HHsearch results for GI: 254780504 and protein with PDBid: 3gdo_A

>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.35  E-value=0.051  Score=32.87  Aligned_cols=180  Identities=15%  Similarity=0.135  Sum_probs=94.3

Q ss_pred             CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
Q ss_conf             87899864435667657799999997289875781799998886998899999999998742346799899998985165
Q gi|254780504|r   11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF   90 (492)
Q Consensus        11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~   90 (492)
                      -.+-|.| +|.-+++...|++      ... + .+.|+++.-+.  .+.+.       +++ ..              ..
T Consensus         6 ikigiIG-~G~~~~~~~~~~~------~~~-~-~~~l~~v~~~~--~~~~~-------~~~-~~--------------~~   52 (358)
T 3gdo_A            6 IKVGILG-YGLSGSVFHGPLL------DVL-D-EYQISKIMTSR--TEEVK-------RDF-PD--------------AE   52 (358)
T ss_dssp             EEEEEEC-CSHHHHHTTHHHH------TTC-T-TEEEEEEECSC--HHHHH-------HHC-TT--------------SE
T ss_pred             CEEEEEE-CCHHHHHHHHHHH------HCC-C-CCEEEEEECCC--HHHHH-------HHC-CC--------------CC
T ss_conf             6799990-9699999999998------238-9-90899994889--99999-------867-99--------------83


Q ss_pred             EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf             78646789778998888740576784699840695686667777777258764435776056678988999999999873
Q gi|254780504|r   91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI  170 (492)
Q Consensus        91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~  170 (492)
                      .          |..+.++++..+  .=+.+.++||..=..++...-++|     .=|.+|||++.+++.|++|.+...+.
T Consensus        53 ~----------~~s~~ell~~~~--~DaV~i~tp~~~H~~~~~~al~~g-----k~V~~EKPla~~~~ea~~l~~~a~~~  115 (358)
T 3gdo_A           53 V----------VHELEEITNDPA--IELVIVTTPSGLHYEHTMACIQAG-----KHVVMEKPMTATAEEGETLKRAADEK  115 (358)
T ss_dssp             E----------ESSTHHHHTCTT--CCEEEECSCTTTHHHHHHHHHHTT-----CEEEEESSCCSSHHHHHHHHHHHHHH
T ss_pred             E----------ECCHHHHHCCCC--CCEEEECCCHHHHHHHHHHHHHCC-----CEEEEECEEHHHHHHHHHHHHHHHHC
T ss_conf             5----------399999965999--999998897688999999998659-----98986120001036789999987624


Q ss_pred             CCHHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCC-CHHHHHHH--HHHHHHHHHHHHHHHH
Q ss_conf             89688351242-01256877778877477520025280333079999984677-02455553--2200178876558999
Q gi|254780504|r  171 FKESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIG-VEDRVDYY--NNTGALRDMIQNHLLQ  246 (492)
Q Consensus       171 f~E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~g-vegR~~yy--D~~GaiRDmvQNHllQ  246 (492)
                      =   -.+.+-| +.--+.+|-+--+--.+.+-+       |.++.+....... ......+.  ...|++.|+.- |.+.
T Consensus       116 ~---~~~~v~~~~r~~p~~~~~k~~i~~G~lG~-------i~~~~~~~~~~~~~~~~~~~~~~~~~gG~l~~~g~-H~~d  184 (358)
T 3gdo_A          116 G---VLLSVYHNRRWDNDFLTIKKLISEGSLED-------INTYQVSYNRYRPEVQARWREKEGTATGTLYDLGS-HIID  184 (358)
T ss_dssp             T---CCEEEECGGGGSHHHHHHHHHHHTTSSCS-------CCEEEEECCCBCCCC----------CCSHHHHTHH-HHHH
T ss_pred             C---EEEEEEECCCCCCCCCCHHHHHCCCCCCC-------CCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCH-HHHH
T ss_conf             5---15654100013664320233430477676-------32000012235774322223444468863530536-7999


Q ss_pred             HHHHH
Q ss_conf             99998
Q gi|254780504|r  247 LLCLV  251 (492)
Q Consensus       247 lL~lv  251 (492)
                      ++..+
T Consensus       185 ~~~~l  189 (358)
T 3gdo_A          185 QTLHL  189 (358)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99997