Query gi|254780504|ref|YP_003064917.1| glucose-6-phosphate 1-dehydrogenase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 492 No_of_seqs 158 out of 1448 Neff 6.0 Searched_HMMs 23785 Date Tue May 31 20:31:12 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780504.hhm -d /home/congqian_1/database/pdb/pdb70.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 2bh9_A G6PD, glucose-6-phospha 100.0 0 0 1310.6 51.5 471 8-491 3-480 (489) 2 1dpg_A G6PD, glucose 6-phospha 100.0 0 0 1311.8 50.0 472 10-491 5-484 (485) 3 3btv_A Galactose/lactose metab 98.0 0.00062 2.6E-08 46.6 15.7 205 5-260 15-233 (438) 4 2nvw_A Galactose/lactose metab 97.4 0.0032 1.3E-07 41.5 11.8 205 6-259 35-252 (479) 5 2o4u_X Dimeric dihydrodiol deh 97.4 0.0095 4E-07 38.1 17.0 188 13-257 5-195 (334) 6 3cea_A MYO-inositol 2-dehydrog 97.4 0.01 4.2E-07 38.0 17.5 185 10-251 8-197 (346) 7 2p2s_A Putative oxidoreductase 97.4 0.00089 3.7E-08 45.5 8.3 59 105-170 58-116 (336) 8 1zh8_A Oxidoreductase; TM0312, 97.3 0.0037 1.6E-07 41.0 10.6 116 8-169 16-131 (340) 9 3e18_A Oxidoreductase; dehydro 97.2 0.015 6.1E-07 36.8 29.7 333 8-461 3-346 (359) 10 3e82_A Putative oxidoreductase 97.2 0.0067 2.8E-07 39.2 11.3 110 11-170 8-117 (364) 11 3c1a_A Putative oxidoreductase 97.2 0.0038 1.6E-07 41.0 9.7 183 7-258 7-190 (315) 12 3mz0_A Inositol 2-dehydrogenas 97.1 0.02 8.4E-07 35.8 18.2 187 13-259 5-192 (344) 13 1xea_A Oxidoreductase, GFO/IDH 97.1 0.0082 3.4E-07 38.6 10.8 118 12-181 4-121 (323) 14 3db2_A Putative NADPH-dependen 97.1 0.0083 3.5E-07 38.6 10.6 189 9-258 4-199 (354) 15 1tlt_A Putative oxidoreductase 97.1 0.0073 3.1E-07 38.9 10.3 175 11-254 6-180 (319) 16 3moi_A Probable dehydrogenase; 97.0 0.027 1.1E-06 34.9 15.7 189 13-260 5-198 (387) 17 3f4l_A Putative oxidoreductase 96.9 0.028 1.2E-06 34.7 12.6 182 13-252 5-187 (345) 18 3i23_A Oxidoreductase, GFO/IDH 96.9 0.012 5E-07 37.4 10.0 111 13-170 5-115 (349) 19 3e9m_A Oxidoreductase, GFO/IDH 96.7 0.039 1.7E-06 33.7 17.0 190 10-260 5-199 (330) 20 3evn_A Oxidoreductase, GFO/IDH 96.6 0.0065 2.7E-07 39.3 7.3 111 12-170 7-117 (329) 21 1ydw_A AX110P-like protein; st 96.6 0.013 5.3E-07 37.2 8.7 192 9-260 5-209 (362) 22 2ho3_A Oxidoreductase, GFO/IDH 96.6 0.04 1.7E-06 33.7 10.9 178 13-252 4-190 (325) 23 3kux_A Putative oxidoreductase 96.4 0.037 1.5E-06 33.9 9.9 181 12-252 9-192 (352) 24 3gdo_A Uncharacterized oxidore 96.4 0.051 2.2E-06 32.9 10.4 180 11-251 6-189 (358) 25 3dty_A Oxidoreductase, GFO/IDH 96.3 0.016 6.7E-07 36.5 7.4 85 77-170 49-135 (398) 26 3ec7_A Putative dehydrogenase; 96.0 0.1 4.2E-06 30.8 14.5 122 117-257 89-211 (357) 27 3o9z_A Lipopolysaccaride biosy 95.7 0.056 2.3E-06 32.6 8.2 183 13-251 6-195 (312) 28 1h6d_A Precursor form of gluco 95.7 0.13 5.5E-06 30.0 33.3 275 105-469 142-427 (433) 29 3euw_A MYO-inositol dehydrogen 95.6 0.14 6E-06 29.7 17.9 181 12-254 6-188 (344) 30 3m2t_A Probable dehydrogenase; 95.2 0.18 7.7E-06 28.9 26.8 319 11-456 6-329 (359) 31 3ip3_A Oxidoreductase, putativ 95.2 0.037 1.6E-06 33.9 5.8 125 118-258 70-199 (337) 32 2glx_A 1,5-anhydro-D-fructose 94.4 0.29 1.2E-05 27.5 33.5 314 13-461 3-324 (332) 33 2ixa_A Alpha-N-acetylgalactosa 94.1 0.15 6.2E-06 29.6 6.7 68 117-192 93-161 (444) 34 3oqb_A Oxidoreductase; structu 93.9 0.073 3.1E-06 31.8 4.9 119 117-251 85-213 (383) 35 3ezy_A Dehydrogenase; structur 93.9 0.37 1.5E-05 26.7 20.4 184 12-255 4-188 (344) 36 3oa2_A WBPB; oxidoreductase, s 92.5 0.57 2.4E-05 25.3 14.4 124 117-256 75-203 (318) 37 1lc0_A Biliverdin reductase A; 91.7 0.55 2.3E-05 25.5 6.8 49 117-170 67-115 (294) 38 1hdo_A Biliverdin IX beta redu 91.1 0.53 2.2E-05 25.6 6.2 61 11-105 4-64 (206) 39 3fhl_A Putative oxidoreductase 88.2 1.3 5.5E-05 22.7 24.0 184 13-258 8-196 (362) 40 3dhn_A NAD-dependent epimerase 71.2 4.8 0.0002 18.7 5.3 59 12-105 6-64 (227) 41 2z1m_A GDP-D-mannose dehydrata 63.9 6.6 0.00028 17.7 5.8 82 12-125 5-86 (345) 42 1esw_A Amylomaltase; (beta,alp 56.8 2 8.4E-05 21.4 0.2 24 162-185 275-298 (500) 43 1tz7_A 4-alpha-glucanotransfer 56.4 2.8 0.00012 20.4 0.9 26 157-185 286-311 (505) 44 2jl1_A Triphenylmethane reduct 55.3 9.2 0.00038 16.7 7.1 63 11-105 1-63 (287) 45 2bka_A CC3, TAT-interacting pr 54.6 9.4 0.0004 16.6 4.4 40 9-56 17-56 (242) 46 1x1n_A 4-alpha-glucanotransfer 54.0 2.4 1E-04 20.9 0.2 23 163-185 304-326 (524) 47 3kgf_A Probable 3-deoxy-D-arab 51.7 8.2 0.00034 17.1 2.6 27 269-297 319-345 (464) 48 3e48_A Putative nucleoside-dip 46.5 12 0.00052 15.8 5.6 75 12-125 2-76 (289) 49 3ew7_A LMO0794 protein; Q8Y8U8 44.5 13 0.00056 15.6 4.1 32 13-54 3-34 (221) 50 1xq6_A Unknown protein; struct 43.7 14 0.00057 15.5 7.2 75 11-124 5-79 (253) 51 2x4g_A Nucleoside-diphosphate- 42.2 14 0.0006 15.3 7.4 73 10-122 13-85 (342) 52 2r6j_A Eugenol synthase 1; phe 40.5 15 0.00064 15.1 9.6 79 12-126 13-91 (318) 53 2fr1_A Erythromycin synthase, 39.1 16 0.00067 15.0 7.3 30 152-181 175-205 (486) 54 1ff9_A Saccharopine reductase; 39.1 16 0.00067 15.0 8.5 153 9-216 2-154 (450) 55 2zcu_A Uncharacterized oxidore 37.5 17 0.0007 14.8 12.1 74 13-124 2-75 (286) 56 3mje_A AMPHB; rossmann fold, o 37.4 17 0.00071 14.8 7.8 31 148-178 182-213 (496) 57 2x4h_A Hypothetical protein SS 37.4 17 0.00071 14.8 2.6 73 120-193 40-123 (139) 58 2wm3_A NMRA-like family domain 36.4 17 0.00073 14.7 10.0 65 10-105 5-69 (299) 59 3dqp_A Oxidoreductase YLBE; al 35.4 18 0.00076 14.6 4.8 33 12-54 2-34 (219) 60 1ytm_A Phosphoenolpyruvate car 35.1 18 0.00077 14.6 2.6 71 115-187 15-122 (532) 61 2p5y_A UDP-glucose 4-epimerase 33.9 19 0.0008 14.4 5.4 59 13-105 3-61 (311) 62 3oh8_A Nucleoside-diphosphate 33.1 20 0.00082 14.3 5.1 40 7-56 144-183 (516) 63 1qyd_A Pinoresinol-lariciresin 32.3 20 0.00085 14.2 7.7 67 13-105 7-73 (313) 64 2pd6_A Estradiol 17-beta-dehyd 30.4 22 0.00091 14.0 4.6 85 1-109 1-85 (264) 65 1i5g_A Tryparedoxin II; electr 29.9 22 0.00092 14.0 10.4 78 11-112 30-107 (144) 66 1r6b_X CLPA protein; AAA+, N-t 28.6 16 0.00068 14.9 1.1 48 120-172 319-366 (758) 67 1vl0_A DTDP-4-dehydrorhamnose 27.5 24 0.001 13.7 3.6 40 8-57 10-49 (292) 68 1kjw_A Postsynaptic density pr 27.2 24 0.001 13.7 2.0 19 12-30 107-125 (295) 69 2bgk_A Rhizome secoisolaricire 27.1 24 0.001 13.6 6.9 73 8-109 14-86 (278) 70 1xgk_A Nitrogen metabolite rep 25.9 26 0.0011 13.5 7.3 78 11-124 6-83 (352) 71 1q0q_A 1-deoxy-D-xylulose 5-ph 25.8 26 0.0011 13.5 6.6 47 12-67 11-57 (406) 72 1h5q_A NADP-dependent mannitol 25.3 26 0.0011 13.4 7.1 77 7-110 11-87 (265) 73 1sny_A Sniffer CG10964-PA; alp 25.2 26 0.0011 13.4 5.6 73 11-109 22-94 (267) 74 3kvo_A Hydroxysteroid dehydrog 24.3 27 0.0011 13.3 4.2 81 8-109 43-123 (346) 75 3c1o_A Eugenol synthase; pheny 22.5 29 0.0012 13.1 10.3 68 12-105 6-74 (321) 76 1nnx_A Protein YGIW; structura 21.8 24 0.001 13.7 1.0 16 321-336 63-78 (109) 77 3afn_B A1-R, 4-deoxy-L-erythro 21.4 31 0.0013 12.9 3.7 76 6-109 3-79 (258) 78 1vkr_A Mannitol-specific PTS s 20.9 30 0.0013 13.0 1.3 34 159-192 65-98 (125) 79 2ysr_A DEP domain-containing p 20.7 21 0.0009 14.1 0.5 38 175-213 35-85 (105) 80 3e8x_A Putative NAD-dependent 20.6 32 0.0014 12.8 5.2 38 8-55 19-56 (236) 81 2v6g_A Progesterone 5-beta-red 20.2 33 0.0014 12.7 4.7 63 13-105 4-66 (364) 82 3i6i_A Putative leucoanthocyan 20.2 33 0.0014 12.7 12.0 67 12-105 12-78 (346) No 1 >2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A* Probab=100.00 E-value=0 Score=1310.64 Aligned_cols=471 Identities=32% Similarity=0.594 Sum_probs=446.2 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH Q ss_conf 98987899864435667657799999997289875781799998886998899999999998742346799899998985 Q gi|254780504|r 8 IHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLS 87 (492) Q Consensus 8 ~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~ 87 (492) .+|++|||||||||||+||||||||+|+++|++|+ +++|||+||+++++++|++.+++.++. ...++..|++|++ T Consensus 3 ~d~~i~VIFGaTGDLA~RKL~PAL~~L~~~g~Lp~-~~~IiG~aR~~~~~e~fr~~~~~~~~~----~~~~~~~~~~F~~ 77 (489) T 2bh9_A 3 SDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPE-NTFIVGYARSRLTVADIRKQSEPFFKA----TPEEKLKLEDFFA 77 (489) T ss_dssp CCCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCS-SEEEEEEESSCCCHHHHHHHHGGGSCC----CGGGHHHHHHHHH T ss_pred CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCC-CCEEEEEECCCCCHHHHHHHHHHHHHC----CCCCHHHHHHHHH T ss_conf 89957999734118876079999999998099999-978999989979989999999998502----8644899999981 Q ss_pred HCCEEECCCCCHHHHHHHHHHHCC---CCCCCEEEEECCCHHHHHHHHHHHHHHCCC-CCCCEEEEECCCCCCHHHHHHH Q ss_conf 165786467897789988887405---767846998406956866677777772587-6443577605667898899999 Q gi|254780504|r 88 LIFYINLDVEKNYGWELLGKLLDI---DKTRIRVFYLAMSSAFFGKISQRIHANNLV-TEHTRVVLEKPIGSNLSSAQEI 163 (492) Q Consensus 88 ~~~Y~~~d~~~~~~y~~L~~~l~~---~~~~~rifYLAiPP~~f~~i~~~L~~~~l~-~~~~RiViEKPFG~Dl~SA~eL 163 (492) +++|+++|++++++|..|++.++. ....+|||||||||++|+.||++|+++||+ .+|+|||||||||+||+||++| T Consensus 78 ~~~Y~~~d~~~~~~y~~L~~~l~~~~~~~~~~rifYLAvPP~~f~~i~~~L~~~~l~~~~~~RvVvEKPFG~Dl~SA~~l 157 (489) T 2bh9_A 78 RNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRL 157 (489) T ss_dssp TEEEEECCSSCHHHHHHHHHHHHTTTTTTTSEEEEEECSCTTSHHHHHHHHHHHSCCSSSCEEEEECSCSCSSHHHHHHH T ss_pred HCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHH T ss_conf 18898168898789999999999874288875389994598999999999998467756771488845877866889999 Q ss_pred HHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 99998738968835124201256877778877477520025280333079999984677024555532200178876558 Q gi|254780504|r 164 HAITRKIFKESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNH 243 (492) Q Consensus 164 n~~l~~~f~E~qiyRIDHYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNH 243 (492) |+.|+++|+|+||||||||||||||||||+|||+|++|||+|||+||++||||++|++|||||++|||++|||||||||| T Consensus 158 n~~l~~~f~E~qIyRIDHYLGKe~Vqnil~lRfaN~~~e~lWN~~~I~~VqI~~~E~~gvegR~~yYD~~GaiRDmvQNH 237 (489) T 2bh9_A 158 SNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNH 237 (489) T ss_dssp HHHHTTTSCGGGEEECCGGGGCHHHHHHHHHHHSCGGGSTTCSTTTEEEEEEEEECSCCCTTCHHHHTTTHHHHHTTTTH T ss_pred HHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHH T ss_conf 99999756913320002566599999999999716424334340355368999617887664221322013578877728 Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCC-CCEECCCCCCCCCCCC-CCCCCEEE Q ss_conf 999999987185445885899999999997306888112236136521366776-8734334101479886-64874389 Q gi|254780504|r 244 LLQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGII-NGIPVKGYLEEIPLGI-SDTETFVA 321 (492) Q Consensus 244 llQlL~lvAMe~P~~~~~~~ir~eK~kvlk~~r~~~~~~v~~~~v~GQY~~~~~-~~~~v~gY~~e~~v~~-S~TeTfaa 321 (492) |||||||||||||.++++++||+||+|||||+||++++++ |+|||.++.. .|+.