HHsearch alignment for GI: 254780503 and conserved domain: COG2170
>COG2170 Uncharacterized conserved protein [Function unknown].
Probab=98.02 E-value=6.7e-05 Score=52.08 Aligned_cols=214 Identities=20% Similarity=0.286 Sum_probs=121.6
Q ss_pred CEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCE
Q ss_conf 40232244179982167888877787788887766787777665442899999899767863110221010127864201
Q gi|254780503|r 144 KPIIAPEIEFYLIAKNEDPDYPLQPPKGRSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPAQFEI 223 (461)
Q Consensus 144 ~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~gpGQ~Ei 223 (461)
T Consensus 2 ~ltlGvE~E~~lvd~~g----------------------~dl~~~--s~~ii~~~~~~-----~~~~~~~~e~~e~~vE~ 52 (369)
T COG2170 2 RLTLGVELEFQLVDPQG----------------------YDLVGS--SDAIIEALKGK-----VTAGHLKHEITESTVEL 52 (369)
T ss_pred CCCCCEEEEEEECCCCC----------------------CCCCCC--CHHHHHHCCCC-----CCCCCHHHHHHHHHHCC
T ss_conf 96653379999607777----------------------666454--17899853788-----88751168888774303
Q ss_pred EECCCC-CHHHHHHHHHHHHHHHHHHHHHCCCEEE-CCCCCCCC-----CCHHHHHHHHHHHCC---CCCCCCCCC---C
Q ss_conf 112665-2113789999999999998630660331-12321135-----662689998763136---874233588---6
Q gi|254780503|r 224 NIRHGD-PLKLADQVFLFKRTIREAAFKHDIYATF-MAKPMQNY-----PGSAMHIHQSVLDIK---SNQNIFSNP---D 290 (461)
Q Consensus 224 ~~~~~~-~l~aaD~~~~~k~~ik~vA~~~G~~atF-mpKP~~~~-----~GsG~H~h~SL~d~~---~g~n~f~~~---~ 290 (461)
T Consensus 53 ~t~vc~~~~eA~~~~r~~r~~l~q~a~d~gL~~~~~GtHPfadw~~~~~~~~p-rY~-~~ie~~~y~~~q~~v~G~HVHV 130 (369)
T COG2170 53 ATGVCRLLAEAAAQLRALRDYLVQAASDHGLRICGGGTHPFADWRRQEVPDNP-RYQ-RLIERTGYLGRQMTVAGQHVHV 130 (369)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHCCCCCCH-HHH-HHHHHHHHHHHHEEEEEEEEEE
T ss_conf 40366659999999999999999974423803323678850255652478872-399-9999851677621564577883
Q ss_pred C-CCHHHHHHHHHHHHHHHHHHHHHCCCCC---------HHHHHHH----CCC-CCCCCCCCCC--------------CC
Q ss_conf 5-5215666545777642232122207661---------0134420----465-5754334243--------------34
Q gi|254780503|r 291 G-SETDNFRYFIGGLQKYIPNALVMLAPYG---------NSYRRLV----LDM-GCPVNNAWGY--------------DN 341 (461)
Q Consensus 291 ~-~ls~~~~~fiaGil~h~~al~a~~~Ptv---------NSYkRl~----p~~-~ap~~~~WG~--------------~N 341 (461)
T Consensus 131 Gi~~~d~~~~~l~~l~~~~PhlLALSASSPf~~G~dTGyAS~R~~if~~~P~~g~pp~f~sw~~f~~~~~~~~~tG~I~~ 210 (369)
T COG2170 131 GIPSPDDAMYLLHRLLRYVPHLLALSASSPFWQGTDTGYASARANIFSQLPTNGLPPAFQSWAAFEAFFRDQLETGTIDS 210 (369)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 68988999999998876505887650378531673231356557663207767999651688999999999887364144
Q ss_pred CC---EEEEECCCCCCCCEEEEECCCCCCCHH--HHHHHHHHHHHHHHHHCCCCC
Q ss_conf 50---036502238865203530358779989--999999999999898468887
Q gi|254780503|r 342 RT---TAFRIPFSDAKTKRIENRLPSSDTNPY--LVLAASLACGLLGILQKIEPT 391 (461)
Q Consensus 342 R~---~~iRip~~~~~~~riE~R~~d~~aNPY--L~laail~agl~Gi~~~l~p~ 391 (461)
T Consensus 211 ~~~lwwdIR-P--sph~gTlEvRi~D~~~~l~~~~aivaL~~Alv~~ll~~~d~~ 262 (369)
T COG2170 211 MGDLWWDIR-P--SPHLGTLEVRICDTVLNLAELLAIVALIHALVVWLLRRRDAD 262 (369)
T ss_pred CCCEEEECC-C--CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 663378613-6--887782588844787999999999999999999996388999