HHSEARCH alignment of GI: 254780503 and SCOP domain: d1f52a1

Alignment
>d1f52a1 d.15.9.1 (A:1-100) Glutamine synthetase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=99.82  E-value=1.6e-20  Score=151.80  Aligned_cols=98  Identities=21%  Similarity=0.315  Sum_probs=83.7

Q ss_pred             CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             989999999717983999999788983312676198873015-6773610000024277434665557788877899960
Q gi|254780503|r   16 NWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISNI-PLTVPSAIYRHTISGESLHSPYLFHNERDGDLRLSPD   94 (461)
Q Consensus        16 ~~~~v~~~l~~~~I~~V~v~~~Dl~G~~RgK~vp~~~f~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~l~PD   94 (461)
                      +.++++++|++++|++|+++|+|++|++|||+||+++|.+.. ..|       ..++++++.+   +...+++|++++||
T Consensus         1 s~e~i~~~i~~~~I~~V~~~F~D~~G~~~~k~ip~~~~~~~~~~~g-------~~~d~ss~~~---~~~~~~sDm~l~PD   70 (100)
T d1f52a1           1 SAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEG-------KMFDGSSIGG---WKGINESDMVLMPD   70 (100)
T ss_dssp             CHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHC-------EEEEGGGSTT---SCCSSCCEEEEEEC
T ss_pred             CHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHCCC-------CEECCCCHHH---HCCCCCCCEEEEEC
T ss_conf             9899999999889959999998799866689986899658985468-------3222452111---00113574899877


Q ss_pred             CCCCEECCCCCCCEEEEEEECCCCC-CCCC
Q ss_conf             0124538788877099997403357-5212
Q gi|254780503|r   95 LSTLSIVPWEMDPTAQIVCDVVDYN-GKEV  123 (461)
Q Consensus        95 ~~Tl~~lPw~~~~~a~vl~~~~~~d-G~p~  123 (461)
                      ++|++++||..+++++|+||+++++ |+|+
T Consensus        71 ~~T~~i~Pw~~~~ta~v~CDv~~p~tg~py  100 (100)
T d1f52a1          71 ASTAVIDPFFADSTLIIRCDILEPGTLQGY  100 (100)
T ss_dssp             GGGCEECSSCSSCEEEEEEEEECTTTCCCC
T ss_pred             CCCEEECCCCCCCEEEEEEEEECCCCCCCC
T ss_conf             780699886899869999998359999979


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: Glutamine synthetase, N-terminal domain
family: Glutamine synthetase, N-terminal domain
domain: Glutamine synthetase, N-terminal domain
species: Salmonella typhimurium [TaxId: 90371]