++||++|+||++ |+|||||| T Consensus 238 LlQlL~lvaME~P~~~~~~~ir~eK~kvL~al~~i~~~~v----v~gqy~~~~~~~~~~~~gY~~e~gV~~~S~TeTfaa 313 (489) T 2bh9_A 238 LLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNV----VLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAA 313 (489) T ss_dssp HHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCGGGE----EEEEEECCTTSCSTTSSCGGGCTTSCTTCCCCSEEE T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC----CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEE T ss_conf 9999999985688999989999999999971676875443----135274254125740366234679877788630036 Q ss_pred EEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEE Q ss_conf 99997085867857775513346885179999985488643766654789856999971796504443312688877445 Q gi|254780504|r 322 IKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTIFDHQMSKIETNKLILRLQNNGEIEQFITTKDHSTSNMKL 401 (492) Q Consensus 322 ~~l~idn~RW~gVPF~lrtGK~l~~k~~eI~i~FK~~p~~~f~~~~~~~~~N~Lvi~iqP~~~i~l~~~~K~pg~~~~~~ 401 (492) ++++||||||+||||||||||+|++|+|||+|+||++|+.+|... +.+|+|||+|||+++|.+++++|.||. .+.+ T Consensus 314 ~~l~Idn~RW~GVPF~lrtGK~L~~~~teI~i~Fk~~~~~~f~~~---~~~n~lv~~iqP~e~i~l~~~~k~pg~-~~~~ 389 (489) T 2bh9_A 314 VVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQ---CKRNELVIRVQPNEAVYTKMMTKKPGM-FFNP 389 (489) T ss_dssp EEEEBCSTTTTTCEEEEEEESSCSSCEEEEEEEECCCSSCCSTTC---CCCCEEEEEEESSCEEEEEEEEECTTT-CCSE T ss_pred EEEEECCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCC---CCCCEEEEEECCCCCCCEEEECCCCCC-CCCE T ss_conf 789862773079758997367756554799999757885301357---788869998469753412110238988-8732 Q ss_pred EEEEEEEEECCCCC-CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH Q ss_conf 46666553022345-68986248999999879833586989999845884699998873489874579889971889999 Q gi|254780504|r 402 KTTALRICCCSKRI-KRTPDGYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAAGTWGPDQSDVL 480 (492) Q Consensus 402 ~~~~l~~~~~~~~~-~~~pdaYe~Ll~D~i~Gd~tlF~r~dEve~sWrivdpiL~~~~~~~~~~~~Y~~GS~GP~~a~~l 480 (492) .++.|++++.+.+. ...|||||+||+|||+||||+|+|+||||+||+||||||+.|+.++++|.+|++|||||++|++| T Consensus 390 ~~~~l~~~~~~~~~~~~~~daYe~Ll~d~~~Gd~tlF~~~deve~sW~i~dpil~~~~~~~~~~~~Y~~Gs~GP~~a~~l 469 (489) T 2bh9_A 390 EESELDLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADEL 469 (489) T ss_dssp EEEEEEEETTTSSSSSCCCCHHHHHHHHHHHTCCTTSCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEETTSSSCHHHHHH T ss_pred EEEEECCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH T ss_conf 56650361420258998887199999999779965689989999999999999999975799887889999799999999 Q ss_pred HHHCCCCCCCC Q ss_conf 99818844778 Q gi|254780504|r 481 LQKDGRRWHNN 491 (492) Q Consensus 481 ~~~~g~~W~~~ 491 (492) ++|+|++|+++ T Consensus 470 l~~~g~~w~~~ 480 (489) T 2bh9_A 470 MKRVGFQYEGT 480 (489) T ss_dssp HHHHTCCCCSC T ss_pred HHHHCCCCCCC T ss_conf 99509896899 No 2 >1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A* Probab=100.00 E-value=0 Score=1311.84 Aligned_cols=472 Identities=33% Similarity=0.614 Sum_probs=449.1 Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC Q ss_conf 98789986443566765779999999728987578179999888699889999999999874234679989999898516 Q gi|254780504|r 10 NSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLI 89 (492) Q Consensus 10 ~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~ 89 (492) ++.+||||||||||+||||||||+||++|+||+ +++|||+||+++++++|++.++++++++.. +++.+++|++++ T Consensus 5 ~tiiVIFGATGDLA~RKL~PALf~L~~~g~Lp~-~~~IiG~aR~~~~~e~fr~~i~~~l~~~~~----d~~~~~~F~~~~ 79 (485) T 1dpg_A 5 KTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQK-HFAIVGTARQALNDDEFKQLVRDCIKDFTD----DQAQAEAFIEHF 79 (485) T ss_dssp CEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCS-SEEEEEEESSCCCHHHHHHHHHHHHGGGCS----CHHHHHHHHTTE T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCC-CCEEEEEECCCCCHHHHHHHHHHHHHHHCC----CHHHHHHHHHHC T ss_conf 849999765328765069999999997499999-968999979989989999999999887489----888999999728 Q ss_pred CEEECCCCCHHHHHHHHHHHCC-----CCCCCEEEEECCCHHHHHHHHHHHHHHCCC--CCCCEEEEECCCCCCHHHHHH Q ss_conf 5786467897789988887405-----767846998406956866677777772587--644357760566789889999 Q gi|254780504|r 90 FYINLDVEKNYGWELLGKLLDI-----DKTRIRVFYLAMSSAFFGKISQRIHANNLV--TEHTRVVLEKPIGSNLSSAQE 162 (492) Q Consensus 90 ~Y~~~d~~~~~~y~~L~~~l~~-----~~~~~rifYLAiPP~~f~~i~~~L~~~~l~--~~~~RiViEKPFG~Dl~SA~e 162 (492) +|+++|++++++|..|++.++. +...+||||||+||++|+.||++|+++|+. ++|+|||||||||+||+||++ T Consensus 80 ~Y~~~d~~~~~~y~~L~~~l~~~~~~~~~~~~rifYLAvPP~~f~~i~~~l~~~~l~~~~~~~RvviEKPfG~dl~Sa~~ 159 (485) T 1dpg_A 80 SYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAPRFFGTIAKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAE 159 (485) T ss_dssp EEEECCTTCTTHHHHHHHHHHHHHHHTTCCSCEEEEECSCGGGHHHHHHHHHHTTCSCSSSCEEEEECSCCCSSHHHHHH T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHH T ss_conf 68833699878999999999988751078875589982497998999999987247788875357862477577316899 Q ss_pred HHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 99999873896883512420125687777887747752002528033307999998467702455553220017887655 Q gi|254780504|r 163 IHAITRKIFKESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQN 242 (492) Q Consensus 163 Ln~~l~~~f~E~qiyRIDHYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQN 242 (492) ||+.|+++|+|+||||||||||||||||||+|||+|++|||+|||+||+|||||++|++|||||++|||++||||||||| T Consensus 160 Ln~~l~~~f~E~qIyRIDHYLGKe~VqNll~lRFaN~~feplWN~~~I~~VqIt~~E~~gvegR~~yYD~~GaiRDmvQN 239 (485) T 1dpg_A 160 LQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQN 239 (485) T ss_dssp HHHHHTTTCCGGGEEECCGGGGSGGGGGHHHHHHTCHHHHTTSSTTTEEEEEEEEECSCCCTTCHHHHHHHHHHHHTTTT T ss_pred HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHH T ss_conf 99999976297760351122228999999999862531322551157668999994777742666676401359999999 Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCC-CCCCCEEE Q ss_conf 89999999871854458858999999999973068881122361365213667768734334101479886-64874389 Q gi|254780504|r 243 HLLQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLEEIPLGI-SDTETFVA 321 (492) Q Consensus 243 HllQlL~lvAMe~P~~~~~~~ir~eK~kvlk~~r~~~~~~v~~~~v~GQY~~~~~~~~~v~gY~~e~~v~~-S~TeTfaa 321 (492) ||||||||||||||.++++++||+||+||||++||++++++.+++|||||++| ++..++||++|+||++ |+|||||| T Consensus 240 HLlQlL~lvAME~P~~~~~~~ir~eK~kvL~slr~~~~~~v~~~~v~GQY~~~--~~~~~~gY~~e~gV~~~S~TeTfaa 317 (485) T 1dpg_A 240 HTMQIVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAG--DSADFKPYLEELDVPADSKNNTFIA 317 (485) T ss_dssp HHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCHHHHHHHEEEEEECCC--SSTTCCCGGGSTTCCTTCCCCSEEE T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCCC--CCCCCCCEECCCCCCCCCCCCHHEE T ss_conf 99999999982886779989999999999987356774555332213565568--8887677003689888888730258 Q ss_pred EEEEECCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEE Q ss_conf 99997085867857775513346885179999985488643766654789856999971796504443312688877445 Q gi|254780504|r 322 IKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTIFDHQMSKIETNKLILRLQNNGEIEQFITTKDHSTSNMKL 401 (492) Q Consensus 322 ~~l~idn~RW~gVPF~lrtGK~l~~k~~eI~i~FK~~p~~~f~~~~~~~~~N~Lvi~iqP~~~i~l~~~~K~pg~~~~~~ 401 (492) ++++||||||+||||||||||+|++|+|||+|+||++|+.+|... ...+|+|+|+|||+++|.+++++|.||. .+.+ T Consensus 318 ~~l~Idn~RW~GVPF~lrtGK~l~~~~teI~i~fk~~~~~~~~~~--~~~~n~l~~~i~P~e~i~l~~~~k~pg~-~~~~ 394 (485) T 1dpg_A 318 GELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFNFGSEQ--EAQEAVLSIIIDPKGAIELKLNAKSVED-AFNT 394 (485) T ss_dssp EEECBCSGGGTTCCEEEEEESSBSSCEEEEEEEECCCCCCCCSSS--CCCCCEEEEEEESSCEEEEEEEEECSSS-SCCE T ss_pred EEEEECCCCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCC--CCCCCEEEEEECCCCCCEEEEECCCCCC-CCEE T ss_conf 899974872379867998455657782179999737986567533--4677626998579813058984578887-7514 Q ss_pred EEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH Q ss_conf 46666553022345689862489999998798335869899998458846999988734898745798899718899999 Q gi|254780504|r 402 KTTALRICCCSKRIKRTPDGYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAAGTWGPDQSDVLL 481 (492) Q Consensus 402 ~~~~l~~~~~~~~~~~~pdaYe~Ll~D~i~Gd~tlF~r~dEve~sWrivdpiL~~~~~~~~~~~~Y~~GS~GP~~a~~l~ 481 (492) .++.|++++........|+|||+||+|||+|||++|+|+||||+||+||||||++|+.++.+|.+|++|||||++|++|+ T Consensus 395 ~~~~l~~~~~~~~~~~~~~aYe~Ll~d~~~Gd~~~F~r~dEve~sW~iv~pil~~~~~~~~~~~~Y~~Gs~GP~~a~~l~ 474 (485) T 1dpg_A 395 RTIDLGWTVSDEDKKNTPEPYERMIHDTMNGDGSNFADWNGVSIAWKFVDAISAVYTADKAPLETYKSGSMGPEASDKLL 474 (485) T ss_dssp EEEEEEEECCHHHHHHCCCHHHHHHHHHHHTCCTTSBCHHHHHHHHHHHHHHHHHHHTTCSCCEEECTTBSSCHHHHHHH T ss_pred EEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH T ss_conf 66146775434478868871899999997799766899799999998787999999867999887899997989999999 Q ss_pred HHCCCCCCCC Q ss_conf 9818844778 Q gi|254780504|r 482 QKDGRRWHNN 491 (492) Q Consensus 482 ~~~g~~W~~~ 491 (492) +++|+.|++. T Consensus 475 ~~~g~~W~~~ 484 (485) T 1dpg_A 475 AANGDAWVFK 484 (485) T ss_dssp HTTTCCCSCC T ss_pred HHCCCCCCCC T ss_conf 7259971579 No 3 >3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3btu_A Probab=98.03 E-value=0.00062 Score=46.63 Aligned_cols=205 Identities=11% Similarity=0.080 Sum_probs=114.5 Q ss_pred CCCCCCCCEEEECCC--CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH Q ss_conf 898989878998644--356676577999999972898757817999988869988999999999987423467998999 Q gi|254780504|r 5 TPNIHNSDFIIFGGT--GDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKV 82 (492) Q Consensus 5 tp~~~~~~lVIFGAT--GDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~ 82 (492) .|+..|--+-|.|+. |-=+.+.-+|||.++ ++ .+.|++++-. +.+.-+ T Consensus 15 ~~~~~pirvgiiG~G~~~~~~~~~h~~al~~~------~~-~~~lvav~d~--~~e~a~--------------------- 64 (438) T 3btv_A 15 VPNAAPIRVGFVGLNAAKGWAIKTHYPAILQL------SS-QFQITALYSP--KIETSI--------------------- 64 (438) T ss_dssp ----CCEEEEEESCCTTSSSTTTTHHHHHHHT------TT-TEEEEEEECS--SHHHHH--------------------- T ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHC------CC-CEEEEEEECC--CHHHHH--------------------- T ss_conf 99999718999924875328999999999856------99-8599999859--999999--------------------- Q ss_pred HHHHHHCCEEEC-CCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCC-CCCEEEEECCCCCCHHHH Q ss_conf 989851657864-678977899888874057678469984069568666777777725876-443577605667898899 Q gi|254780504|r 83 QKFLSLIFYINL-DVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVT-EHTRVVLEKPIGSNLSSA 160 (492) Q Consensus 83 ~~F~~~~~Y~~~-d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~-~~~RiViEKPFG~Dl~SA 160 (492) ++.+...+-.. -|+ +|+.| ++..+ .=+.|.++||..-..++...-++|++. ...-|++|||++.+++.