HHsearch results for GI: 254780504 and protein with PDBid: 1tlt_A
>1tlt_A Putative oxidoreductase (virulence factor MVIM homolog); structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.05 E-value=0.0073 Score=38.94 Aligned_cols=175 Identities=14% Similarity=0.151 Sum_probs=93.9
Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165
Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492)
Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492)
-.+-|.|+ |.-+++-.+|+|- ..+ ++.|+|+.-.+... .++|.+...
T Consensus 6 ikigiiG~-G~~~~~~~~~~l~------~~~--~~~l~av~d~~~~~------------------------~~~~~~~~~ 52 (319)
T 1tlt_A 6 LRIGVVGL-GGIAQKAWLPVLA------AAS--DWTLQGAWSPTRAK------------------------ALPICESWR 52 (319)
T ss_dssp EEEEEECC-STHHHHTHHHHHH------SCS--SEEEEEEECSSCTT------------------------HHHHHHHHT
T ss_pred CEEEEEEC-CHHHHHHHHHHHH------HCC--CCEEEEEECCCHHH------------------------HHHHHHHHC
T ss_conf 88999938-8999999999997------399--96899998899999------------------------999999829
Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 78646789778998888740576784699840695686667777777258764435776056678988999999999873
Q gi|254780504|r 91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492)
Q Consensus 91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492)
++ -+++ ++.|.+ +. . +.|.++||..=..++...-++| .-|.+|||++.|++.|++|.+...+.
T Consensus 53 -~~-~~~~---~~~l~~-----~~-D-~V~I~tp~~~H~~~~~~al~~g-----khv~~EKP~~~~~~e~~~l~~~~~~~ 115 (319)
T 1tlt_A 53 -IP-YADS---LSSLAA-----SC-D-AVFVHSSTASHFDVVSTLLNAG-----VHVCVDKPLAENLRDAERLVELAARK 115 (319)
T ss_dssp -CC-BCSS---HHHHHT-----TC-S-EEEECSCTTHHHHHHHHHHHTT-----CEEEEESSSCSSHHHHHHHHHHHHHT
T ss_pred -CC-CCCC---HHHHHC-----CC-C-EEEEECCCHHHHHHHHHHHHCC-----CEEEEECCCHHHHHHHHHHHHHHHHC
T ss_conf -98-2288---999856-----99-9-9999488666689999998619-----87999636502466777777776503
Q ss_pred CCHHHEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89688351242012568777788774775200252803330799999846770245555322001788765589999999
Q gi|254780504|r 171 FKESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLCL 250 (492)
Q Consensus 171 f~E~qiyRIDHYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHllQlL~l 250 (492)
.-.+-+-| ..||. +.+.-+ ++.|++-++---+..- ..+...++..|++.|+. -|.+-++..
T Consensus 116 ---~~~~~v~~-----------~~r~~-p~~~~~--k~~i~~g~~g~i~~~r-~~~~~~~~~~~~l~d~~-~H~iDl~~~ 176 (319)
T 1tlt_A 116 ---KLTLMVGF-----------NRRFA-PLYGEL--KTQLATAASLRMDKHR-SNSVGPHDLYFTLLDDY-LHVVDTALW 176 (319)
T ss_dssp ---TCCEEEEC-----------GGGGC-HHHHHH--TTTGGGCCEEEEEECC-SSCCCSSCHHHHHHHTH-HHHHHHHHH
T ss_pred ---CCEEEEEE-----------CCCCC-HHHHHH--HHHHHHCCCCEEEEEE-CCCCCCCCCCCCCHHCC-CHHHHHHHH
T ss_conf ---63168863-----------13468-699999--9999734562599997-36779998774125204-359999999
Q ss_pred HHCC
Q ss_conf 8718
Q gi|254780504|r 251 VAME 254 (492)
Q Consensus 251 vAMe 254 (492)
+.-+
T Consensus 177 l~g~ 180 (319)
T 1tlt_A 177 LSGG 180 (319)
T ss_dssp HTTT
T ss_pred HCCC
T ss_conf 6199