HHsearch alignment for GI: 254780503 and conserved domain: COG0174
>COG0174 GlnA Glutamine synthetase [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=910.45 Aligned_cols=426 Identities=39% Similarity=0.636 Sum_probs=389.7
Q ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHH----HHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 9899999997179839999997889833126761988----730156773610000024277434665557788877899
Q gi|254780503|r 16 NWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSK----FISNIPLTVPSAIYRHTISGESLHSPYLFHNERDGDLRL 91 (461)
Q Consensus 16 ~~~~v~~~l~~~~I~~V~v~~~Dl~G~~RgK~vp~~~----f~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~l 91 (461)
T Consensus 2 ~~~~~~~~~~~~~v~~v~~~f~D~~G~~r~k~~p~~~~~~~~~~~~~~-------g~~fdgss~~g---~~~i~~sDm~l 71 (443)
T COG0174 2 TKEDVLKLLKENGVKFVDLRFTDLNGVLRGKTIPAEKPVSVLAQLFEG-------GVVFDGSSIAG---FEGIGESDMVL 71 (443)
T ss_pred CHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEECCCCHHHHHHHHCC-------CCCCCCCCCCC---CCCCCCCCEEE
T ss_conf 178899998728936999999779997622698665532677764305-------86768864124---67789888699
Q ss_pred EEECCCCEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-EEECCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 96001245387888770999974033575212342577789999986102764-02322441799821678888777877
Q gi|254780503|r 92 SPDLSTLSIVPWEMDPTAQIVCDVVDYNGKEVTYTPRNVLKRVLNFYAQNELK-PIIAPEIEFYLIAKNEDPDYPLQPPK 170 (461)
Q Consensus 92 ~PD~~Tl~~lPw~~~~~a~vl~~~~~~dG~p~~~~PR~iLkr~i~~l~~~G~~-~~~g~E~EF~L~~~~~~~~~~~~~~~ 170 (461)
T Consensus 72 ~Pd~~T~~~~Pw~~~~ta~v~cdv~~~~g~p~~~dPR~vlkr~~~~l~~~G~~~~~~g~E~EFfLfd~~~~~~~~----- 146 (443)
T COG0174 72 KPDLSTLVVDPWREGPTARVLCDVYDPDGTPYPRDPRSVLKRALARLKDEGLAPAVVGPELEFFLFDRDGRDPDG----- 146 (443)
T ss_pred EECCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCEEEEEEECCCCCCCC-----
T ss_conf 626675276777788727999998879999589883999999999998668854302024169996036677666-----
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88887766787777665442899999899767863110221010127864201112665211378999999999999863
Q gi|254780503|r 171 GRSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPAQFEINIRHGDPLKLADQVFLFKRTIREAAFK 250 (461)
Q Consensus 171 ~~~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~gpGQ~Ei~~~~~~~l~aaD~~~~~k~~ik~vA~~ 250 (461)
T Consensus 147 ---~~~~~~g~yf~~~~~~~~~d~~~~i~~~l~~~Gi~ie~~hhEva~gQ~EI~~~~~~~l~~AD~~~~~K~vvk~vA~~ 223 (443)
T COG0174 147 ---GRPADKGGYFDVAPLDEAEDFRRDIVEALEAAGIEIEAIHHEVAPGQFEINLRFDDALKAADQIVIFKYVVKEVAEK 223 (443)
T ss_pred ---CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf ---76688776467654222789999999999987998263014505885578337878899989999999999999999
Q ss_pred HCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH-HC
Q ss_conf 06603311232113566268999876313687423358865--5215666545777642232122207661013442-04
Q gi|254780503|r 251 HDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNPDG--SETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRL-VL 327 (461)
Q Consensus 251 ~G~~atFmpKP~~~~~GsG~H~h~SL~d~~~g~n~f~~~~~--~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl-~p 327 (461)
T Consensus 224 hG~~aTFMpKP~~g~~GsGmH~H~Sl~~~dg~-n~F~d~~~~~~lS~~~~~~igGilkha~~~~ai~~PtvNSYkRl~vp 302 (443)
T COG0174 224 HGLTATFMPKPFFGDNGSGMHVHQSLWDKDGG-NLFADEDGYAGLSETALHFIGGILKHAPALTAITAPTVNSYKRLGVP 302 (443)
T ss_pred HCCEEEEECCCCCCCCCCCEEEEEEEECCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCC
T ss_conf 59859994787789997730489877648997-52048888525799999999999987898676757775104214898
Q ss_pred CCCCCCCCCCCCCCCCEEEEECCC--CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH---
Q ss_conf 655754334243345003650223--886520353035877998999999999999989846888743345300031---
Q gi|254780503|r 328 DMGCPVNNAWGYDNRTTAFRIPFS--DAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSANQEA--- 402 (461)
Q Consensus 328 ~~~ap~~~~WG~~NR~~~iRip~~--~~~~~riE~R~~d~~aNPYL~laail~agl~Gi~~~l~p~~~~~~~~~~~~--- 402 (461)
T Consensus 303 ~e~AP~~~~wg~~NRsa~iRIP~~~~~~~~~RiE~R~pdp~aNPYLa~AaiL~agldGI~~ki~p~~p~~~n~y~~~~~e 382 (443)
T COG0174 303 YEWAPTYIAWGVRNRSASVRIPASGANGKARRVEFRVPDPDANPYLAFAAILAAGLDGIENKLEPGEPVDGNLYELSPEE 382 (443)
T ss_pred CCCCCCHHCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
T ss_conf 55586111003477515799578887777644576479998898999999999999777547999874456432289545
Q ss_pred ---HCCCCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf ---1047898999999865989887355899999999999999998638997899876317
Q gi|254780503|r 403 ---INLPRGLLEAVTLLENTSHFKDIFGSQFIDMYANLKRNEFETFMQVISPWEREFLLLN 460 (461)
Q Consensus 403 ---~~LP~sL~eAl~~l~~d~~l~~~lg~~~v~~~~~~k~~E~~~~~~~vt~wE~~~yl~~ 460 (461)
T Consensus 383 ~~~~~LP~sL~eAl~~l~~~~~~~~~lge~~~~~yi~~K~~E~~~~~~~v~~wE~~~yl~~ 443 (443)
T COG0174 383 RKEPTLPASLREALDALEDSEFLREALGEDFIDAYIALKRAEWEEFRSRVTPWEFERYLSV 443 (443)
T ss_pred HCCCCCCCCHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
T ss_conf 2335676269999998620568887628499999999999999999725999999988529