| T Consensus 65 -~~a~~~~~~~~~~y~---~~~~l---l~~~~--vD~V~I~tp~~~H~~~~~~al~aG~~~~~~KhV~~EKPla~~~~ea 135 (438) T 3btv_A 65 -ATIQRLKLSNATAFP---TLESF---ASSST--IDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQA 135 (438) T ss_dssp -HHHHHTTCTTCEEES---SHHHH---HHCSS--CSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHH T ss_pred -HHHHHHCCCCCCCCC---CHHHH---HCCCC--CCEEEECCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHH T ss_conf -999983999872069---99999---55999--9889991987999999999998352015674599917713557788 Q ss_pred HHHHHHHHHHCCHHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCC------CHHHHHHHH-- Q ss_conf 999999987389688351242-01256877778877477520025280333079999984677------024555532-- Q gi|254780504|r 161 QEIHAITRKIFKESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIG------VEDRVDYYN-- 231 (492) Q Consensus 161 ~eLn~~l~~~f~E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~g------vegR~~yyD-- 231 (492) ++|-+...+. ..++.+.| |.--+.++-+--+--.+.|=+ |-+|++......- -..+ -++| T Consensus 136 ~~l~~~a~~~---~~~~~v~~~~r~~p~~~~~k~li~~G~iG~-------i~~~~~~~~~~~~~~~~~~~~~~-w~~~~~ 204 (438) T 3btv_A 136 ESIYKAAAER---GVQTIISLQGRKSPYILRAKELISQGYIGD-------INSIEIAGNGGWYGYERPVKSPK-YIYEIG 204 (438) T ss_dssp HHHHHHHHTT---TCEEEEECGGGGCHHHHHHHHHHHTTTTCS-------EEEEEEEEECSSSSSEEETTSCG-GGGSTT T ss_pred HHHHHHHHHC---CCEEEEEEEECCCHHHHHHHHHHHCCCCCC-------EEEEEEEEECCCCCCCCCCCCCC-CCCCCC T ss_conf 8999987613---986777342025748999888986597387-------69999999557466656667733-121224 Q ss_pred -HHHHHHHHHHHHHHHHHHHHHCCCCCCCC Q ss_conf -20017887655899999998718544588 Q gi|254780504|r 232 -NTGALRDMIQNHLLQLLCLVAMEMPPSVE 260 (492) Q Consensus 232 -~~GaiRDmvQNHllQlL~lvAMe~P~~~~ 260 (492) .-|++-|+. .|++-++..+.=++|.+.. T Consensus 205 ~GGG~l~d~g-~H~lD~~~~l~G~~~~~V~ 233 (438) T 3btv_A 205 NGVDLVTTTF-GHTIDILQYMTSSYFSRIN 233 (438) T ss_dssp SSCSTTTTHH-HHHHHHHHHHHTCCEEEEE T ss_pred CCCCEEECHH-HHHHHHHHHHHCCCCEEEE T ss_conf 5886473067-8899999998399834999 No 4 >2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A Probab=97.44 E-value=0.0032 Score=41.52 Aligned_cols=205 Identities=10% Similarity=0.093 Sum_probs=106.7 Q ss_pred CCCCCCCEEEECCCC--HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH Q ss_conf 989898789986443--566765779999999728987578179999888699889999999999874234679989999 Q gi|254780504|r 6 PNIHNSDFIIFGGTG--DLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQ 83 (492) Q Consensus 6 p~~~~~~lVIFGATG--DLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~ 83 (492) |+..|--+-|.|+++ -.+.+.-+|||..+ +. .+.|++++-++ .+. .+ T Consensus 35 p~~~piRvGiIG~G~~~g~~~~~H~~al~~~------~~-~~elvAv~d~~--~e~----------------------a~ 83 (479) T 2nvw_A 35 PSSRPIRVGFVGLTSGKSWVAKTHFLAIQQL------SS-QFQIVALYNPT--LKS----------------------SL 83 (479) T ss_dssp GGGCCEEEEEECCCSTTSHHHHTHHHHHHHT------TT-TEEEEEEECSC--HHH----------------------HH T ss_pred CCCCCCEEEEECCCCCCCHHHHHHHHHHHHC------CC-CEEEEEEECCC--HHH----------------------HH T ss_conf 9999727999968987647999999999837------98-87999998899--999----------------------99 Q ss_pred HHHHHCCEEEC-CCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCC-CCEEEEECCCCCCHHHHH Q ss_conf 89851657864-6789778998888740576784699840695686667777777258764-435776056678988999 Q gi|254780504|r 84 KFLSLIFYINL-DVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTE-HTRVVLEKPIGSNLSSAQ 161 (492) Q Consensus 84 ~F~~~~~Y~~~-d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~-~~RiViEKPFG~Dl~SA~ 161 (492) ++.+++..-.. -|+ +|+.| ++..+ .=+.+.++||..=..++...-++|+... ..-|.+|||++.+++.|+ T Consensus 84 ~~a~~~g~~~~~~y~---d~~el---l~~~~--vD~V~I~tp~~~H~~~~~~Al~aG~~~~~~KhV~~EKPla~~~~ea~ 155 (479) T 2nvw_A 84 QTIEQLQLKHATGFD---SLESF---AQYKD--IDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAE 155 (479) T ss_dssp HHHHHTTCTTCEEES---CHHHH---HHCTT--CSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHH T ss_pred HHHHHHCCCCCCCCC---CHHHH---HCCCC--CCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHH T ss_conf 999985889774469---99999---55999--98899949827899999999982954356873899267531056679 Q ss_pred HHHHHHHHHCCHHHEEECCCHH-HHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCC-----CHHHHHHHH---H Q ss_conf 9999998738968835124201-256877778877477520025280333079999984677-----024555532---2 Q gi|254780504|r 162 EIHAITRKIFKESQIFRIDHYL-GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIG-----VEDRVDYYN---N 232 (492) Q Consensus 162 eLn~~l~~~f~E~qiyRIDHYL-GKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~g-----vegR~~yyD---~ 232 (492) +|-+...+.= .-.+-+.|-+ --+.++-+--+--.+.+=+ |-+|++......- .....-++| . T Consensus 156 ~l~~~a~~~~--~v~~~v~~~~R~~p~~~~~k~li~~G~iG~-------i~~v~~~~~~~~~~~~~~~~~~~w~~~~~~g 226 (479) T 2nvw_A 156 ELYSISQQRA--NLQTIICLQGRKSPYIVRAKELISEGCIGD-------INSIEISGNGGWYGYERPMRSPEYLYDIESG 226 (479) T ss_dssp HHHHHHHTCT--TCEEEEECGGGGCHHHHHHHHHHHTTTTCS-------EEEEEEEEECSBSSSEEETTCCGGGGCGGGS T ss_pred HHHHHHHHCC--CCEEEEEEEEECCCHHHHHHHHHHCCCCCC-------EEEEEEEECCCCCCCCCCCCCCCCCCCCCCC T ss_conf 9999976325--420330033212731789999997699898-------5999999625746655767780202362358 Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCC Q ss_conf 001788765589999999871854458 Q gi|254780504|r 233 TGALRDMIQNHLLQLLCLVAMEMPPSV 259 (492) Q Consensus 233 ~GaiRDmvQNHllQlL~lvAMe~P~~~ 259 (492) -|++-|+. .|.+.++..+.=++|.+. T Consensus 227 gg~l~d~g-~H~iD~~~~l~G~~~~~V 252 (479) T 2nvw_A 227 VNLISNSF-GHTIDVLQYITGSYFQKI 252 (479) T ss_dssp CSTTTTHH-HHHHHHHHHHHTCCEEEE T ss_pred CEEEECCH-HHHHHHHHHHHCCCCEEE T ss_conf 50440407-779999999829995399 No 5 >2o4u_X Dimeric dihydrodiol dehydrogenase; NADP-binding rossmann-fold domain, predominantly anti- parallel beta sheet, oxidoreductase; 2.00A {Macaca fascicularis} PDB: 2o48_X 2poq_X* Probab=97.42 E-value=0.0095 Score=38.13 Aligned_cols=188 Identities=15% Similarity=0.143 Sum_probs=96.5 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +=|.|+ |.-+++ ..++| ..++..++.|+|++-. +.+. .++|.+..... T Consensus 5 ~giIG~-G~~g~~-~~~~l------~~~~~~~~~l~~v~d~--~~~~----------------------~~~~a~~~~~~ 52 (334) T 2o4u_X 5 WGIVSV-GLISSD-FTAVL------QTLPRSEHQVVAVAAR--DLSR----------------------AKEFAQKHDIP 52 (334) T ss_dssp EEEECC-SHHHHH-HHHHH------TTSCTTTEEEEEEECS--SHHH----------------------HHHHHHHHTCS T ss_pred EEEECC-CHHHHH-HHHHH------HHCCCCCEEEEEEECC--CHHH----------------------HHHHHHHCCCC T ss_conf 999999-399999-99999------8585888599999879--9999----------------------99999983998 Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) . -++ +|+ ++++..+ .-+.|+++||+.=..++..+-++| .-|.+|||++.+++.+++|-+...+. T Consensus 53 ~-~~~---~~~---~ll~~~~--iD~v~I~tp~~~h~~~~~~al~~g-----khVl~EKP~~~~~~e~~~l~~~a~~~-- 116 (334) T 2o4u_X 53 K-AYG---SYE---ELAKDPN--VEVAYVGTQHPQHKAAVMLCLAAG-----KAVLCEKPMGVNAAEVREMVTEARSR-- 116 (334) T ss_dssp E-EES---SHH---HHHTCTT--CSEEEECCCGGGHHHHHHHHHHTT-----CEEEECSSSSSSHHHHHHHHHHHHHH-- T ss_pred C-EEC---CHH---HHHCCCC--CCEEEEECCCCCCHHHHHHHHHCC-----CEEEECCCCCCCCCCHHHHHHHHHHC-- T ss_conf 2-548---999---9956999--988999056541147789999869-----91884698621222102344445423-- Q ss_pred HHHEEECCCHH-HHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHH Q ss_conf 68835124201-256877778877477520025280333079999984677024555-5322001788765589999999 Q gi|254780504|r 173 ESQIFRIDHYL-GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVD-YYNNTGALRDMIQNHLLQLLCL 250 (492) Q Consensus 173 E~qiyRIDHYL-GKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~-yyD~~GaiRDmvQNHllQlL~l 250 (492) ...+-+-|.. --+.++.+..+--.+.+- .|.+|.+.+.....-..+.. .-..-|++.|+. -|.+-++.. T Consensus 117 -~~~~~v~~~~r~~p~~~~~~~~i~~g~~G-------~i~~~~~~~~~~~~~~~~~~~~~~~gG~l~d~g-~H~idl~~~ 187 (334) T 2o4u_X 117 -GLFLMEAIWTRFFPASEALRSVLAQGTLG-------DLRVARAEFGKNLTHVPRAVDWAQAGGALLDLG-IYCVQFISM 187 (334) T ss_dssp -TCCEEECCGGGGSHHHHHHHHHHHHTTTC-------SEEEEEEEEECCCTTSHHHHCTTTTCSHHHHTH-HHHHHHHHH T ss_pred -CCCEEEEEECCCCCHHHHHHHHHHCCCCC-------CEEEEEEEEEECCCCCCCCCCCCCCCCEEEECH-HHHHHHHHH T ss_conf -54215764102670688888776438747-------369999998302223344566566887344203-548999999 Q ss_pred H-HCCCCC Q ss_conf 8-718544 Q gi|254780504|r 251 V-AMEMPP 257 (492) Q Consensus 251 v-AMe~P~ 257 (492) + -.+.|. T Consensus 188 l~G~~~~~ 195 (334) T 2o4u_X 188 VFGGQKPE 195 (334) T ss_dssp HTTTCCCS T ss_pred HHCCCCCE T ss_conf 84999738 No 6 >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} Probab=97.40 E-value=0.01 Score=37.96 Aligned_cols=185 Identities=14% Similarity=0.195 Sum_probs=98.4 Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC Q ss_conf 98789986443566765779999999728987578179999888699889999999999874234679989999898516 Q gi|254780504|r 10 NSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLI 89 (492) Q Consensus 10 ~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~ 89 (492) |-.+-|.| +|..+++.+-|++ ... + ++.|+|+.-.+ .+ ..+.+.+.+ T Consensus 8 pirvgiIG-~G~~g~~~~~~~~------~~~-~-~~~l~~i~d~~--~~----------------------~~~~~~~~~ 54 (346) T 3cea_A 8 PLRAAIIG-LGRLGERHARHLV------NKI-Q-GVKLVAACALD--SN----------------------QLEWAKNEL 54 (346) T ss_dssp CEEEEEEC-CSTTHHHHHHHHH------HTC-S-SEEEEEEECSC--HH----------------------HHHHHHHTT T ss_pred CCEEEEEC-CHHHHHHHHHHHH------HCC-C-CCEEEEEECCC--HH----------------------HHHHHHHHC T ss_conf 76699998-8499999999998------549-9-96899998799--99----------------------999999982 Q ss_pred CEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH Q ss_conf 57864678977899888874057678469984069568666777777725876443577605667898899999999987 Q gi|254780504|r 90 FYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRK 169 (492) Q Consensus 90 ~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~ 169 (492) .... -|++ +.++++..+. =+.|.++||..-..++...-+.|. =|.+|||++.|++.|++|.+...+ T Consensus 55 ~~~~-~~~~------~~~ll~~~~v--D~v~I~tp~~~h~~~~~~al~~Gk-----~V~~EKP~a~~~~e~~~l~~~a~~ 120 (346) T 3cea_A 55 GVET-TYTN------YKDMIDTENI--DAIFIVAPTPFHPEMTIYAMNAGL-----NVFCEKPLGLDFNEVDEMAKVIKS 120 (346) T ss_dssp CCSE-EESC------HHHHHTTSCC--SEEEECSCGGGHHHHHHHHHHTTC-----EEEECSCCCSCHHHHHHHHHHHHT T ss_pred CCCC-CCCC------HHHHHCCCCC--CEEEEECHHHHHHHHHHHHHHCCC-----EEEEECCCCCCCCCCHHHHHHHHH T ss_conf 9985-1599------9999648998--889995717658999999986498-----598855742221221156788875 Q ss_pred HCCHHHEEECCCHH-HHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHH----HHHHHHHHHHHHH Q ss_conf 38968835124201-256877778877477520025280333079999984677024555532----2001788765589 Q gi|254780504|r 170 IFKESQIFRIDHYL-GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYN----NTGALRDMIQNHL 244 (492) Q Consensus 170 ~f~E~qiyRIDHYL-GKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD----~~GaiRDmvQNHl 244 (492) . -..++.+.|-+ --+.+|.+--+=-.+.+-+. ..+.....-....-.+...++ ..|++-|+. .|. T Consensus 121 ~--~~~~~~v~~~~r~~p~~~~lk~li~~g~iG~~-------~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~d~g-~H~ 190 (346) T 3cea_A 121 H--PNQIFQSGFMRRYDDSYRYAKKIVDNGDIGKI-------IYMRGYGIDPISGMESFTKFATEADSGGIFVDMN-IHD 190 (346) T ss_dssp C--TTSCEECCCGGGTCHHHHHHHHHHHTTTTCSE-------EEEEEEEEEEGGGHHHHHHHHHHSCCCCHHHHTT-HHH T ss_pred C--CCEEEECCEEECCCHHHHHHHHHHHCCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC-CCH T ss_conf 2--87665413230179999999999987998865-------2223334574101233213475357887772074-008 Q ss_pred HHHHHHH Q ss_conf 9999998 Q gi|254780504|r 245 LQLLCLV 251 (492) Q Consensus 245 lQlL~lv 251 (492) +-++..