HHsearch results for GI: 254780504 and protein with PDBid: 3f4l_A
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.93 E-value=0.028 Score=34.72 Aligned_cols=182 Identities=15% Similarity=0.127 Sum_probs=99.4
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578
Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492)
Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492)
+=|+|+ |--+++..+|++ ..++. .+.+.++.++.-..+.+. + +| .....
T Consensus 5 igiIG~-G~~~~~~hl~~~------~~~~~-~~~v~~v~~~~~~~~~~~-----------~----------~~-~~~~~- 53 (345)
T 3f4l_A 5 CAFIGF-GKSTTRYHLPYV------LNRKD-SWHVAHIFRRHAKPEEQA-----------P----------IY-SHIHF- 53 (345)
T ss_dssp EEEECC-SHHHHHHTHHHH------TTCTT-TEEEEEEECSSCCGGGGS-----------G----------GG-TTCEE-
T ss_pred EEEEEC-CHHHHHHHHHHH------HCCCC-CEEEEEEECCHHHHHHHH-----------H----------HC-CCCCE-
T ss_conf 999956-699999999999------75999-769999989889999999-----------8----------75-99936-
Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389
Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492)
Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492)
+++ +.++++..+ .=+.|.++||..=..++...-++| .-|.+|||++.|++.|++|-+...+.
T Consensus 54 ---~~~------~~ell~~~~--~D~V~I~tp~~~H~~~~~~al~~g-----khV~~EKP~a~~~~e~~~l~~~a~~~-- 115 (345)
T 3f4l_A 54 ---TSD------LDEVLNDPD--VKLVVVCTHADSHFEYAKRALEAG-----KNVLVEKPFTPTLAQAKELFALAKSK-- 115 (345)
T ss_dssp ---ESC------THHHHTCTT--EEEEEECSCGGGHHHHHHHHHHTT-----CEEEECSSSCSSHHHHHHHHHHHHHH--
T ss_pred ---ECC------HHHHHCCCC--CCEEEECCCHHHHHHHHHHHHHCC-----CEEEECCCCHHHHHHHHHHHHCCCCC--
T ss_conf ---799------999956999--988999588699899999999859-----90984343101256665433011236--
Q ss_pred HHHEEECC-CHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 68835124-20125687777887747752002528033307999998467702455553220017887655899999998
Q gi|254780504|r 173 ESQIFRID-HYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLCLV 251 (492)
Q Consensus 173 E~qiyRID-HYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHllQlL~lv 251 (492)
.-...+- ++.--+.+|-+..+-=.+.+- .|.+|+..+.-.-............|++-|+.- |.+-++..+
T Consensus 116 -~~~~~v~~~~r~~p~~~~~k~~i~~g~ig-------~i~~i~~~~~~~~~~~~~~~~~~~gg~l~d~g~-H~id~~~~l 186 (345)
T 3f4l_A 116 -GLTVTPYQNRRFDSCFLTAKKAIESGKLG-------EIVEVESHFDYYRPVAETKPGLPQDGAFYGLGV-HTMDQIISL 186 (345)
T ss_dssp -TCCEEECCGGGGCHHHHHHHHHHHHSTTC-------SEEEEEEECCCBCCCCCCCCCCGGGSHHHHTHH-HHHHHHHHH
T ss_pred -CCCCCCCCCCCCCCHHHHHHHHHCCCCEE-------EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHH
T ss_conf -74320121244572688888760179663-------333322342122233344553335630124551-299999996
Q ss_pred H
Q ss_conf 7
Q gi|254780504|r 252 A 252 (492)
Q Consensus 252 A 252 (492)
.
T Consensus 187 ~ 187 (345)
T 3f4l_A 187 F 187 (345)
T ss_dssp H
T ss_pred H
T ss_conf 0