HHsearch alignment of GI: 254780503 and MMDB domain: 1r8g_A_
>1r8g_A (A:) Hypothetical protein YBDK; structural genomics, unknown function, carboxylate-amine ligase, structure 2 function project, S2F; 2.15A {Escherichia coli}
Probab=98.30 E-value=2.5e-06 Score=61.10 Aligned_cols=201 Identities=15% Similarity=0.127 Sum_probs=114.7
Q ss_pred CCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC
Q ss_conf 76402322441799821678888777877888877667877776654428999998997678631102210101278642
Q gi|254780503|r 142 ELKPIIAPEIEFYLIAKNEDPDYPLQPPKGRSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPAQF 221 (461)
Q Consensus 142 G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~gpGQ~ 221 (461)
+=...+|+|.|+++++.+..... .....++..+.... .-..+..|.+..|.
T Consensus 9 ~~~~~~GiE~E~~~Vd~~~~~~~------------------------~~~~~ll~~l~~~~-----~~~~i~~E~~~~~i 59 (372)
T 1r8g_A 9 SEPFTLGIELEXQVVNPPGYDLS------------------------QDSSXLIDAVKNKI-----TAGEVKHDITESXL 59 (372)
T ss_dssp CCTTCEEEEEEEEEEETTTTEEC------------------------SCCHHHHTTTSSSC-----SSSEEEECSSSSEE
T ss_pred CCCCCEEEEEEEEEECCCCCCCC------------------------CCHHHHHHHHHCCC-----CCCCCCCCCCCCEE
T ss_conf 99983488876632679987767------------------------75699999732324-----68861103777369
Q ss_pred CEEECCC-CCHHHHHHHHHHHHHHHHHHHHHCCCEE---ECCCCCC-----------------------CCCCHHHHHHH
Q ss_conf 0111266-5211378999999999999863066033---1123211-----------------------35662689998
Q gi|254780503|r 222 EINIRHG-DPLKLADQVFLFKRTIREAAFKHDIYAT---FMAKPMQ-----------------------NYPGSAMHIHQ 274 (461)
Q Consensus 222 Ei~~~~~-~~l~aaD~~~~~k~~ik~vA~~~G~~at---FmpKP~~-----------------------~~~GsG~H~h~ 274 (461)
|++..+. ++-.+.+.+...+..+.+++.++|+... +.|+.-. ...-+|+|+|+
T Consensus 60 El~t~p~~~~~~~~~~l~~~~~~l~~~~~~~g~~l~~~g~~P~~~~~~~~~~~~~rY~~~~~~~~~~~~~~~~~g~hvn~ 139 (372)
T 1r8g_A 60 ELATDVCRDINQAAGQFSAXQKVVLQAATDHHLEICGGGTHPFQKWQRQEVCDNERYQRTLENFGYLIQQATVFGQHVHV 139 (372)
T ss_dssp EEECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCSBCSSCCC----------------CCGGGGCSCCBCEEEEEE
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCEEEC
T ss_conf 97487879999999999999999999876516612435789789832134676078999998605288774001524755
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC---------HHHHHHHCCCC-----CCCCCCCCC-
Q ss_conf 763136874233588655215666545777642232122207661---------01344204655-----754334243-
Q gi|254780503|r 275 SVLDIKSNQNIFSNPDGSETDNFRYFIGGLQKYIPNALVMLAPYG---------NSYRRLVLDMG-----CPVNNAWGY- 339 (461)
Q Consensus 275 SL~d~~~g~n~f~~~~~~ls~~~~~fiaGil~h~~al~a~~~Ptv---------NSYkRl~p~~~-----ap~~~~WG~- 339 (461)
|+-|. +..-+-+-.+..++|.+.+|++.+. -|||-..=+.+ -+.+-+|..
T Consensus 140 ~~~~~---------------~~~~~~~~~~~~~~p~l~aL~anSP~~~G~~tg~~S~R~~~~~~~~~~~~~~~~~~~~~~ 204 (372)
T 1r8g_A 140 GCASG---------------DDAIYLLHGLSRFVPHFIALSAASPYXQGTDTRFASSRPNIFSAFPDNGPXPWVSNWQQF 204 (372)
T ss_dssp ECSSH---------------HHHHHHHHHHHTTHHHHHHHHCCBCEETTEECSCSBCGGGGGTTSTTCSSCCCCSSHHHH
T ss_pred CCCCH---------------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH
T ss_conf 88999---------------999999999999989999986389000599885431057887218676887545663778
Q ss_pred ------CCCCEEEEEC-------CCCCCCCEEEEECCCCCCCH--HHHHHHHHHHHHHHHHH
Q ss_conf ------3450036502-------23886520353035877998--99999999999998984
Q gi|254780503|r 340 ------DNRTTAFRIP-------FSDAKTKRIENRLPSSDTNP--YLVLAASLACGLLGILQ 386 (461)
Q Consensus 340 ------~NR~~~iRip-------~~~~~~~riE~R~~d~~aNP--YL~laail~agl~Gi~~ 386 (461)
--++..+... ...+...+||+|++|....+ +++.++.+.+-+.....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~vr~~~~~~~iE~R~~D~~p~~~~~~~~~af~~~l~~~~~~ 266 (372)
T 1r8g_A 205 EALFRCLSYTTXIDSIKDLHWDIRPSPHFGTVEVRVXDTPLTLSHAVNXAGLIQATAHWLLT 266 (372)
T ss_dssp HHHHHHHTTSSSCSSGGGCCCSEEEETTTTEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999875246011355412205777666645334678999889999999999999999987