+ T Consensus 191 id~~~~~ 197 (346) T 3cea_A 191 IDLIRWF 197 (346) T ss_dssp HHHHHHH T ss_pred HHHHHHH T ss_conf 9999997 No 7 >2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043} Probab=97.36 E-value=0.00089 Score=45.51 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=44.8 Q ss_pred HHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 888740576784699840695686667777777258764435776056678988999999999873 Q gi|254780504|r 105 LGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492) Q Consensus 105 L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492) +.++++..+ .=+.|.++||..-..++...-++| .-|.+|||++.+++.|++|.+...+. T Consensus 58 ~~ell~~~~--iDaV~I~tp~~~H~~~~~~al~~g-----k~Vl~EKPla~s~~e~~~l~~~a~~~ 116 (336) T 2p2s_A 58 AEQLITDAS--IDLIACAVIPCDRAELALRTLDAG-----KDFFTAKPPLTTLEQLDAVQRRVAET 116 (336) T ss_dssp HHHHHTCTT--CCEEEECSCGGGHHHHHHHHHHTT-----CEEEECSSCCSCHHHHHHHHHHHHHH T ss_pred HHHHHCCCC--CCEEEEECCHHHHHHHHHHHHHCC-----CEEEECCCCCCCCCCCHHHHHHHHHC T ss_conf 999955999--899999688277899999999859-----90896278532232004689997630 No 8 >1zh8_A Oxidoreductase; TM0312, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: MSE NAP; 2.50A {Thermotoga maritima MSB8} SCOP: c.2.1.3 d.81.1.5 Probab=97.27 E-value=0.0037 Score=41.05 Aligned_cols=116 Identities=17% Similarity=0.264 Sum_probs=70.4 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH Q ss_conf 98987899864435667657799999997289875781799998886998899999999998742346799899998985 Q gi|254780504|r 8 IHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLS 87 (492) Q Consensus 8 ~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~ 87 (492) |.+..+-|.| .|.-+++.-+|+|- .++. .+.|+|+.-. +.+ ..++|.+ T Consensus 16 mk~lrigiIG-~G~~g~~~h~~~l~------~~~~-~~~l~ai~d~--~~~----------------------~~~~~~~ 63 (340) T 1zh8_A 16 LRKIRLGIVG-CGIAARELHLPALK------NLSH-LFEITAVTSR--TRS----------------------HAEEFAK 63 (340) T ss_dssp CCCEEEEEEC-CSHHHHHTHHHHHH------TTTT-TEEEEEEECS--SHH----------------------HHHHHHH T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHH------HCCC-CEEEEEEECC--CHH----------------------HHHHHHH T ss_conf 6688899995-88999999999997------2899-7699999899--999----------------------9999999 Q ss_pred HCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 16578646789778998888740576784699840695686667777777258764435776056678988999999999 Q gi|254780504|r 88 LIFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAIT 167 (492) Q Consensus 88 ~~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l 167 (492) ...... -++ +|+. ++...+ .-+.|+++||+.=..++...-++| .-|.+|||++.+++.+++|-+.. T Consensus 64 ~~~~~~-~~~---~~~e---ll~~~~--iD~V~I~tp~~~H~~~~~~al~ag-----k~Vl~EKP~~~~~~e~~~l~~~a 129 (340) T 1zh8_A 64 MVGNPA-VFD---SYEE---LLESGL--VDAVDLTLPVELNLPFIEKALRKG-----VHVICEKPISTDVETGKKVVELS 129 (340) T ss_dssp HHSSCE-EES---CHHH---HHHSSC--CSEEEECCCGGGHHHHHHHHHHTT-----CEEEEESSSSSSHHHHHHHHHHH T ss_pred HCCCCC-EEC---CHHH---HHCCCC--CCEEEECCCCHHHHHHHHHHHHCC-----CCEEEECCCCCCCCHHHHHHHHH T ss_conf 839983-538---8999---955999--998991387034578999998669-----96576367413211134666677 Q ss_pred HH Q ss_conf 87 Q gi|254780504|r 168 RK 169 (492) Q Consensus 168 ~~ 169 (492) .+ T Consensus 130 ~~ 131 (340) T 1zh8_A 130 EK 131 (340) T ss_dssp HH T ss_pred HH T ss_conf 65 No 9 >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genomics, protein structure initiative, PSI; HET: NAD; 1.95A {Listeria innocua} Probab=97.25 E-value=0.015 Score=36.80 Aligned_cols=333 Identities=15% Similarity=0.151 Sum_probs=155.9 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH Q ss_conf 98987899864435667657799999997289875781799998886998899999999998742346799899998985 Q gi|254780504|r 8 IHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLS 87 (492) Q Consensus 8 ~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~ 87 (492) |....+.|.|+ |.-++ ..+|+|- ..+ ++.|+|+.-. +.+. + +...+ . T Consensus 3 mk~~rigiIG~-G~~g~-~h~~~~~------~~~--~~~l~av~d~--~~~~-~----~~~~~---~------------- 49 (359) T 3e18_A 3 LKKYQLVIVGY-GGMGS-YHVTLAS------AAD--NLEVHGVFDI--LAEK-R----EAAAQ---K------------- 49 (359) T ss_dssp CCCEEEEEECC-SHHHH-HHHHHHH------TST--TEEEEEEECS--SHHH-H----HHHHT---T------------- T ss_pred CCCCCEEEECC-CHHHH-HHHHHHH------HCC--CCEEEEEECC--CHHH-H----HHHHH---C------------- T ss_conf 88771999946-79999-9999998------589--9589999889--9999-9----99986---2------------- Q ss_pred HCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 16578646789778998888740576784699840695686667777777258764435776056678988999999999 Q gi|254780504|r 88 LIFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAIT 167 (492) Q Consensus 88 ~~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l 167 (492) .+. -|++ |+ ++++..+ .=+.+.++||+.-..++...-++| .-|.+|||++.|++.|++|-+.. T Consensus 50 ~~~----~~~~---~~---ell~~~~--iD~V~i~tp~~~h~~~~~~al~~g-----khv~~EKP~a~~~~e~~~l~~~~ 112 (359) T 3e18_A 50 GLK----IYES---YE---AVLADEK--VDAVLIATPNDSHKELAISALEAG-----KHVVCEKPVTMTSEDLLAIMDVA 112 (359) T ss_dssp TCC----BCSC---HH---HHHHCTT--CCEEEECSCGGGHHHHHHHHHHTT-----CEEEEESSCCSSHHHHHHHHHHH T ss_pred CCC----CCCC---HH---HHHCCCC--CCEEEECCCCHHHHHHHHHHHHCC-----CEEEEECCCCCHHHHHHHHHHHH T ss_conf 997----0199---99---9955999--898998788055235678888539-----81999578642087887889999 Q ss_pred HHHCCHHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHH--HHHHHHHHHHHHHH Q ss_conf 87389688351242-0125687777887747752002528033307999998467702455553--22001788765589 Q gi|254780504|r 168 RKIFKESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYY--NNTGALRDMIQNHL 244 (492) Q Consensus 168 ~~~f~E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yy--D~~GaiRDmvQNHl 244 (492) .+. ..++-+.| +.--+.+|-+--+--++. +- -|-+|++...---+..+...+. .+-|++.|+.- |. T Consensus 113 ~~~---~~~~~v~~~~r~~p~~~~~k~~i~~g~-iG------~i~~i~~~~~~~~~~~~~w~~~~~~~gg~l~~~g~-H~ 181 (359) T 3e18_A 113 KRV---NKHFMVHQNRRWDEDFLIIKEMFEQKT-IG------EMFHLESRVHGANGIPGDWRHLKAHGGGMVLDWGV-HL 181 (359) T ss_dssp HHH---TCCEEEECGGGGCHHHHHHHHHHHHTT-TS------SEEEEEEEEECSSCSCSSGGGCGGGTCSHHHHTHH-HH T ss_pred HHC---CCCCCCCCCCCCCCCCHHHHHHHHHCC-CC------CEEEEEEEEECCCCCCCCCCCCCCCCCCEEHHCCC-CC T ss_conf 752---765422222114752202433212214-78------44899999716888994312441037876003132-21 Q ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEE Q ss_conf 99999987185445885899999999997306888112236136521366776873433410147988664874389999 Q gi|254780504|r 245 LQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLEEIPLGISDTETFVAIKA 324 (492) Q Consensus 245 lQlL~lvAMe~P~~~~~~~ir~eK~kvlk~~r~~~~~~v~~~~v~GQY~~~~~~~~~v~gY~~e~~v~~S~TeTfaa~~l 324 (492) +-++..+.=++|.+..+ .+... . +..++.++.+.+ T Consensus 182 iD~~~~l~G~~~~~V~a---------------------------~~~~~-------------~-----~~~~~d~~~~~l 216 (359) T 3e18_A 182 LDQLLFLVDSNVKSVSA---------------------------NLSFA-------------L-----GDEVDDGFVTFI 216 (359) T ss_dssp HHHHHHHCCSCEEEEEE---------------------------EEECT-------------T-----CCSSCSEEEEEE T ss_pred CHHHHHHCCCCCEEEEE---------------------------EEECC-------------C-----CCCCCCCEEEEE T ss_conf 02324222998479999---------------------------86525-------------6-----887562147999 Q ss_pred EECCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCC-CCCCCCCCCCCEEEEEECCCCCE----EEE---EEECCCCC Q ss_conf 97085867857775513346885179999985488643-76665478985699997179650----444---33126888 Q gi|254780504|r 325 NIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTI-FDHQMSKIETNKLILRLQNNGEI----EQF---ITTKDHST 396 (492) Q Consensus 325 ~idn~RW~gVPF~lrtGK~l~~k~~eI~i~FK~~p~~~-f~~~~~~~~~N~Lvi~iqP~~~i----~l~---~~~K~pg~ 396 (492) .-+| |+...+.++-.-..+..++.|..-+ +.+ +.. ......+......... ... ...+.... T Consensus 217 ~f~~----G~~~~l~~s~~~~~~~~~~~i~Gt~--G~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (359) T 3e18_A 217 TFEN----GITAQIEVGTTNFIKLPRWYVKGTE--GTGIIHD----WDLSGEIVKPTALAKTSEPTPIKAGQGLTKTMAP 286 (359) T ss_dssp EETT----SCEEEEEEESSCSSCCCSEEEEETT--EEEEECS----TTCCEEEEEECTTTTTCCCCCEEETTEEESTTSC T ss_pred EECC----CCEEEEEEECCCCCCCCEEEEECCC--CEEEEEC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 9789----9399999875667888608999034--5799805----6655325114543446777631146552101356 Q ss_pred CCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 77445466665530223456898624899999987983358698999984588469999887348 Q gi|254780504|r 397 SNMKLKTTALRICCCSKRIKRTPDGYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIIN 461 (492) Q Consensus 397 ~~~~~~~~~l~~~~~~~~~~~~pdaYe~Ll~D~i~Gd~tlF~r~dEve~sWrivdpiL~~~~~~~ 461 (492) ..... ..... . .........-|+ -+.|+++|+...-+..++...+=++++-+.+..+..+ T Consensus 287 ~~~~~-~~~~~--~-~~~~~~~~~~~~-~f~~aI~~~~~~~~~~edal~~~~i~~a~~~S~~~g~ 346 (359) T 3e18_A 287 PSEEA-TNTLS--L-PAPAKLAPSFYN-NFVDVLNNTSEPIVQNEEVYQVLKLIEAIFEAAETNR 346 (359) T ss_dssp CCGGG-EEEEC--C-CCCCCCCSCHHH-HHHHHHTTSSCCSSCHHHHHHHHHHHHHHHHHHHHTS T ss_pred CCCCC-CCCCC--C-CCCCHHHHHHHH-HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf 44344-43224--5-765326999999-9999995799898999999999999999999997199 No 10 >3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp} Probab=97.20 E-value=0.0067 Score=39.21 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=72.5 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -.+-|.|+ |.-+++...|+|- .+| ++.|+|++-. +.+. .+++...+. T Consensus 8 irvgiIG~-G~~g~~~~~~~l~------~~~--~~~lvav~d~--~~~~----------------------~~~~~~~~~ 54 (364) T 3e82_A 8 INIALIGY-GFVGKTFHAPLIR------SVP--GLNLAFVASR--DEEK----------------------VKRDLPDVT 54 (364) T ss_dssp EEEEEECC-SHHHHHTHHHHHH------TST--TEEEEEEECS--CHHH----------------------HHHHCTTSE T ss_pred CEEEEECC-CHHHHHHHHHHHH------HCC--CCEEEEEECC--CHHH----------------------HHHHCCCCC T ss_conf 85999948-1999999999997------198--9589999889--8999----------------------996477997 Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 78646789778998888740576784699840695686667777777258764435776056678988999999999873 Q gi|254780504|r 91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492) Q Consensus 91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492) . +++ | .++++..+. =+.|.++||..=..++...-++|. -|.+|||++.|++-|++|-+...+. T Consensus 55 ~----~~~---~---~ell~~~~i--D~V~I~tp~~~H~~~~~~al~~gk-----hV~~EKPla~~~~e~~~l~~~a~~~ 117 (364) T 3e82_A 55 V----IAS---P---EAAVQHPDV--DLVVIASPNATHAPLARLALNAGK-----HVVVDKPFTLDMQEARELIALAEEK 117 (364) T ss_dssp E----ESC---H---HHHHTCTTC--SEEEECSCGGGHHHHHHHHHHTTC-----EEEECSCSCSSHHHHHHHHHHHHHT T ss_pred E----ECC---H---HHHHCCCCC--CEEEECCCHHHHHHHHHHHHHCCC-----CCHHCCCCCCCHHHHHHHHHHHHHC T ss_conf 5----799---9---999559999--989982877886788889986499-----5410287411034778999997514 No 11 >3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase family, NAD-binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum ms-1} Probab=97.17 E-value=0.0038 Score=41.01 Aligned_cols=183 Identities=15% Similarity=0.145 Sum_probs=96.6 Q ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH Q ss_conf 89898789986443566765779999999728987578179999888699889999999999874234679989999898 Q gi|254780504|r 7 NIHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFL 86 (492) Q Consensus 7 ~~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~ 86 (492) +-.