HHsearch results for GI: 254780504 and protein with PDBid: 2nvw_A

>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=97.44  E-value=0.0032  Score=41.52  Aligned_cols=205  Identities=10%  Similarity=0.093  Sum_probs=106.7

Q ss_pred             CCCCCCCEEEECCCC--HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH
Q ss_conf             989898789986443--566765779999999728987578179999888699889999999999874234679989999
Q gi|254780504|r    6 PNIHNSDFIIFGGTG--DLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQ   83 (492)
Q Consensus         6 p~~~~~~lVIFGATG--DLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~   83 (492)
                      |+..|--+-|.|+++  -.+.+.-+|||..+      +. .+.|++++-++  .+.                      .+
T Consensus        35 p~~~piRvGiIG~G~~~g~~~~~H~~al~~~------~~-~~elvAv~d~~--~e~----------------------a~   83 (479)
T 2nvw_A           35 PSSRPIRVGFVGLTSGKSWVAKTHFLAIQQL------SS-QFQIVALYNPT--LKS----------------------SL   83 (479)
T ss_dssp             GGGCCEEEEEECCCSTTSHHHHTHHHHHHHT------TT-TEEEEEEECSC--HHH----------------------HH
T ss_pred             CCCCCCEEEEECCCCCCCHHHHHHHHHHHHC------CC-CEEEEEEECCC--HHH----------------------HH
T ss_conf             9999727999968987647999999999837------98-87999998899--999----------------------99


Q ss_pred             HHHHHCCEEEC-CCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC-CCEEEEECCCCCCHHHHH
Q ss_conf             89851657864-6789778998888740576784699840695686667777777258764-435776056678988999
Q gi|254780504|r   84 KFLSLIFYINL-DVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTE-HTRVVLEKPIGSNLSSAQ  161 (492)
Q Consensus        84 ~F~~~~~Y~~~-d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~-~~RiViEKPFG~Dl~SA~  161 (492)
                      ++.+++..-.. -|+   +|+.|   ++..+  .=+.+.++||..=..++...-++|+... ..-|.+|||++.+++.|+
T Consensus        84 ~~a~~~g~~~~~~y~---d~~el---l~~~~--vD~V~I~tp~~~H~~~~~~Al~aG~~~~~~KhV~~EKPla~~~~ea~  155 (479)
T 2nvw_A           84 QTIEQLQLKHATGFD---SLESF---AQYKD--IDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAE  155 (479)
T ss_dssp             HHHHHTTCTTCEEES---CHHHH---HHCTT--CSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHH
T ss_pred             HHHHHHCCCCCCCCC---CHHHH---HCCCC--CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHH
T ss_conf             999985889774469---99999---55999--98899949827899999999982954356873899267531056679


Q ss_pred             HHHHHHHHHCCHHHEEECCCHH-HHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCC-----CHHHHHHHH---H
Q ss_conf             9999998738968835124201-256877778877477520025280333079999984677-----024555532---2
Q gi|254780504|r  162 EIHAITRKIFKESQIFRIDHYL-GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIG-----VEDRVDYYN---N  232 (492)
Q Consensus       162 eLn~~l~~~f~E~qiyRIDHYL-GKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~g-----vegR~~yyD---~  232 (492)
                      +|-+...+.=  .-.+-+.|-+ --+.++-+--+--.+.+=+       |-+|++......-     .....-++|   .
T Consensus       156 ~l~~~a~~~~--~v~~~v~~~~R~~p~~~~~k~li~~G~iG~-------i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~g  226 (479)
T 2nvw_A          156 ELYSISQQRA--NLQTIICLQGRKSPYIVRAKELISEGCIGD-------INSIEISGNGGWYGYERPMRSPEYLYDIESG  226 (479)
T ss_dssp             HHHHHHHTCT--TCEEEEECGGGGCHHHHHHHHHHHTTTTCS-------EEEEEEEEECSBSSSEEETTCCGGGGCGGGS
T ss_pred             HHHHHHHHCC--CCEEEEEEEEECCCHHHHHHHHHHCCCCCC-------EEEEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9999976325--420330033212731789999997699898-------5999999625746655767780202362358


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             001788765589999999871854458
Q gi|254780504|r  233 TGALRDMIQNHLLQLLCLVAMEMPPSV  259 (492)
Q Consensus       233 ~GaiRDmvQNHllQlL~lvAMe~P~~~  259 (492)
                      -|++-|+. .|.+.++..+.=++|.+.
T Consensus       227 gg~l~d~g-~H~iD~~~~l~G~~~~~V  252 (479)
T 2nvw_A          227 VNLISNSF-GHTIDVLQYITGSYFQKI  252 (479)
T ss_dssp             CSTTTTHH-HHHHHHHHHHHTCCEEEE
T ss_pred             CEEEECCH-HHHHHHHHHHHCCCCEEE
T ss_conf             50440407-779999999829995399