HHsearch alignment of GI: 254780504 and MMDB domain: 1oi7_A_1-122
>1oi7_A (A:1-122) Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus}
Probab=92.91 E-value=0.43 Score=27.35 Aligned_cols=108 Identities=7% Similarity=-0.017 Sum_probs=69.8
Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
Q ss_conf 98789986443566765779999999728987578179999888699889999999999874234679989999898516
Q gi|254780504|r 10 NSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLI 89 (492)
Q Consensus 10 ~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~ 89 (492)
+-.+.|.|++|--.+. .+|++-+. + ++.|+|+..++...+.+
T Consensus 7 ~iri~iiG~gg~~g~~-~~~~~~~~------~--~~~i~~v~~~~~~~~~~----------------------------- 48 (122)
T 1oi7_A 7 ETRVLVQGITGREGQF-HTKQMLTY------G--TKIVAGVTPGKGGMEVL----------------------------- 48 (122)
T ss_dssp TCEEEEETTTSHHHHH-HHHHHHHH------T--CEEEEEECTTCTTCEET-----------------------------
T ss_pred CCEEEEECCCCCHHHH-HHHHHHHH------C--CCEEEEECCCCCCCEEE-----------------------------
T ss_conf 9849998998858789-99999980------9--95799864898863787-----------------------------
Q ss_pred CEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 57864678977899888874057678469984069568666777777725876443577605667898899999999987
Q gi|254780504|r 90 FYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRK 169 (492)
Q Consensus 90 ~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~ 169 (492)
+...-.+++.+... .+. =+.++++||..=..++...-+.| ..+++|||+|.+.+.+++|-+...+
T Consensus 49 -----~~~~~~~~~~~~~~---~~v--D~v~i~t~~~~h~~~~~~~~~~g-----~~v~~ekP~~~~~~~~~~l~~~a~~ 113 (122)
T 1oi7_A 49 -----GVPVYDTVKEAVAH---HEV--DASIIFVPAPAAADAALEAAHAG-----IPLIVLITEGIPTLDMVRAVEEIKA 113 (122)
T ss_dssp -----TEEEESSHHHHHHH---SCC--SEEEECCCHHHHHHHHHHHHHTT-----CSEEEECCSCCCHHHHHHHHHHHHH
T ss_pred -----CCCCCCCHHHHHCC---CCC--CEEEEECCHHHHHHHHHHHHHCC-----CCEEEEECCCCCCCCHHHHHHHHHC
T ss_conf -----92034746774346---787--67999627899999999998679-----9889996799873356789986515
Q ss_pred H
Q ss_conf 3
Q gi|254780504|r 170 I 170 (492)
Q Consensus 170 ~ 170 (492)
.
T Consensus 114 ~ 114 (122)
T 1oi7_A 114 L 114 (122)
T ss_dssp H
T ss_pred C
T ss_conf 6