|-.+.|+|+ |..++ ..+|+|-+ ++ ++.|+|+.=. +. +..+. |. T Consensus 7 ~~~~irv~iiG~-G~~g~-~h~~~~~~------~~--~~eiv~v~d~--~~--------~~~~~--------------~~ 52 (315) T 3c1a_A 7 NNSPVRLALIGA-GRWGK-NYIRTIAG------LP--GAALVRLASS--NP--------DNLAL--------------VP 52 (315) T ss_dssp --CCEEEEEEEC-TTTTT-THHHHHHH------CT--TEEEEEEEES--CH--------HHHTT--------------CC T ss_pred CCCCEEEEEECC-CHHHH-HHHHHHHH------CC--CCEEEEEECC--CH--------HHHHH--------------HC T ss_conf 999938999999-39999-99999971------89--9489999879--99--------99997--------------53 Q ss_pred HHCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHH Q ss_conf 51657864678977899888874057678469984069568666777777725876443577605667898899999999 Q gi|254780504|r 87 SLIFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAI 166 (492) Q Consensus 87 ~~~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~ 166 (492) +.... ++ + +.++++..+ .-+.|+++||..=..++...-++| .=|.+|||++.+++.|++|.+. T Consensus 53 ~~~~~----~~---~---~~ell~~~~--~D~V~I~tp~~~H~~~~~~al~~g-----k~V~~EKPl~~~~~e~~~l~~~ 115 (315) T 3c1a_A 53 PGCVI----ES---D---WRSVVSAPE--VEAVIIATPPATHAEITLAAIASG-----KAVLVEKPLTLDLAEAEAVAAA 115 (315) T ss_dssp TTCEE----ES---S---THHHHTCTT--CCEEEEESCGGGHHHHHHHHHHTT-----CEEEEESSSCSCHHHHHHHHHH T ss_pred CCCCC----CC---C---HHHHHCCCC--CCEEEECCCHHHHHHHHHHHHHHC-----CCHHCCCCCCCHHHHHHHHHHH T ss_conf 57973----59---9---999955999--998999287888799999999613-----2211389821114678888888 Q ss_pred HHHHCCHHHEEECCCHHH-HHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 987389688351242012-5687777887747752002528033307999998467702455553220017887655899 Q gi|254780504|r 167 TRKIFKESQIFRIDHYLG-KEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLL 245 (492) Q Consensus 167 l~~~f~E~qiyRIDHYLG-Ke~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHll 245 (492) ..+. ...+.+-+-.= -+.+|-+.- -+=+...|.+|+....--..-... ..|++.|+. -|.+ T Consensus 116 ~~~~---~~~~~v~~~~r~~~~~~~lk~---------~i~~~g~i~~i~~~~~~~~~~~~~-----~gg~l~d~g-~H~i 177 (315) T 3c1a_A 116 AKAT---GVMVWVEHTQLFNPAWEALKA---------DLTSIGPILAVRSEAGNHGPYRPG-----GVPMLWDWG-AHDV 177 (315) T ss_dssp HHHH---CCCEEEECGGGGCHHHHHHHH---------THHHHCSEEEEEEEEEEECCCCTT-----CCCHHHHHH-HHHH T ss_pred HHHC---CCCCCCCCCCCCCHHHHHHHH---------HHHCCCCCEEEEEEECCCCCCCCC-----CCCEECCCC-CCHH T ss_conf 7641---433312532234878999988---------865058501457874147864588-----862403566-6628 Q ss_pred HHHHHHHCCCCCC Q ss_conf 9999987185445 Q gi|254780504|r 246 QLLCLVAMEMPPS 258 (492) Q Consensus 246 QlL~lvAMe~P~~ 258 (492) .++..+.=++|.+ T Consensus 178 d~~~~l~g~~~~~ 190 (315) T 3c1a_A 178 SMVLDLMGRDPDS 190 (315) T ss_dssp HHHHHHHSSCCSE T ss_pred HHHHHHHCCCCEE T ss_conf 8999985999549 No 12 >3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A* Probab=97.11 E-value=0.02 Score=35.81 Aligned_cols=187 Identities=15% Similarity=0.115 Sum_probs=103.9 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +-|+| +|--+++ -++++.+ .. + .+.|+|+.=. +.+ ..+.|.+....- T Consensus 5 v~iiG-~G~~g~~-h~~~~~~-----~~-~-~~~l~~v~d~--~~~----------------------~~~~~~~~~~~~ 51 (344) T 3mz0_A 5 IGVIG-TGAIGKE-HINRITN-----KL-S-GAEIVAVTDV--NQE----------------------AAQKVVEQYQLN 51 (344) T ss_dssp EEEEC-CSHHHHH-HHHHHHH-----TC-S-SEEEEEEECS--SHH----------------------HHHHHHHHTTCC T ss_pred EEEEC-CHHHHHH-HHHHHHH-----CC-C-CCEEEEEECC--CHH----------------------HHHHHHHHHCCC T ss_conf 99999-8299999-9999984-----28-9-9689999899--999----------------------999999985899 Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) .--+++ +.++++.. ..-+.+.++||..=..++...-++| .-|.+|||++.|++.|++|-+...+.=. T Consensus 52 ~~~~~~------~~~ll~~~--~~D~V~i~tp~~~H~~~~~~al~~g-----khv~~EKP~a~~~~e~~~l~~~a~~~~~ 118 (344) T 3mz0_A 52 ATVYPN------DDSLLADE--NVDAVLVTSWGPAHESSVLKAIKAQ-----KYVFCEKPLATTAEGCMRIVEEEIKVGK 118 (344) T ss_dssp CEEESS------HHHHHHCT--TCCEEEECSCGGGHHHHHHHHHHTT-----CEEEECSCSCSSHHHHHHHHHHHHHHSS T ss_pred CCEECC------HHHHHCCC--CCCEEEECCCCCCHHHHHHHHHHCC-----CCEEECCCCCCCCHHHHHHHHHHHHHCC T ss_conf 806799------99995599--9888996265211599999998549-----9726468742120047899999875204 Q ss_pred HHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 688351242-0125687777887747752002528033307999998467702455553220017887655899999998 Q gi|254780504|r 173 ESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLCLV 251 (492) Q Consensus 173 E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHllQlL~lv 251 (492) .+..+.| |.--+.+|.+--+=-.+.+-+ +.++++...-. .++..|..-|++.|+. .|.+-++..+ T Consensus 119 --~~~~v~~~~R~~p~~~~~k~~i~~g~~g~-------~~~~~~~~~~~----~~~~~~~~gg~l~d~g-~H~ldl~~~l 184 (344) T 3mz0_A 119 --RLVQVGFMRRYDSGYVQLKEALDNHVIGE-------PLMIHCAHRNP----TVGDNYTTDMAVVDTL-VHEIDVLHWL 184 (344) T ss_dssp --CCEEECCGGGGSHHHHHHHHHHHTTTTSS-------EEEEEEEEECS----CCCTTCCTTHHHHTTT-HHHHHHHHHH T ss_pred --CEEEEEEEEEECHHHHHHHHHHHHHCCCC-------CCCCEECCCCC----CCCCCCCCCEEHHHCC-HHHHHHHHHH T ss_conf --30575421220137899999876412575-------32210012478----7774434431011215-0157899998 Q ss_pred HCCCCCCC Q ss_conf 71854458 Q gi|254780504|r 252 AMEMPPSV 259 (492) Q Consensus 252 AMe~P~~~ 259 (492) .-++|.+. T Consensus 185 ~g~~~~~V 192 (344) T 3mz0_A 185 VNDDYESV 192 (344) T ss_dssp HTCCEEEE T ss_pred HCCCCEEE T ss_conf 49997499 No 13 >1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5 Probab=97.09 E-value=0.0082 Score=38.59 Aligned_cols=118 Identities=10% Similarity=0.209 Sum_probs=71.7 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) .+-|.|+ |.-|+|-..|+|. .++ ++.++.++|. .+. .++|.+...- T Consensus 4 rigiiG~-G~~a~~~h~~~l~------~~~--~~~l~~~d~~---~~~----------------------~~~~a~~~~~ 49 (323) T 1xea_A 4 KIAMIGL-GDIAQKAYLPVLA------QWP--DIELVLCTRN---PKV----------------------LGTLATRYRV 49 (323) T ss_dssp EEEEECC-CHHHHHTHHHHHT------TST--TEEEEEECSC---HHH----------------------HHHHHHHTTC T ss_pred EEEEEEC-CHHHHHHHHHHHH------HCC--CCEEEEEECC---HHH----------------------HHHHHHHCCC T ss_conf 7999928-8999999999998------198--9689999899---999----------------------9999998399 Q ss_pred EECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC Q ss_conf 86467897789988887405767846998406956866677777772587644357760566789889999999998738 Q gi|254780504|r 92 INLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIF 171 (492) Q Consensus 92 ~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f 171 (492) .--+++ |+ ++++. + .-+.|.++||..=..++...-++| .-|.+|||++.+++.|++|-+...+. T Consensus 50 -~~~~~~---~~---~ll~~-~--iD~V~I~tp~~~H~~~~~~al~~G-----khVl~EKP~a~~~~e~~~l~~~a~~~- 113 (323) T 1xea_A 50 -SATCTD---YR---DVLQY-G--VDAVMIHAATDVHSTLAAFFLHLG-----IPTFVDKPLAASAQECENLYELAEKH- 113 (323) T ss_dssp -CCCCSS---TT---GGGGG-C--CSEEEECSCGGGHHHHHHHHHHTT-----CCEEEESCSCSSHHHHHHHHHHHHHT- T ss_pred -CCEECC---HH---HHHCC-C--CCEEEEECCCHHHHHHHHHHHHCC-----CCEEEECCCCCCHHHHCCCCCCCCCC- T ss_conf -841088---99---99558-9--999998178267799999998638-----96687457644255521210111134- Q ss_pred CHHHEEECCC Q ss_conf 9688351242 Q gi|254780504|r 172 KESQIFRIDH 181 (492) Q Consensus 172 ~E~qiyRIDH 181 (492) ..++-+.| T Consensus 114 --~~~~~v~~ 121 (323) T 1xea_A 114 --HQPLYVGF 121 (323) T ss_dssp --TCCEEEEC T ss_pred --CCCCCCCC T ss_conf --55332332 No 14 >3db2_A Putative NADPH-dependent oxidoreductase; ZP_01370612.1, structural genomics, joint center for structural genomics, JCSG; 1.70A {Desulfitobacterium hafniense dcb-2} Probab=97.06 E-value=0.0083 Score=38.55 Aligned_cols=189 Identities=15% Similarity=0.139 Sum_probs=100.2 Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH Q ss_conf 89878998644356676577999999972898757817999988869988999999999987423467998999989851 Q gi|254780504|r 9 HNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSL 88 (492) Q Consensus 9 ~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~ 88 (492) +|-.+-|.|+ |.-+++ .+|+|- ..+ ++.|+|++-.+ . +..++|.+. T Consensus 4 ~~lrvgiIG~-G~~~~~-h~~~~~------~~~--~~~v~~v~d~~--~----------------------~~~~~~~~~ 49 (354) T 3db2_A 4 NPVGVAAIGL-GRWAYV-MADAYT------KSE--KLKLVTCYSRT--E----------------------DKREKFGKR 49 (354) T ss_dssp CCEEEEEECC-SHHHHH-HHHHHT------TCS--SEEEEEEECSS--H----------------------HHHHHHHHH T ss_pred CCCEEEEECC-CHHHHH-HHHHHH------HCC--CCEEEEEECCC--H----------------------HHHHHHHHH T ss_conf 9844999938-399999-999998------589--94899998899--9----------------------999999998 Q ss_pred CCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH Q ss_conf 65786467897789988887405767846998406956866677777772587644357760566789889999999998 Q gi|254780504|r 89 IFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITR 168 (492) Q Consensus 89 ~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~ 168 (492) ... . -+ .+|+. +++..+ .-+.+.++||..=..++...-++| .-|.+|||++.+++.|++|-+... T Consensus 50 ~~~-~-~~---~~~~~---ll~~~~--iD~V~i~tp~~~h~~~~~~al~~g-----k~V~~EKP~a~~~~e~~~l~~~a~ 114 (354) T 3db2_A 50 YNC-A-GD---ATMEA---LLARED--VEMVIITVPNDKHAEVIEQCARSG-----KHIYVEKPISVSLDHAQRIDQVIK 114 (354) T ss_dssp HTC-C-CC---SSHHH---HHHCSS--CCEEEECSCTTSHHHHHHHHHHTT-----CEEEEESSSCSSHHHHHHHHHHHH T ss_pred HCC-C-CC---CCHHH---HHCCCC--CCEEEECCCHHHHHHHHHHHHHCC-----CEEEEECCCCCCHHHHHHHHHHHH T ss_conf 199-8-33---89999---956999--988998797788888899999789-----979996686432378888888998 Q ss_pred HHCCHHHEEECCCH-HHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCH-----HHHHH-HHHHHHHHHHHH Q ss_conf 73896883512420-125687777887747752002528033307999998467702-----45555-322001788765 Q gi|254780504|r 169 KIFKESQIFRIDHY-LGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVE-----DRVDY-YNNTGALRDMIQ 241 (492) Q Consensus 169 ~~f~E~qiyRIDHY-LGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gve-----gR~~y-yD~~GaiRDmvQ 241 (492) +. .-.+.+.|- .--+.+|-+--+--.+.+= .|-+|+..+...-+.+ .|..+ .-.-|++.|+. T Consensus 115 ~~---~~~~~v~~~~r~~p~~~~~~~li~~g~iG-------~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~gG~l~d~~- 183 (354) T 3db2_A 115 ET---GVKFLCGHSSRRLGALRKMKEMIDTKEIG-------EVSSIEAVFSNERGLELKKGNWRGEPATAPGGPLTQLG- 183 (354) T ss_dssp HH---CCCEEEECGGGGSHHHHHHHHHHHTTTTC-------CEEEEEEEEECSGGGTCCTTCGGGCTTTSTTTHHHHTH- T ss_pred HC---CCCCCCCEEEEEHHHHHHHHHHHCCCCCC-------CEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCC- T ss_conf 60---77642221000014667777751123457-------50346789831678654565534574458985353234- Q ss_pred HHHHHHHHHHHCCCCCC Q ss_conf 58999999987185445 Q gi|254780504|r 242 NHLLQLLCLVAMEMPPS 258 (492) Q Consensus 242 NHllQlL~lvAMe~P~~ 258 (492) -|.