HHsearch results for GI: 254780504 and protein with PDBid: 3o9z_A
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.72 E-value=0.056 Score=32.61 Aligned_cols=183 Identities=13% Similarity=0.062 Sum_probs=94.9
Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE
Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578
Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492)
Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492)
+-|.|++|--+++- ++||-+ ++ ...+..+.+.+... . .+... ..
T Consensus 6 ~~iIG~~G~i~~~h-~~al~~------~~--~~~v~~~d~~~~~~--~----~~~~~-----------------~~---- 49 (312)
T 3o9z_A 6 FALTGLAGYIAPRH-LKAIKE------VG--GVLVASLDPATNVG--L----VDSFF-----------------PE---- 49 (312)
T ss_dssp EEEECTTSSSHHHH-HHHHHH------TT--CEEEEEECSSCCCG--G----GGGTC-----------------TT----
T ss_pred EEEECCCCHHHHHH-HHHHHH------CC--CCEEEEECCHHHHH--H----HHHCH-----------------HH----
T ss_conf 99998898999999-999970------89--95899986703566--7----55158-----------------88----
Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389
Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492)
Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492)
.-.+.....|....+.+.......=+++.|+||..=..++...-++|. -|.+|||++.+++.|++|-+...+.=.
T Consensus 50 a~~~~~~~~~~~~~~~~~~~~~~iD~V~I~tp~~~H~~~~~~al~~gk-----~Vl~EKP~a~~~~e~~~l~~~~~~~~~ 124 (312)
T 3o9z_A 50 AEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-----NALSEKPLVLWPEEIARLKELEARTGR 124 (312)
T ss_dssp CEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-----EEEECSSSCSCHHHHHHHHHHHHHHCC
T ss_pred HHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCC-----CEEEECCCCCCHHHHHHHHHHHHHCCC
T ss_conf 987144235141889875027996599998995789999999997199-----489804875877787789999886398
Q ss_pred HHHEEECCCHHHHHHHHHHHHHHHCCC---CCHHHHCCCCEEEEEEEEEECCCCH-HHHHHHH---HHHHHHHHHHHHHH
Q ss_conf 688351242012568777788774775---2002528033307999998467702-4555532---20017887655899
Q gi|254780504|r 173 ESQIFRIDHYLGKEAVQGLMVFRFANT---FYESLWNNKYIDHVQITTAETIGVE-DRVDYYN---NTGALRDMIQNHLL 245 (492)
Q Consensus 173 E~qiyRIDHYLGKe~vqnil~lRFaN~---~~e~~WNr~~I~~VqIt~~E~~gve-gR~~yyD---~~GaiRDmvQNHll 245 (492)
.+- --+..||... +-+-+.+.....-+.++......-- ++.-++| .-|++-|+. -|.+
T Consensus 125 ---~~~-----------v~~~~R~~p~~~~~k~~i~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~~-~H~i 189 (312)
T 3o9z_A 125 ---RVY-----------TVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIG-IHFF 189 (312)
T ss_dssp ---CEE-----------ECCGGGGCHHHHHHHHHHHTCCSCEEEEEEEEECCCTTGGGSGGGCHHHHCCHHHHTT-HHHH
T ss_pred ---CEE-----------EEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEHHHH-HHHH
T ss_conf ---236-----------3001006999999999997088760599876404676542000257113787222147-8999
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780504|r 246 QLLCLV 251 (492)
Q Consensus 246 QlL~lv 251 (492)
-++..+
T Consensus 190 d~~~~l 195 (312)
T 3o9z_A 190 DLLAWL 195 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999998