HHsearch results for GI: 254780504 and protein with PDBid: 3e18_A

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua}
Probab=97.25  E-value=0.015  Score=36.80  Aligned_cols=333  Identities=15%  Similarity=0.151  Sum_probs=155.9

Q ss_pred             CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
Q ss_conf             98987899864435667657799999997289875781799998886998899999999998742346799899998985
Q gi|254780504|r    8 IHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLS   87 (492)
Q Consensus         8 ~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~   87 (492)
                      |....+.|.|+ |.-++ ..+|+|-      ..+  ++.|+|+.-.  +.+. +    +...+   .             
T Consensus         3 mk~~rigiIG~-G~~g~-~h~~~~~------~~~--~~~l~av~d~--~~~~-~----~~~~~---~-------------   49 (359)
T 3e18_A            3 LKKYQLVIVGY-GGMGS-YHVTLAS------AAD--NLEVHGVFDI--LAEK-R----EAAAQ---K-------------   49 (359)
T ss_dssp             CCCEEEEEECC-SHHHH-HHHHHHH------TST--TEEEEEEECS--SHHH-H----HHHHT---T-------------
T ss_pred             CCCCCEEEECC-CHHHH-HHHHHHH------HCC--CCEEEEEECC--CHHH-H----HHHHH---C-------------
T ss_conf             88771999946-79999-9999998------589--9589999889--9999-9----99986---2-------------


Q ss_pred             HCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf             16578646789778998888740576784699840695686667777777258764435776056678988999999999
Q gi|254780504|r   88 LIFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAIT  167 (492)
Q Consensus        88 ~~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l  167 (492)
                      .+.    -|++   |+   ++++..+  .=+.+.++||+.-..++...-++|     .-|.+|||++.|++.|++|-+..
T Consensus        50 ~~~----~~~~---~~---ell~~~~--iD~V~i~tp~~~h~~~~~~al~~g-----khv~~EKP~a~~~~e~~~l~~~~  112 (359)
T 3e18_A           50 GLK----IYES---YE---AVLADEK--VDAVLIATPNDSHKELAISALEAG-----KHVVCEKPVTMTSEDLLAIMDVA  112 (359)
T ss_dssp             TCC----BCSC---HH---HHHHCTT--CCEEEECSCGGGHHHHHHHHHHTT-----CEEEEESSCCSSHHHHHHHHHHH
T ss_pred             CCC----CCCC---HH---HHHCCCC--CCEEEECCCCHHHHHHHHHHHHCC-----CEEEEECCCCCHHHHHHHHHHHH
T ss_conf             997----0199---99---9955999--898998788055235678888539-----81999578642087887889999


Q ss_pred             HHHCCHHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHH--HHHHHHHHHHHHHH
Q ss_conf             87389688351242-0125687777887747752002528033307999998467702455553--22001788765589
Q gi|254780504|r  168 RKIFKESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYY--NNTGALRDMIQNHL  244 (492)
Q Consensus       168 ~~~f~E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yy--D~~GaiRDmvQNHl  244 (492)
                      .+.   ..++-+.| +.--+.+|-+--+--++. +-      -|-+|++...---+..+...+.  .+-|++.|+.- |.
T Consensus       113 ~~~---~~~~~v~~~~r~~p~~~~~k~~i~~g~-iG------~i~~i~~~~~~~~~~~~~w~~~~~~~gg~l~~~g~-H~  181 (359)
T 3e18_A          113 KRV---NKHFMVHQNRRWDEDFLIIKEMFEQKT-IG------EMFHLESRVHGANGIPGDWRHLKAHGGGMVLDWGV-HL  181 (359)
T ss_dssp             HHH---TCCEEEECGGGGCHHHHHHHHHHHHTT-TS------SEEEEEEEEECSSCSCSSGGGCGGGTCSHHHHTHH-HH
T ss_pred             HHC---CCCCCCCCCCCCCCCCHHHHHHHHHCC-CC------CEEEEEEEEECCCCCCCCCCCCCCCCCCEEHHCCC-CC
T ss_conf             752---765422222114752202433212214-78------44899999716888994312441037876003132-21