+-++..+. .+|.+ T Consensus 184 ~H~id~~~~l~-G~~~~ 199 (354) T 3db2_A 184 VHQIDNLQFLL-GPVAR 199 (354) T ss_dssp HHHHHHHHHHH-CCEEE T ss_pred CCHHHHHHHHH-CCCEE T ss_conf 43688899986-99619 No 15 >1tlt_A Putative oxidoreductase (virulence factor MVIM homolog); structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5 Probab=97.05 E-value=0.0073 Score=38.94 Aligned_cols=175 Identities=14% Similarity=0.151 Sum_probs=93.9 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -.+-|.|+ |.-+++-.+|+|- ..+ ++.|+|+.-.+... .++|.+... T Consensus 6 ikigiiG~-G~~~~~~~~~~l~------~~~--~~~l~av~d~~~~~------------------------~~~~~~~~~ 52 (319) T 1tlt_A 6 LRIGVVGL-GGIAQKAWLPVLA------AAS--DWTLQGAWSPTRAK------------------------ALPICESWR 52 (319) T ss_dssp EEEEEECC-STHHHHTHHHHHH------SCS--SEEEEEEECSSCTT------------------------HHHHHHHHT T ss_pred CEEEEEEC-CHHHHHHHHHHHH------HCC--CCEEEEEECCCHHH------------------------HHHHHHHHC T ss_conf 88999938-8999999999997------399--96899998899999------------------------999999829 Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 78646789778998888740576784699840695686667777777258764435776056678988999999999873 Q gi|254780504|r 91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492) Q Consensus 91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492) ++ -+++ ++.|.+ +. . +.|.++||..=..++...-++| .-|.+|||++.|++.|++|.+...+. T Consensus 53 -~~-~~~~---~~~l~~-----~~-D-~V~I~tp~~~H~~~~~~al~~g-----khv~~EKP~~~~~~e~~~l~~~~~~~ 115 (319) T 1tlt_A 53 -IP-YADS---LSSLAA-----SC-D-AVFVHSSTASHFDVVSTLLNAG-----VHVCVDKPLAENLRDAERLVELAARK 115 (319) T ss_dssp -CC-BCSS---HHHHHT-----TC-S-EEEECSCTTHHHHHHHHHHHTT-----CEEEEESSSCSSHHHHHHHHHHHHHT T ss_pred -CC-CCCC---HHHHHC-----CC-C-EEEEECCCHHHHHHHHHHHHCC-----CEEEEECCCHHHHHHHHHHHHHHHHC T ss_conf -98-2288---999856-----99-9-9999488666689999998619-----87999636502466777777776503 Q ss_pred CCHHHEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 89688351242012568777788774775200252803330799999846770245555322001788765589999999 Q gi|254780504|r 171 FKESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLCL 250 (492) Q Consensus 171 f~E~qiyRIDHYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHllQlL~l 250 (492) .-.+-+-| ..||. +.+.-+ ++.|++-++---+..- ..+...++..|++.|+. -|.+-++.. T Consensus 116 ---~~~~~v~~-----------~~r~~-p~~~~~--k~~i~~g~~g~i~~~r-~~~~~~~~~~~~l~d~~-~H~iDl~~~ 176 (319) T 1tlt_A 116 ---KLTLMVGF-----------NRRFA-PLYGEL--KTQLATAASLRMDKHR-SNSVGPHDLYFTLLDDY-LHVVDTALW 176 (319) T ss_dssp ---TCCEEEEC-----------GGGGC-HHHHHH--TTTGGGCCEEEEEECC-SSCCCSSCHHHHHHHTH-HHHHHHHHH T ss_pred ---CCEEEEEE-----------CCCCC-HHHHHH--HHHHHHCCCCEEEEEE-CCCCCCCCCCCCCHHCC-CHHHHHHHH T ss_conf ---63168863-----------13468-699999--9999734562599997-36779998774125204-359999999 Q ss_pred HHCC Q ss_conf 8718 Q gi|254780504|r 251 VAME 254 (492) Q Consensus 251 vAMe 254 (492) +.-+ T Consensus 177 l~g~ 180 (319) T 1tlt_A 177 LSGG 180 (319) T ss_dssp HTTT T ss_pred HCCC T ss_conf 6199 No 16 >3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica} Probab=96.96 E-value=0.027 Score=34.88 Aligned_cols=189 Identities=11% Similarity=0.138 Sum_probs=102.6 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +-|.|+ |--++....|+|-. +| ++.|+|+.-. +.+ ..+.+.+.... T Consensus 5 vgiIG~-G~~g~~~~~~~l~~------~~--~~~l~av~d~--~~~----------------------~~~~~~~~~~~- 50 (387) T 3moi_A 5 FGICGL-GFAGSVLMAPAMRH------HP--DAQIVAACDP--NED----------------------VRERFGKEYGI- 50 (387) T ss_dssp EEEECC-SHHHHTTHHHHHHH------CT--TEEEEEEECS--CHH----------------------HHHHHHHHHTC- T ss_pred EEEECC-CHHHHHHHHHHHHH------CC--CEEEEEEECC--CHH----------------------HHHHHHHHHCC- T ss_conf 999989-69999999999973------97--9199999879--999----------------------99999998599- Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) . -++ +|+.| ++..+ .=+.+.++||..=..++...-++| .-|.+|||++.|++-|++|-+...+. T Consensus 51 ~-~~~---~~~el---l~~~~--vD~V~i~tp~~~H~~~~~~al~~g-----khV~~EKPla~~~~ea~~l~~~a~~~-- 114 (387) T 3moi_A 51 P-VFA---TLAEM---MQHVQ--MDAVYIASPHQFHCEHVVQASEQG-----LHIIVEKPLTLSRDEADRMIEAVERA-- 114 (387) T ss_dssp C-EES---SHHHH---HHHSC--CSEEEECSCGGGHHHHHHHHHHTT-----CEEEECSCCCSCHHHHHHHHHHHHHH-- T ss_pred C-EEC---CHHHH---HCCCC--CCEEEECCCCHHHHHHHHHHHHHC-----CCEECCCCCCCCHHHHHHHHHHHHHH-- T ss_conf 8-589---99999---65999--988999089678999999998618-----95653788879999999999999980-- Q ss_pred HHHEEECCCHH-HHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCH--HHHHHH--HHHHHHHHHHHHHHHHH Q ss_conf 68835124201-25687777887747752002528033307999998467702--455553--22001788765589999 Q gi|254780504|r 173 ESQIFRIDHYL-GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVE--DRVDYY--NNTGALRDMIQNHLLQL 247 (492) Q Consensus 173 E~qiyRIDHYL-GKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gve--gR~~yy--D~~GaiRDmvQNHllQl 247 (492) .-++.+.|=. --+.++-+--+--.+.+ - -|.+|........... ....++ ..-|++.|+.- |++.+ T Consensus 115 -g~~~~v~~~~r~~p~~~~~k~~i~~g~i-----G--~i~~i~~~~~~~~~~~~~~~~~~~~~~ggG~l~d~~~-H~id~ 185 (387) T 3moi_A 115 -GVHLVVGTSRSHDPVVRTLRAIVQEGSV-----G--RVSMLNCFNYTDFLYRPRRPEELDTSKGGGIIYNQLP-HQIDS 185 (387) T ss_dssp -TCCEEECCCGGGSHHHHHHHHHHHHCTT-----C--CEEEEEEEEECCGGGSCCCGGGGCGGGTCSHHHHTHH-HHHHH T ss_pred -CCEEEEEECCCCCHHHHHHHHHHHCCCC-----C--CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHH T ss_conf -9948972223368489999998734886-----6--1466553203676556643333443578872445102-07999 Q ss_pred HHHHHCCCCCCCC Q ss_conf 9998718544588 Q gi|254780504|r 248 LCLVAMEMPPSVE 260 (492) Q Consensus 248 L~lvAMe~P~~~~ 260 (492) +..+.=.+|.+.. T Consensus 186 ~~~~~G~~~~~v~ 198 (387) T 3moi_A 186 IKTITGQRITAVR 198 (387) T ss_dssp HHHHHCCCEEEEE T ss_pred HHHHHCCCCEEEE T ss_conf 9998299957999 No 17 >3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12} Probab=96.93 E-value=0.028 Score=34.72 Aligned_cols=182 Identities=15% Similarity=0.127 Sum_probs=99.4 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +=|+|+ |--+++..+|++ ..++. .+.+.++.++.-..+.+. + +| ..... T Consensus 5 igiIG~-G~~~~~~hl~~~------~~~~~-~~~v~~v~~~~~~~~~~~-----------~----------~~-~~~~~- 53 (345) T 3f4l_A 5 CAFIGF-GKSTTRYHLPYV------LNRKD-SWHVAHIFRRHAKPEEQA-----------P----------IY-SHIHF- 53 (345) T ss_dssp EEEECC-SHHHHHHTHHHH------TTCTT-TEEEEEEECSSCCGGGGS-----------G----------GG-TTCEE- T ss_pred EEEEEC-CHHHHHHHHHHH------HCCCC-CEEEEEEECCHHHHHHHH-----------H----------HC-CCCCE- T ss_conf 999956-699999999999------75999-769999989889999999-----------8----------75-99936- Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) +++ +.++++..+ .=+.|.++||..=..++...-++| .-|.+|||++.|++.|++|-+...+. T Consensus 54 ---~~~------~~ell~~~~--~D~V~I~tp~~~H~~~~~~al~~g-----khV~~EKP~a~~~~e~~~l~~~a~~~-- 115 (345) T 3f4l_A 54 ---TSD------LDEVLNDPD--VKLVVVCTHADSHFEYAKRALEAG-----KNVLVEKPFTPTLAQAKELFALAKSK-- 115 (345) T ss_dssp ---ESC------THHHHTCTT--EEEEEECSCGGGHHHHHHHHHHTT-----CEEEECSSSCSSHHHHHHHHHHHHHH-- T ss_pred ---ECC------HHHHHCCCC--CCEEEECCCHHHHHHHHHHHHHCC-----CEEEECCCCHHHHHHHHHHHHCCCCC-- T ss_conf ---799------999956999--988999588699899999999859-----90984343101256665433011236-- Q ss_pred HHHEEECC-CHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 68835124-20125687777887747752002528033307999998467702455553220017887655899999998 Q gi|254780504|r 173 ESQIFRID-HYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLCLV 251 (492) Q Consensus 173 E~qiyRID-HYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHllQlL~lv 251 (492) .-...+- ++.--+.+|-+..+-=.+.+- .|.+|+..+.-.-............|++-|+.- |.+-++..+ T Consensus 116 -~~~~~v~~~~r~~p~~~~~k~~i~~g~ig-------~i~~i~~~~~~~~~~~~~~~~~~~gg~l~d~g~-H~id~~~~l 186 (345) T 3f4l_A 116 -GLTVTPYQNRRFDSCFLTAKKAIESGKLG-------EIVEVESHFDYYRPVAETKPGLPQDGAFYGLGV-HTMDQIISL 186 (345) T ss_dssp -TCCEEECCGGGGCHHHHHHHHHHHHSTTC-------SEEEEEEECCCBCCCCCCCCCCGGGSHHHHTHH-HHHHHHHHH T ss_pred -CCCCCCCCCCCCCCHHHHHHHHHCCCCEE-------EEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHH T ss_conf -74320121244572688888760179663-------333322342122233344553335630124551-299999996 Q ss_pred H Q ss_conf 7 Q gi|254780504|r 252 A 252 (492) Q Consensus 252 A 252 (492) . T Consensus 187 ~ 187 (345) T 3f4l_A 187 F 187 (345) T ss_dssp H T ss_pred H T ss_conf 0 No 18 >3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A Probab=96.86 E-value=0.012 Score=37.40 Aligned_cols=111 Identities=15% Similarity=0.238 Sum_probs=69.5 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +-|.|+ |.-+++...|+|- .. + ++.|+|++-.+.... . +...+ .. . +. + T Consensus 5 vgiIG~-G~~~~~~h~~~~~------~~-~-~~~lvav~d~~~~~~--~----~~~~~---~~-----------~-~~-~ 53 (349) T 3i23_A 5 MGFIGF-GKSANRYHLPYVM------IR-E-TLEVKTIFDLHVNEK--A----AAPFK---EK-----------G-VN-F 53 (349) T ss_dssp EEEECC-SHHHHHTTHHHHT------TC-T-TEEEEEEECTTCCHH--H----HHHHH---TT-----------T-CE-E T ss_pred EEEECC-CHHHHHHHHHHHH------CC-C-CCEEEEEEECCHHHH--H----HHHHH---CC-----------C-CC-E T ss_conf 999988-0999999999996------19-8-978999990999999--9----99755---38-----------9-93-5 Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 646789778998888740576784699840695686667777777258764435776056678988999999999873 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492) +++ +.++++..+. -+.+.++||+.-..++...-++| .-|.+|||++.+++.+++|-+...+. T Consensus 54 ---~~~------~~ell~~~~i--D~V~i~tp~~~H~~~~~~al~ag-----khV~~EKP~a~~~~e~~~l~~~~~~~ 115 (349) T 3i23_A 54 ---TAD------LNELLTDPEI--ELITICTPAHTHYDLAKQAILAG-----KSVIVEKPFCDTLEHAEELFALGQEK 115 (349) T ss_dssp ---ESC------THHHHSCTTC--CEEEECSCGGGHHHHHHHHHHTT-----CEEEECSCSCSSHHHHHHHHHHHHHT T ss_pred ---ECC------HHHHHCCCCC--CEEEECCCHHHHHHHHHHHHHCC-----CEEEEECCCCCHHHHCCCHHHHHHHC T ss_conf ---799------9999659998--88998887145678899999849-----91875177420022102202345426 No 19 >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} Probab=96.73 E-value=0.039 Score=33.69 Aligned_cols=190 Identities=21% Similarity=0.186 Sum_probs=100.9 Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC Q ss_conf 98789986443566765779999999728987578179999888699889999999999874234679989999898516 Q gi|254780504|r 10 NSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLI 89 (492) Q Consensus 10 ~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~ 89 (492) .-.+=|.| +|.-+++ ..|+|-. ++ ++.++|+.=.+ ++..+.|.+.. T Consensus 5 kir~giIG-~G~i~~~-h~~~l~~------~~--~~~l~av~d~~------------------------~~~~~~~a~~~ 50 (330) T 3e9m_A 5 KIRYGIMS-TAQIVPR-FVAGLRE------SA--QAEVRGIASRR------------------------LENAQKMAKEL 50 (330) T ss_dssp CEEEEECS-CCTTHHH-HHHHHHH------SS--SEEEEEEBCSS------------------------SHHHHHHHHHT T ss_pred CCEEEEEC-CHHHHHH-HHHHHHH------CC--CCEEEEEECCC------------------------HHHHHHHHHHC T ss_conf 85899998-8399999-9999974------89--92899998899------------------------99999999983 Q ss_pred CEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH Q ss_conf 57864678977899888874057678469984069568666777777725876443577605667898899999999987 Q gi|254780504|r 90 FYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRK 169 (492) Q Consensus 90 ~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~ 169 (492) ... --++ +|+.