HHsearch results for GI: 254780504 and protein with PDBid: 1tlt_A

>1tlt_A Putative oxidoreductase (virulence factor MVIM homolog); structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.05  E-value=0.0073  Score=38.94  Aligned_cols=175  Identities=14%  Similarity=0.151  Sum_probs=93.9

Q ss_pred             CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
Q ss_conf             87899864435667657799999997289875781799998886998899999999998742346799899998985165
Q gi|254780504|r   11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF   90 (492)
Q Consensus        11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~   90 (492)
                      -.+-|.|+ |.-+++-.+|+|-      ..+  ++.|+|+.-.+...                        .++|.+...
T Consensus         6 ikigiiG~-G~~~~~~~~~~l~------~~~--~~~l~av~d~~~~~------------------------~~~~~~~~~   52 (319)
T 1tlt_A            6 LRIGVVGL-GGIAQKAWLPVLA------AAS--DWTLQGAWSPTRAK------------------------ALPICESWR   52 (319)
T ss_dssp             EEEEEECC-STHHHHTHHHHHH------SCS--SEEEEEEECSSCTT------------------------HHHHHHHHT
T ss_pred             CEEEEEEC-CHHHHHHHHHHHH------HCC--CCEEEEEECCCHHH------------------------HHHHHHHHC
T ss_conf             88999938-8999999999997------399--96899998899999------------------------999999829


Q ss_pred             EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             78646789778998888740576784699840695686667777777258764435776056678988999999999873
Q gi|254780504|r   91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI  170 (492)
Q Consensus        91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~  170 (492)
                       ++ -+++   ++.|.+     +. . +.|.++||..=..++...-++|     .-|.+|||++.|++.|++|.+...+.
T Consensus        53 -~~-~~~~---~~~l~~-----~~-D-~V~I~tp~~~H~~~~~~al~~g-----khv~~EKP~~~~~~e~~~l~~~~~~~  115 (319)
T 1tlt_A           53 -IP-YADS---LSSLAA-----SC-D-AVFVHSSTASHFDVVSTLLNAG-----VHVCVDKPLAENLRDAERLVELAARK  115 (319)
T ss_dssp             -CC-BCSS---HHHHHT-----TC-S-EEEECSCTTHHHHHHHHHHHTT-----CEEEEESSSCSSHHHHHHHHHHHHHT
T ss_pred             -CC-CCCC---HHHHHC-----CC-C-EEEEECCCHHHHHHHHHHHHCC-----CEEEEECCCHHHHHHHHHHHHHHHHC
T ss_conf             -98-2288---999856-----99-9-9999488666689999998619-----87999636502466777777776503


Q ss_pred             CCHHHEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             89688351242012568777788774775200252803330799999846770245555322001788765589999999
Q gi|254780504|r  171 FKESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLCL  250 (492)
Q Consensus       171 f~E~qiyRIDHYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHllQlL~l  250 (492)
                         .-.+-+-|           ..||. +.+.-+  ++.|++-++---+..- ..+...++..|++.|+. -|.+-++..
T Consensus       116 ---~~~~~v~~-----------~~r~~-p~~~~~--k~~i~~g~~g~i~~~r-~~~~~~~~~~~~l~d~~-~H~iDl~~~  176 (319)
T 1tlt_A          116 ---KLTLMVGF-----------NRRFA-PLYGEL--KTQLATAASLRMDKHR-SNSVGPHDLYFTLLDDY-LHVVDTALW  176 (319)
T ss_dssp             ---TCCEEEEC-----------GGGGC-HHHHHH--TTTGGGCCEEEEEECC-SSCCCSSCHHHHHHHTH-HHHHHHHHH
T ss_pred             ---CCEEEEEE-----------CCCCC-HHHHHH--HHHHHHCCCCEEEEEE-CCCCCCCCCCCCCHHCC-CHHHHHHHH
T ss_conf             ---63168863-----------13468-699999--9999734562599997-36779998774125204-359999999


Q ss_pred             HHCC
Q ss_conf             8718
Q gi|254780504|r  251 VAME  254 (492)
Q Consensus       251 vAMe  254 (492)
                      +.-+
T Consensus       177 l~g~  180 (319)
T 1tlt_A          177 LSGG  180 (319)
T ss_dssp             HTTT
T ss_pred             HCCC
T ss_conf             6199