HHsearch results for GI: 254780504 and protein with PDBid: 2nvw_A
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.44 E-value=0.0032 Score=41.52 Aligned_cols=205 Identities=10% Similarity=0.093 Sum_probs=106.7
Q ss_pred CCCCCCCEEEECCCC--HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf 989898789986443--566765779999999728987578179999888699889999999999874234679989999
Q gi|254780504|r 6 PNIHNSDFIIFGGTG--DLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQ 83 (492)
Q Consensus 6 p~~~~~~lVIFGATG--DLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~ 83 (492)
|+..|--+-|.|+++ -.+.+.-+|||..+ +. .+.|++++-++ .+. .+
T Consensus 35 p~~~piRvGiIG~G~~~g~~~~~H~~al~~~------~~-~~elvAv~d~~--~e~----------------------a~ 83 (479)
T 2nvw_A 35 PSSRPIRVGFVGLTSGKSWVAKTHFLAIQQL------SS-QFQIVALYNPT--LKS----------------------SL 83 (479)
T ss_dssp GGGCCEEEEEECCCSTTSHHHHTHHHHHHHT------TT-TEEEEEEECSC--HHH----------------------HH
T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHHHC------CC-CEEEEEEECCC--HHH----------------------HH
T ss_conf 9999727999968987647999999999837------98-87999998899--999----------------------99
Q ss_pred HHHHHCCEEEC-CCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC-CCEEEEECCCCCCHHHHH
Q ss_conf 89851657864-6789778998888740576784699840695686667777777258764-435776056678988999
Q gi|254780504|r 84 KFLSLIFYINL-DVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTE-HTRVVLEKPIGSNLSSAQ 161 (492)
Q Consensus 84 ~F~~~~~Y~~~-d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~-~~RiViEKPFG~Dl~SA~ 161 (492)
++.+++..-.. -|+ +|+.| ++..+ .=+.+.++||..=..++...-++|+... ..-|.+|||++.+++.|+
T Consensus 84 ~~a~~~g~~~~~~y~---d~~el---l~~~~--vD~V~I~tp~~~H~~~~~~Al~aG~~~~~~KhV~~EKPla~~~~ea~ 155 (479)
T 2nvw_A 84 QTIEQLQLKHATGFD---SLESF---AQYKD--IDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAE 155 (479)
T ss_dssp HHHHHTTCTTCEEES---CHHHH---HHCTT--CSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHH
T ss_pred HHHHHHCCCCCCCCC---CHHHH---HCCCC--CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHH
T ss_conf 999985889774469---99999---55999--98899949827899999999982954356873899267531056679
Q ss_pred HHHHHHHHHCCHHHEEECCCHH-HHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCC-----CHHHHHHHH---H
Q ss_conf 9999998738968835124201-256877778877477520025280333079999984677-----024555532---2
Q gi|254780504|r 162 EIHAITRKIFKESQIFRIDHYL-GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIG-----VEDRVDYYN---N 232 (492)
Q Consensus 162 eLn~~l~~~f~E~qiyRIDHYL-GKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~g-----vegR~~yyD---~ 232 (492)
+|-+...+.= .-.+-+.|-+ --+.++-+--+--.+.+=+ |-+|++......- .....-++| .
T Consensus 156 ~l~~~a~~~~--~v~~~v~~~~R~~p~~~~~k~li~~G~iG~-------i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~g 226 (479)
T 2nvw_A 156 ELYSISQQRA--NLQTIICLQGRKSPYIVRAKELISEGCIGD-------INSIEISGNGGWYGYERPMRSPEYLYDIESG 226 (479)
T ss_dssp HHHHHHHTCT--TCEEEEECGGGGCHHHHHHHHHHHTTTTCS-------EEEEEEEEECSBSSSEEETTCCGGGGCGGGS
T ss_pred HHHHHHHHCC--CCEEEEEEEEECCCHHHHHHHHHHCCCCCC-------EEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999976325--420330033212731789999997699898-------5999999625746655767780202362358
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 001788765589999999871854458
Q gi|254780504|r 233 TGALRDMIQNHLLQLLCLVAMEMPPSV 259 (492)
Q Consensus 233 ~GaiRDmvQNHllQlL~lvAMe~P~~~ 259 (492)
-|++-|+. .|.+.++..+.=++|.+.
T Consensus 227 gg~l~d~g-~H~iD~~~~l~G~~~~~V 252 (479)
T 2nvw_A 227 VNLISNSF-GHTIDVLQYITGSYFQKI 252 (479)
T ss_dssp CSTTTTHH-HHHHHHHHHHHTCCEEEE
T ss_pred CEEEECCH-HHHHHHHHHHHCCCCEEE
T ss_conf 50440407-779999999829995399