| ++..+ .-++|.++||..=..++...-++|. -|.+|||++.+++.|++|-+...+ T Consensus 51 ~~~-~~~~---~~~~l---l~~~~--iD~V~I~tp~~~H~~~~~~al~~gk-----~v~~EKPl~~~~~e~~~l~~~~~~ 116 (330) T 3e9m_A 51 AIP-VAYG---SYEEL---CKDET--IDIIYIPTYNQGHYSAAKLALSQGK-----PVLLEKPFTLNAAEAEELFAIAQE 116 (330) T ss_dssp TCC-CCBS---SHHHH---HHCTT--CSEEEECCCGGGHHHHHHHHHHTTC-----CEEECSSCCSSHHHHHHHHHHHHH T ss_pred CCC-EECC---CHHHH---HCCCC--CCEEEECCCHHHHHHHHHHHHHCCC-----CEEECCCCHHHHHHHHHHHHHHHH T ss_conf 998-0419---99999---54899--9989989970768999999998599-----576403211225677889999986 Q ss_pred HCCHHHEEECC-CHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHH-HHH---HHHHHHHHHHHHH Q ss_conf 38968835124-201256877778877477520025280333079999984677024555-532---2001788765589 Q gi|254780504|r 170 IFKESQIFRID-HYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVD-YYN---NTGALRDMIQNHL 244 (492) Q Consensus 170 ~f~E~qiyRID-HYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~-yyD---~~GaiRDmvQNHl 244 (492) . .-+.-+. .+..-+.++.+--+--.+.+-+ |-+|.....-. -.++.. +++ .-|++-|+. -|. T Consensus 117 ~---~~~~~v~~~~r~~p~~~~~k~~i~~~~iG~-------i~~~~~~~~~~--~~~~~~w~~~~~~gGg~l~d~~-~H~ 183 (330) T 3e9m_A 117 Q---GVFLMEAQKSVFLPITQKVKATIQEGGLGE-------ILWVQSVTAYP--NVDHIPWFYSREAGGGALHGSG-SYP 183 (330) T ss_dssp T---TCCEEECCSGGGCHHHHHHHHHHHTTTTCS-------EEEEEEEEEES--CCTTCGGGGCTTTTCSHHHHHS-HHH T ss_pred H---CCCEEEEECCCCCCCHHHHHHHHHCCCCCC-------EEEEEEEECCC--CCCCCCCCCCHHHCCCEEEECC-CCC T ss_conf 3---541121001245763134444665178661-------37876664258--8664211357532887673055-321 Q ss_pred HHHHHHHHCCCCCCCC Q ss_conf 9999998718544588 Q gi|254780504|r 245 LQLLCLVAMEMPPSVE 260 (492) Q Consensus 245 lQlL~lvAMe~P~~~~ 260 (492) +.++..+.=++|.+.. T Consensus 184 id~~~~l~G~~~~~v~ 199 (330) T 3e9m_A 184 LQYLQYVLGKEIQEVT 199 (330) T ss_dssp HHHHHHHHTCCEEEEE T ss_pred HHHHHHHHCCCCEEEE T ss_conf 1667987399850999 No 20 >3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative; 2.00A {Streptococcus agalactiae serogroup V} Probab=96.63 E-value=0.0065 Score=39.31 Aligned_cols=111 Identities=16% Similarity=0.274 Sum_probs=67.7 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) -+=|.|+ |..+++ .+|+|-. ++ ++.|+|+.-...+.. +.|.+.... T Consensus 7 k~giIG~-G~i~~~-h~~~l~~------~~--~~~v~~v~d~~~~~~------------------------~~~a~~~~~ 52 (329) T 3evn_A 7 RYGVVST-AKVAPR-FIEGVRL------AG--NGEVVAVSSRTLESA------------------------QAFANKYHL 52 (329) T ss_dssp EEEEEBC-CTTHHH-HHHHHHH------HC--SEEEEEEECSCSSTT------------------------CC---CCCC T ss_pred EEEEECC-HHHHHH-HHHHHHH------CC--CCEEEEEECCCHHHH------------------------HHHHHHCCC T ss_conf 8999988-499999-9999986------89--928999988999999------------------------999998599 Q ss_pred EECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 8646789778998888740576784699840695686667777777258764435776056678988999999999873 Q gi|254780504|r 92 INLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492) Q Consensus 92 ~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492) +..|..+.++++..+ .-+.|+++||..=..++...-++| .-|.+|||.+.|++.|++|.+...+. T Consensus 53 -------~~~~~~~~~ll~~~~--~D~V~I~tp~~~H~~~~~~al~~g-----k~vl~EKP~a~~~~e~~~l~~~~~~~ 117 (329) T 3evn_A 53 -------PKAYDKLEDMLADES--IDVIYVATINQDHYKVAKAALLAG-----KHVLVEKPFTLTYDQANELFALAESC 117 (329) T ss_dssp -------SCEESCHHHHHTCTT--CCEEEECSCGGGHHHHHHHHHHTT-----CEEEEESSCCSSHHHHHHHHHHHHHT T ss_pred -------CCEECCHHHHHCCCC--CCEEEECCCHHHHHHHHHHHHHCC-----CEEEEEECCCCCHHHHHHHHHHHHHC T ss_conf -------806689999962889--888990582665557789999879-----98999724545589986544455313 No 21 >1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A Probab=96.62 E-value=0.013 Score=37.25 Aligned_cols=192 Identities=17% Similarity=0.230 Sum_probs=95.7 Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH Q ss_conf 89878998644356676577999999972898757817999988869988999999999987423467998999989851 Q gi|254780504|r 9 HNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSL 88 (492) Q Consensus 9 ~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~ 88 (492) ++--+-|.| +|--++ ..+|+|-. . + ++.|++++-. +.+. .++|... T Consensus 5 ~~irvgiiG-~G~~~~-~~~~~l~~------~-~-~~elvav~d~--~~~~----------------------~~~~a~~ 50 (362) T 1ydw_A 5 TQIRIGVMG-CADIAR-KVSRAIHL------A-P-NATISGVASR--SLEK----------------------AKAFATA 50 (362) T ss_dssp -CEEEEEES-CCTTHH-HHHHHHHH------C-T-TEEEEEEECS--SHHH----------------------HHHHHHH T ss_pred CCCEEEEEC-CCHHHH-HHHHHHHH------C-C-CCEEEEEECC--CHHH----------------------HHHHHHH T ss_conf 961899996-829999-99999985------8-9-9889999879--9999----------------------9999998 Q ss_pred CCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH Q ss_conf 65786467897789988887405767846998406956866677777772587644357760566789889999999998 Q gi|254780504|r 89 IFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITR 168 (492) Q Consensus 89 ~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~ 168 (492) ..+-.. ..--.+|+ ++++..+ .-+.+.++||..=..++...-++| .-|.+|||++.|++.|++|-+... T Consensus 51 ~~~~~~-~~~~~d~~---ell~~~~--iD~V~I~tp~~~H~~~~~~al~aG-----khVl~EKPla~~~~ea~~l~~~a~ 119 (362) T 1ydw_A 51 NNYPES-TKIHGSYE---SLLEDPE--IDALYVPLPTSLHVEWAIKAAEKG-----KHILLEKPVAMNVTEFDKIVDACE 119 (362) T ss_dssp TTCCTT-CEEESSHH---HHHHCTT--CCEEEECCCGGGHHHHHHHHHTTT-----CEEEECSSCSSSHHHHHHHHHHHH T ss_pred HCCCCC-CEECCCHH---HHHCCCC--CCEEEEECCCHHHHHHHHHHHHCC-----CEEEEECCCCCHHHHHHHHHHHHH T ss_conf 499855-56538999---9964999--888999588268899999999769-----859994781000467899999986 Q ss_pred HHCCHHHEEECCCHHHHHHHHHHHHHHHCCCC---CHHHHCCCC---EEEEEEEEEECCCCH---HHHHHH---HHHHHH Q ss_conf 73896883512420125687777887747752---002528033---307999998467702---455553---220017 Q gi|254780504|r 169 KIFKESQIFRIDHYLGKEAVQGLMVFRFANTF---YESLWNNKY---IDHVQITTAETIGVE---DRVDYY---NNTGAL 236 (492) Q Consensus 169 ~~f~E~qiyRIDHYLGKe~vqnil~lRFaN~~---~e~~WNr~~---I~~VqIt~~E~~gve---gR~~yy---D~~Gai 236 (492) +. .-...+.| ..||.-.+ .+-|=+... |.+|+..+.-...-. .-..++ ...|+| T Consensus 120 ~~---~~~~~v~~-----------~~r~~p~~~~~~~~i~~~g~iG~i~~i~~~~~~~~~~~~~~~~~~~~~~~~ggG~l 185 (362) T 1ydw_A 120 AN---GVQIMDGT-----------MWVHNPRTALLKEFLSDSERFGQLKTVQSCFSFAGDEDFLKNDIRVKPGLDGLGAL 185 (362) T ss_dssp TT---TCCEEECC-----------CGGGSGGGTTTTTGGGCTTTTCSEEEEEEEEEEECCHHHHHHCGGGCTTSSTTHHH T ss_pred HH---CCCCCCEE-----------CCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC T ss_conf 30---22441000-----------01257388888888653114676169998621477654443212367334799755 Q ss_pred HHHHHHHHHHHHHHHH-CCCCCCCC Q ss_conf 8876558999999987-18544588 Q gi|254780504|r 237 RDMIQNHLLQLLCLVA-MEMPPSVE 260 (492) Q Consensus 237 RDmvQNHllQlL~lvA-Me~P~~~~ 260 (492) -||- -|.+.++.++. .+.|.+.. T Consensus 186 ~d~g-~H~id~~~~~~~~~~p~~V~ 209 (362) T 1ydw_A 186 GDAG-WYAIRATLLANNFELPKTVT 209 (362) T ss_dssp HHTH-HHHHHHHHHHTTTCCCSEEE T ss_pred CCCE-EHHHHHHHHHCCCCCCEEEE T ss_conf 4523-46999999961899966999 No 22 >2ho3_A Oxidoreductase, GFO/IDH/MOCA family; reductive methylation, structural genomics, PSI 2, protein structure initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A Probab=96.57 E-value=0.04 Score=33.66 Aligned_cols=178 Identities=15% Similarity=0.141 Sum_probs=90.6 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +=|.|+ |.-+++ -+|+|-. .+ ++.|+|+.-.+. +..++|.+..... T Consensus 4 igiIG~-G~~~~~-~~~~l~~------~~--~~~lvav~d~~~------------------------~~~~~~a~~~~~~ 49 (325) T 2ho3_A 4 LGVIGT-GAISHH-FIEAAHT------SG--EYQLVAIYSRKL------------------------ETAATFASRYQNI 49 (325) T ss_dssp EEEECC-SHHHHH-HHHHHHH------TT--SEEEEEEECSSH------------------------HHHHHHGGGSSSC T ss_pred EEEECC-CHHHHH-HHHHHHH------CC--CEEEEEEECCCH------------------------HHHHHHHHHCCCC T ss_conf 999998-399999-9999986------88--908999988999------------------------9999999984998 Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) . -+++ ++.|. + .+ .=+.|.++||..=..++...-++| .-|.+|||++.+++.|++|.+...+. T Consensus 50 ~-~~~~---~e~l~---~-~~--iD~V~I~tp~~~H~~~~~~al~~g-----khV~~EKP~a~~~~e~~~l~~~a~~~-- 112 (325) T 2ho3_A 50 Q-LFDQ---LEVFF---K-SS--FDLVYIASPNSLHFAQAKAALSAG-----KHVILEKPAVSQPQEWFDLIQTAEKN-- 112 (325) T ss_dssp E-EESC---HHHHH---T-SS--CSEEEECSCGGGHHHHHHHHHHTT-----CEEEEESSCCSSHHHHHHHHHHHHHT-- T ss_pred C-CCCH---HHHHH---C-CC--CCEEEEECCCCHHHHHHHHHHHCC-----CCHHCCCCCCCCCCHHHHHHHHHHHC-- T ss_conf 3-5685---99971---8-99--989999589603159999998634-----51222798311110246777788761-- Q ss_pred HHHEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCC-------HHHHHHHH--HHHHHHHHHHHH Q ss_conf 688351242012568777788774775200252803330799999846770-------24555532--200178876558 Q gi|254780504|r 173 ESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGV-------EDRVDYYN--NTGALRDMIQNH 243 (492) Q Consensus 173 E~qiyRIDHYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gv-------egR~~yyD--~~GaiRDmvQNH 243 (492) .-.++=-=.+.--+.++-+--+=-.+.+-+ .+.+...-.... ..| .++. +-|++-||. -| T Consensus 113 ~~~~~v~~~~r~~p~~~~lk~~i~~g~ig~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gGG~l~D~g-~H 181 (325) T 2ho3_A 113 NCFIFEAARNYHEKAFTTIKNFLADXQVLG---------ADFNYAKYSSKMPDLLAGQTPN-VFSDRFAGGALMDLG-IY 181 (325) T ss_dssp TCCEEEECTTTTCHHHHHHHHHHTTSCEEE---------EEEEEECCCCC-------------------CCHHHHTT-HH T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCC---------EEEEEEEEECCCCCCCCCCCCC-HHHHHHCCCEEECCC-CH T ss_conf 765422200001299999999998404663---------3999997402334455553100-123564586450033-50 Q ss_pred HHHHHHHHH Q ss_conf 999999987 Q gi|254780504|r 244 LLQLLCLVA 252 (492) Q Consensus 244 llQlL~lvA 252 (492) .+.++..+. T Consensus 182 ~id~~~~l~ 190 (325) T 2ho3_A 182 PLYAAVRLF 190 (325) T ss_dssp HHHHHHHHH T ss_pred HHHHHHHHH T ss_conf 999999983 No 23 >3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center for structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis} Probab=96.39 E-value=0.037 Score=33.91 Aligned_cols=181 Identities=14% Similarity=0.102 Sum_probs=97.9 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) -+-|.| +|.-+++...|+|- ..+ ++.|+++.-. +.+.+ .. .. ..+.. T Consensus 9 rigiIG-~G~~~~~~h~~~~~------~~~--~~~lvav~d~--~~~~~--------~~-----~~---------~~~~~ 55 (352) T 3kux_A 9 KVGLLG-YGYASKTFHAPLIM------GTP--GLELAGVSSS--DASKV--------HA-----DW---------PAIPV 55 (352) T ss_dssp EEEEEC-CSHHHHHTHHHHHH------TST--TEEEEEEECS--CHHHH--------HT-----TC---------SSCCE T ss_pred EEEEEC-CCHHHHHHHHHHHH------CCC--CEEEEEEECC--CHHHH--------HH-----HC---------CCCCE T ss_conf 399995-87999999999984------499--8399999898--99999--------97-----46---------99976 Q ss_pred EECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC Q ss_conf 86467897789988887405767846998406956866677777772587644357760566789889999999998738 Q gi|254780504|r 92 INLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIF 171 (492) Q Consensus 92 ~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f 171 (492) ++ +|+.