and structure |
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>2d3a_A (A:105-356) Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*Length = 252 | Back alignment and structure |
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>2ojw_A (A:129-384) Glutamine synthetase; amino-acid biosynthesis, ligase, structural genomics, structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_ALength = 256 | Back alignment and structure |
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>2j9i_A (A:96-127,A:223-358) Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}Length = 168 | Back alignment and structure |
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>1f52_A (A:1-98) Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium}Length = 98 | Back alignment and structure |
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>2bvc_A (A:1-114) Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis}Length = 114 | Back alignment and structure |
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>2j9i_A (A:1-95) Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}Length = 95 | Back alignment and structure |
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>2j9i_A (A:128-222) Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}Length = 95 | Back alignment and structure |
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>2j9i_A (A:359-421) Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}Length = 63 | Back alignment and structure |
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Homologous Domains in MMDB70 Database Detected by HHsearch
Original result of HHsearch against MMDB70 database
Identity | Alignment graph | Length | Definition | Probability |
Target | 461 | putative glutamine synthetase [Candidatus Liberibacter | ||
1f52_A_99-399 | 301 | Glutamine synthetase; ADP, MPD, ligase; HET: ADP; | 100.0 | |
2bvc_A_115-416 | 302 | Glutamine synthetase 1; ligase, transition state m | 100.0 | |
3fky_A_107-370 | 264 | Glutamine synthetase; beta-grAsp, catalytic domain | 100.0 | |
2ojw_A_129-384 | 256 | Glutamine synthetase; amino-acid biosynthesis, lig | 100.0 | |
2d3a_A_105-356 | 252 | Glutamine synthetase; ligase; HET: P3S ADP; 2.63A | 100.0 | |
1r8g_A_ | 372 | Hypothetical protein YBDK; structural genomics, un | 98.3 | |
2j9i_A_96-127_223-358 | 168 | Glutamate-ammonia ligase domain-containing protein | 100.0 | |
2j9i_A_128-222 | 95 | Glutamate-ammonia ligase domain-containing protein | 99.84 | |
2bvc_A_1-114 | 114 | Glutamine synthetase 1; ligase, transition state m | 99.83 | |
1f52_A_1-98 | 98 | Glutamine synthetase; ADP, MPD, ligase; HET: ADP; | 99.82 | |
2j9i_A_1-95 | 95 | Glutamate-ammonia ligase domain-containing protein | 99.79 | |
3fky_A_1-106 | 106 | Glutamine synthetase; beta-grAsp, catalytic domain | 98.14 | |
2d3a_A_1-104 | 104 | Glutamine synthetase; ligase; HET: P3S ADP; 2.63A | 97.91 | |
2ojw_A_42-128 | 87 | Glutamine synthetase; amino-acid biosynthesis, lig | 97.81 | |
2j9i_A_359-421 | 63 | Glutamate-ammonia ligase domain-containing protein | 99.18 | |
2gwd_A_1-422 | 422 | Glutamate cysteine ligase; disulfide bridges, glut | 98.3 | |
1va6_A_19-156_243-337_461-481 | 254 | Glutamate--cysteine ligase; glutathione homeostasi | 95.86 | |
2d3a_A_105-356 | 252 | Glutamine synthetase; ligase; HET: P3S ADP; 2.63A | 94.96 |
>1f52_A (A:99-399) Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} | Back alignment and structure |
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Probab=100.00 E-value=0 Score=606.11 Aligned_cols=277 Identities=29% Similarity=0.443 Sum_probs=248.9 Q ss_pred CCCCCHHHHHHHHHHHHHCCCCC--EEECCCCCEEEEECCCCCCCCC-----------------CC-CCCCCCCCCCCCC Q ss_conf 12342577789999986102764--0232244179982167888877-----------------78-7788887766787 Q gi|254780503|r 122 EVTYTPRNVLKRVLNFYAQNELK--PIIAPEIEFYLIAKNEDPDYPL-----------------QP-PKGRSGRSILGGQ 181 (461) Q Consensus 122 p~~~~PR~iLkr~i~~l~~~G~~--~~~g~E~EF~L~~~~~~~~~~~-----------------~~-~~~~~~~~~~~~~ 181 (461) .|+.|||++|||++++++++|+. +++|+|+|||||++..+..... .. .......+..+++ T Consensus 1 ~~~~~pR~vLkr~~~~l~~~G~~~~~~~g~E~EF~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (301) T 1f52_A 1 GYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGG 80 (301) T ss_dssp CCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEEEECTTCGGGGGCCCTTCCCCCCCCTTCC T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 58889699999999999981996313434534799974443455666663344641113567876667887876576653 Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH-HCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCC Q ss_conf 7776654428999998997678631102210-101278642011126652113789999999999998630660331123 Q gi|254780503|r 182 SYSIMGINEFDEIIDDIWKFSEKQGLEIDTL-IHEEGPAQFEINIRHGDPLKLADQVFLFKRTIREAAFKHDIYATFMAK 260 (461) Q Consensus 182 ~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~-~~E~gpGQ~Ei~~~~~~~l~aaD~~~~~k~~ik~vA~~~G~~atFmpK 260 (461) +|++.+.+..+++++++++.|+++||+|+++ |+|+||||+||++.|+++|++||+++++|++||+||++||+.