Q ss_pred             HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             99999987185445885899999999997306888112236136521366776873433410147988664874389999
Q gi|254780504|r  245 LQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLEEIPLGISDTETFVAIKA  324 (492)
Q Consensus       245 lQlL~lvAMe~P~~~~~~~ir~eK~kvlk~~r~~~~~~v~~~~v~GQY~~~~~~~~~v~gY~~e~~v~~S~TeTfaa~~l  324 (492)
                      +-++..+.=++|.+..+                           .+...             .     +..++.++.+.+
T Consensus       182 iD~~~~l~G~~~~~V~a---------------------------~~~~~-------------~-----~~~~~d~~~~~l  216 (359)
T 3e18_A          182 LDQLLFLVDSNVKSVSA---------------------------NLSFA-------------L-----GDEVDDGFVTFI  216 (359)
T ss_dssp             HHHHHHHCCSCEEEEEE---------------------------EEECT-------------T-----CCSSCSEEEEEE
T ss_pred             CHHHHHHCCCCCEEEEE---------------------------EEECC-------------C-----CCCCCCCEEEEE
T ss_conf             02324222998479999---------------------------86525-------------6-----887562147999


Q ss_pred             EECCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCC-CCCCCCCCCCCEEEEEECCCCCE----EEE---EEECCCCC
Q ss_conf             97085867857775513346885179999985488643-76665478985699997179650----444---33126888
Q gi|254780504|r  325 NIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTI-FDHQMSKIETNKLILRLQNNGEI----EQF---ITTKDHST  396 (492)
Q Consensus       325 ~idn~RW~gVPF~lrtGK~l~~k~~eI~i~FK~~p~~~-f~~~~~~~~~N~Lvi~iqP~~~i----~l~---~~~K~pg~  396 (492)
                      .-+|    |+...+.++-.-..+..++.|..-+  +.+ +..    ......+.........    ...   ...+....
T Consensus       217 ~f~~----G~~~~l~~s~~~~~~~~~~~i~Gt~--G~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (359)
T 3e18_A          217 TFEN----GITAQIEVGTTNFIKLPRWYVKGTE--GTGIIHD----WDLSGEIVKPTALAKTSEPTPIKAGQGLTKTMAP  286 (359)
T ss_dssp             EETT----SCEEEEEEESSCSSCCCSEEEEETT--EEEEECS----TTCCEEEEEECTTTTTCCCCCEEETTEEESTTSC
T ss_pred             EECC----CCEEEEEEECCCCCCCCEEEEECCC--CEEEEEC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9789----9399999875667888608999034--5799805----6655325114543446777631146552101356


Q ss_pred             CCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             77445466665530223456898624899999987983358698999984588469999887348
Q gi|254780504|r  397 SNMKLKTTALRICCCSKRIKRTPDGYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIIN  461 (492)
Q Consensus       397 ~~~~~~~~~l~~~~~~~~~~~~pdaYe~Ll~D~i~Gd~tlF~r~dEve~sWrivdpiL~~~~~~~  461 (492)
                      ..... .....  . .........-|+ -+.|+++|+...-+..++...+=++++-+.+..+..+
T Consensus       287 ~~~~~-~~~~~--~-~~~~~~~~~~~~-~f~~aI~~~~~~~~~~edal~~~~i~~a~~~S~~~g~  346 (359)
T 3e18_A          287 PSEEA-TNTLS--L-PAPAKLAPSFYN-NFVDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNR  346 (359)
T ss_dssp             CCGGG-EEEEC--C-CCCCCCCSCHHH-HHHHHHTTSSCCSSCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             CCCCC-CCCCC--C-CCCCHHHHHHHH-HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             44344-43224--5-765326999999-9999995799898999999999999999999997199