|||||| T Consensus 81 ~~~~~~~~~~~~~~~~i~~~l~~~Gi~v~~~~h~E~~~gQ~Ei~~~~~~~l~aAD~~~~~r~~ik~vA~~~G~~atFmpK 160 (301) T 1f52_A 81 YFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPK 160 (301) T ss_dssp SSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHHHHHHHHHHHHHHHHHHHHTTCEEECCSC T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCC T ss_conf 02677420078999999999997699717755022367877995067878888999999999999999984987897166 Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCC Q ss_conf 211356626899987631368742335-8865521566654577764223212220766101344204655754334243 Q gi|254780503|r 261 PMQNYPGSAMHIHQSVLDIKSNQNIFS-NPDGSETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLDMGCPVNNAWGY 339 (461) Q Consensus 261 P~~~~~GsG~H~h~SL~d~~~g~n~f~-~~~~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl~p~~~ap~~~~WG~ 339 (461) |+.+.+|||||+|+|||+ + +.|+|. ++.+++|+.+++||||||+|++++++|++||+||||||+|++|||++++||. T Consensus 161 P~~~~~Gsg~H~h~Sl~~-~-~~n~~~~~~~~~lS~~~~~fiaGil~h~~~l~a~~~pt~nSY~Rl~~~~~ap~~~~wG~ 238 (301) T 1f52_A 161 PMFGDNGSGMHCHMSLAK-N-GTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLAYSA 238 (301) T ss_dssp SSTTSCCCCEEEEEEEEE-T-TEETTBCSSGGGBCHHHHHHHHHHHHTHHHHHHHHSCSGGGGGTSSSCSSCCCEEEEES T ss_pred CCCCCCCCEEEEEECCCC-C-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEECC T ss_conf 679999661479972456-9-98667777765522999999999999999977643799863321579865777531236 Q ss_pred CCCCEEEEECCC-CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC Q ss_conf 345003650223-8865203530358779989999999999999898468887433453000 Q gi|254780503|r 340 DNRTTAFRIPFS-DAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSANQ 400 (461) Q Consensus 340 ~NR~~~iRip~~-~~~~~riE~R~~d~~aNPYL~laail~agl~Gi~~~l~p~~~~~~~~~~ 400 (461) +||+++||||.. +.+++|||+|++|++|||||++|+||+||++||+++++||+|+.+|+|+ T Consensus 239 ~NR~a~iRvp~~~~~~~~r~E~R~~da~aNPYl~lAail~agl~Gi~~~l~~~~~~~~~~~e 300 (301) T 1f52_A 239 RNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYD 300 (301) T ss_dssp SCTTEEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCCCSCCCSCCSS T ss_pred CCCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 67753088303689877667863788887899999999999999998479999888786244 |
>2bvc_A (A:115-416) Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis} | Back alignment and structure |
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>3fky_A (A:107-370) Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} | Back alignment and structure |
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>2ojw_A (A:129-384) Glutamine synthetase; amino-acid biosynthesis, ligase, structural genomics, structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A | Back alignment and structure |
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>2d3a_A (A:105-356) Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* | Back alignment and structure |
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>1r8g_A (A:) Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli} | Back alignment and structure |
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>2j9i_A (A:96-127,A:223-358) Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} | Back alignment and structure |
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>2j9i_A (A:128-222) Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} | Back alignment and structure |
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>2bvc_A (A:1-114) Glutamine synthetase 1; ligase, transition state mimic; HET: P3S ADP; 2.1A {Mycobacterium tuberculosis} | Back alignment and structure |
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>1f52_A (A:1-98) Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} | Back alignment and structure |
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>2j9i_A (A:1-95) Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} | Back alignment and structure |
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>3fky_A (A:1-106) Glutamine synthetase; beta-grAsp, catalytic domain, acetylation, cytoplasm, ligase, UBL conjugation; HET: FLC; 2.95A {Saccharomyces cerevisiae} | Back alignment and structure |
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>2d3a_A (A:1-104) Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* | Back alignment and structure |
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>2ojw_A (A:42-128) Glutamine synthetase; amino-acid biosynthesis, ligase, structural genomics, structural genomics consortium, SGC; HET: ADP; 2.05A {Homo sapiens} PDB: 2qc8_A* 2uu7_A | Back alignment and structure |
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>2j9i_A (A:359-421) Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus} | Back alignment and structure |
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>2gwd_A (A:1-422) Glutamate cysteine ligase; disulfide bridges, glutathione biosynthesis, beta-hairpin, redox regulation; HET: GLU; 2.09A {Brassica juncea} PDB: 2gwc_A* | Back alignment and structure |
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>1va6_A (A:19-156,A:243-337,A:461-481) Glutamate--cysteine ligase; glutathione homeostasis, beta barrel, peptide synthesis, transition state analogue; HET: P2S ADP P6G; 2.10A {Escherichia coli} | Back alignment and structure |
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>2d3a_A (A:105-356) Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A* | Back alignment and structure |
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