| ++..+ .-+.|.++||..=..++...-++| .-|.+|||++.|++.|++|-+...+.= T Consensus 56 ----~~---~~~~l---l~~~~--iD~V~i~tp~~~H~~~~~~al~~g-----khv~~EKP~a~~~~ea~~l~~~~~~~~ 118 (352) T 3kux_A 56 ----VS---DPQML---FNDPS--IDLIVIPTPNDTHFPLAQSALAAG-----KHVVVDKPFTVTLSQANALKEHADDAG 118 (352) T ss_dssp ----ES---CHHHH---HHCSS--CCEEEECSCTTTHHHHHHHHHHTT-----CEEEECSSCCSCHHHHHHHHHHHHHTT T ss_pred ----EC---CHHHH---HCCCC--CCEEEECCCHHHHHHHHHHHHHCC-----CCEECCCCCCCCCCCCHHHHHHHHHCC T ss_conf ----89---89999---56999--998998886888898899999859-----977226874222232124566787638 Q ss_pred CHHHEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCC-HHHHHHH--HHHHHHHHHHHHHHHHHH Q ss_conf 9688351242012568777788774775200252803330799999846770-2455553--220017887655899999 Q gi|254780504|r 172 KESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGV-EDRVDYY--NNTGALRDMIQNHLLQLL 248 (492) Q Consensus 172 ~E~qiyRIDHYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gv-egR~~yy--D~~GaiRDmvQNHllQlL 248 (492) . .+.=-=+|..-+.+|-+.-+.-++.+=+ |.+++....--.+- .+...++ ..-|++.|+. .|.+-++ T Consensus 119 ~--~~~v~~~~r~~p~~~~~k~~i~~g~iG~-------i~~~~~~~~~~~~~~~~~w~~~~~~gGG~l~d~~-~H~ld~~ 188 (352) T 3kux_A 119 L--LLSVFHNRRWDSDFLTLKTLLAEGSLGN-------VVYFESHFDRYRPEIRQRWREQAGAGGGIWYDLG-PHLLDQA 188 (352) T ss_dssp C--CEEECCGGGGCHHHHHHHHHHHHTTTCS-------EEEEEEEEECBCCSSCSSCSCC---CBCHHHHHH-HHHHHHH T ss_pred C--CCEEEEEECHHHHHHHHHHHHHCCCCCC-------EEEEEEEECCCCCCCCCCCCCCCCCCCCEEEHHH-HHHHHHH T ss_conf 6--3001110000036999999886588885-------5899865056686444443465246881643016-7799999 Q ss_pred HHHH Q ss_conf 9987 Q gi|254780504|r 249 CLVA 252 (492) Q Consensus 249 ~lvA 252 (492) ..+. T Consensus 189 ~~l~ 192 (352) T 3kux_A 189 LQLF 192 (352) T ss_dssp HHHH T ss_pred HHHC T ss_conf 9754 No 24 >3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A Probab=96.35 E-value=0.051 Score=32.87 Aligned_cols=180 Identities=15% Similarity=0.135 Sum_probs=94.3 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -.+-|.| +|.-+++...|++ ... + .+.|+++.-+. .+.+. +++ .. .. T Consensus 6 ikigiIG-~G~~~~~~~~~~~------~~~-~-~~~l~~v~~~~--~~~~~-------~~~-~~--------------~~ 52 (358) T 3gdo_A 6 IKVGILG-YGLSGSVFHGPLL------DVL-D-EYQISKIMTSR--TEEVK-------RDF-PD--------------AE 52 (358) T ss_dssp EEEEEEC-CSHHHHHTTHHHH------TTC-T-TEEEEEEECSC--HHHHH-------HHC-TT--------------SE T ss_pred CEEEEEE-CCHHHHHHHHHHH------HCC-C-CCEEEEEECCC--HHHHH-------HHC-CC--------------CC T ss_conf 6799990-9699999999998------238-9-90899994889--99999-------867-99--------------83 Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 78646789778998888740576784699840695686667777777258764435776056678988999999999873 Q gi|254780504|r 91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492) Q Consensus 91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492) . |..+.++++..+ .=+.+.++||..=..++...-++| .=|.+|||++.+++.|++|.+...+. T Consensus 53 ~----------~~s~~ell~~~~--~DaV~i~tp~~~H~~~~~~al~~g-----k~V~~EKPla~~~~ea~~l~~~a~~~ 115 (358) T 3gdo_A 53 V----------VHELEEITNDPA--IELVIVTTPSGLHYEHTMACIQAG-----KHVVMEKPMTATAEEGETLKRAADEK 115 (358) T ss_dssp E----------ESSTHHHHTCTT--CCEEEECSCTTTHHHHHHHHHHTT-----CEEEEESSCCSSHHHHHHHHHHHHHH T ss_pred E----------ECCHHHHHCCCC--CCEEEECCCHHHHHHHHHHHHHCC-----CEEEEECEEHHHHHHHHHHHHHHHHC T ss_conf 5----------399999965999--999998897688999999998659-----98986120001036789999987624 Q ss_pred CCHHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCC-CHHHHHHH--HHHHHHHHHHHHHHHH Q ss_conf 89688351242-01256877778877477520025280333079999984677-02455553--2200178876558999 Q gi|254780504|r 171 FKESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIG-VEDRVDYY--NNTGALRDMIQNHLLQ 246 (492) Q Consensus 171 f~E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~g-vegR~~yy--D~~GaiRDmvQNHllQ 246 (492) = -.+.+-| +.--+.+|-+--+--.+.+-+ |.++.+....... ......+. ...|++.|+.- |.+. T Consensus 116 ~---~~~~v~~~~r~~p~~~~~k~~i~~G~lG~-------i~~~~~~~~~~~~~~~~~~~~~~~~~gG~l~~~g~-H~~d 184 (358) T 3gdo_A 116 G---VLLSVYHNRRWDNDFLTIKKLISEGSLED-------INTYQVSYNRYRPEVQARWREKEGTATGTLYDLGS-HIID 184 (358) T ss_dssp T---CCEEEECGGGGSHHHHHHHHHHHTTSSCS-------CCEEEEECCCBCCCC----------CCSHHHHTHH-HHHH T ss_pred C---EEEEEEECCCCCCCCCCHHHHHCCCCCCC-------CCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCH-HHHH T ss_conf 5---15654100013664320233430477676-------32000012235774322223444468863530536-7999 Q ss_pred HHHHH Q ss_conf 99998 Q gi|254780504|r 247 LLCLV 251 (492) Q Consensus 247 lL~lv 251 (492) ++..+ T Consensus 185 ~~~~l 189 (358) T 3gdo_A 185 QTLHL 189 (358) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 99997 No 25 >3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV} Probab=96.27 E-value=0.016 Score=36.53 Aligned_cols=85 Identities=14% Similarity=0.144 Sum_probs=54.1 Q ss_pred CCHHHHHHHHHHCCEEE-CCCCCHHHHHHH-HHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCC Q ss_conf 99899998985165786-467897789988-8874057678469984069568666777777725876443577605667 Q gi|254780504|r 77 YNPLKVQKFLSLIFYIN-LDVEKNYGWELL-GKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIG 154 (492) Q Consensus 77 ~~~~~~~~F~~~~~Y~~-~d~~~~~~y~~L-~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG 154 (492) .+++..+++.+.+..-. -.|++ |..+ .... ...+..-+.+.++||.+=..++...-++| .-|++|||++ T Consensus 49 ~~~~~a~~~a~~~gi~~~~~y~d---~~~~l~~e~-~~~~~iD~V~I~tp~~~H~~~~~~al~aG-----khVl~EKPla 119 (398) T 3dty_A 49 IDPIRGSAFGEQLGVDSERCYAD---YLSMFEQEA-RRADGIQAVSIATPNGTHYSITKAALEAG-----LHVVCEKPLC 119 (398) T ss_dssp SSHHHHHHHHHHTTCCGGGBCSS---HHHHHHHHT-TCTTCCSEEEEESCGGGHHHHHHHHHHTT-----CEEEECSCSC T ss_pred CCHHHHHHHHHHHCCCCCCCCCC---HHHHHHHHH-HCCCCEEEEEECCCHHHHHHHHHHHHHCC-----CCEEECCCCH T ss_conf 99999999999868895400499---999999875-17998179998998699899999999869-----9389857840 Q ss_pred CCHHHHHHHHHHHHHH Q ss_conf 8988999999999873 Q gi|254780504|r 155 SNLSSAQEIHAITRKI 170 (492) Q Consensus 155 ~Dl~SA~eLn~~l~~~ 170 (492) .|++.|++|-+...+. T Consensus 120 ~~~~ea~~l~~~a~~~ 135 (398) T 3dty_A 120 FTVEQAENLRELSHKH 135 (398) T ss_dssp SCHHHHHHHHHHHHHT T ss_pred HHHHHHHHHHHHHHHC T ss_conf 1678899999988633 No 26 >3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium LT2} Probab=95.99 E-value=0.1 Score=30.79 Aligned_cols=122 Identities=15% Similarity=0.060 Sum_probs=66.4 Q ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEEC-CCHHHHHHHHHHHHHH Q ss_conf 699840695686667777777258764435776056678988999999999873896883512-4201256877778877 Q gi|254780504|r 117 RVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRI-DHYLGKEAVQGLMVFR 195 (492) Q Consensus 117 rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~E~qiyRI-DHYLGKe~vqnil~lR 195 (492) -+.+.++||..=..++...-++| .-|.+|||++.|++.+++|-+...+.-. .+.-+ =++.--+.+|-+-.+- T Consensus 89 DaV~I~Tp~~~H~~~~~~al~~G-----khVl~EKPla~~~~e~~~l~~~~~~~~~--~~~~v~~~~R~~p~~~~~k~~i 161 (357) T 3ec7_A 89 EVVIITASNEAHADVAVAALNAN-----KYVFCEKPLAVTAADCQRVIEAEQKNGK--RMVQIGFMRRYDKGYVQLKNII 161 (357) T ss_dssp CEEEECSCGGGHHHHHHHHHHTT-----CEEEEESSSCSSHHHHHHHHHHHHHHTS--CCEEEECGGGGSHHHHHHHHHH T ss_pred CEEEECCCCCCCHHHHHHHHHCC-----CEEEECCCCHHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCHHHHHHHHHH T ss_conf 88998898500004578898517-----7699758813558999998765302566--4323332212688999999987 Q ss_pred HCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 47752002528033307999998467702455553220017887655899999998718544 Q gi|254780504|r 196 FANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLCLVAMEMPP 257 (492) Q Consensus 196 FaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHllQlL~lvAMe~P~ 257 (492) -++.+- .+-+|..... .-. ....+...|++.|+ --|.+-++..+.-.+|. T Consensus 162 ~~g~~G-------~~~~i~~~~~---~~~-~~~~~~~gg~l~d~-g~H~iD~~~~l~G~~~~ 211 (357) T 3ec7_A 162 DSGEIG-------QPLMVHGRHY---NAS-TVPEYKTPQAIYET-LIHEIDVMHWLLNEDYK 211 (357) T ss_dssp HHTTTC-------SEEEEEEEEE---CSC-CCTTCCTTHHHHTT-HHHHHHHHHHHHTCCEE T ss_pred HHHCCC-------CCCCCCCCCC---CCC-CCCHHCCCCCCCCC-CHHHHHHHHHHHCCCCE T ss_conf 631268-------6310010014---556-77401035664341-01399999998299975 No 27 >3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A* Probab=95.72 E-value=0.056 Score=32.61 Aligned_cols=183 Identities=13% Similarity=0.062 Sum_probs=94.9 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +-|.|++|--+++- ++||-+ ++ ...+..+.+.+... . .+... .. T Consensus 6 ~~iIG~~G~i~~~h-~~al~~------~~--~~~v~~~d~~~~~~--~----~~~~~-----------------~~---- 49 (312) T 3o9z_A 6 FALTGLAGYIAPRH-LKAIKE------VG--GVLVASLDPATNVG--L----VDSFF-----------------PE---- 49 (312) T ss_dssp EEEECTTSSSHHHH-HHHHHH------TT--CEEEEEECSSCCCG--G----GGGTC-----------------TT---- T ss_pred EEEECCCCHHHHHH-HHHHHH------CC--CCEEEEECCHHHHH--H----HHHCH-----------------HH---- T ss_conf 99998898999999-999970------89--95899986703566--7----55158-----------------88---- Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) .-.+.....|....+.+.......=+++.|+||..=..++...-++|. -|.+|||++.+++.|++|-+...+.=. T Consensus 50 a~~~~~~~~~~~~~~~~~~~~~~iD~V~I~tp~~~H~~~~~~al~~gk-----~Vl~EKP~a~~~~e~~~l~~~~~~~~~ 124 (312) T 3o9z_A 50 AEFFTEPEAFEAYLEDLRDRGEGVDYLSIASPNHLHYPQIRMALRLGA-----NALSEKPLVLWPEEIARLKELEARTGR 124 (312) T ss_dssp CEEESCHHHHHHHHHHHHHTTCCCSEEEECSCGGGHHHHHHHHHHTTC-----EEEECSSSCSCHHHHHHHHHHHHHHCC T ss_pred HHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCC-----CEEEECCCCCCHHHHHHHHHHHHHCCC T ss_conf 987144235141889875027996599998995789999999997199-----489804875877787789999886398 Q ss_pred HHHEEECCCHHHHHHHHHHHHHHHCCC---CCHHHHCCCCEEEEEEEEEECCCCH-HHHHHHH---HHHHHHHHHHHHHH Q ss_conf 688351242012568777788774775---2002528033307999998467702-4555532---20017887655899 Q gi|254780504|r 173 ESQIFRIDHYLGKEAVQGLMVFRFANT---FYESLWNNKYIDHVQITTAETIGVE-DRVDYYN---NTGALRDMIQNHLL 245 (492) Q Consensus 173 E~qiyRIDHYLGKe~vqnil~lRFaN~---~~e~~WNr~~I~~VqIt~~E~~gve-gR~~yyD---~~GaiRDmvQNHll 245 (492) .+- --+..||... +-+-+.+.....-+.++......-- ++.-++| .-|++-|+. -|.+ T Consensus 125 ---~~~-----------v~~~~R~~p~~~~~k~~i~~~~~g~~~~~~~~~~~~~~~~~~w~~~~~~~gG~l~d~~-~H~i 189 (312) T 3o9z_A 125 ---RVY-----------TVLQLRVHPSLLALKERLGQEKGAKDVVLTYVTGRGKWYGKSWKVDEAKSGGLATNIG-IHFF 189 (312) T ss_dssp ---CEE-----------ECCGGGGCHHHHHHHHHHHTCCSCEEEEEEEEECCCTTGGGSGGGCHHHHCCHHHHTT-HHHH T ss_pred ---CEE-----------EEEEEECCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEHHHH-HHHH T ss_conf ---236-----------3001006999999999997088760599876404676542000257113787222147-8999 Q ss_pred HHHHHH Q ss_conf 999998 Q gi|254780504|r 246 QLLCLV 251 (492) Q Consensus 246 QlL~lv 251 (492) -++..+ T Consensus 190 d~~~~l 195 (312) T 3o9z_A 190 DLLAWL 195 (312) T ss_dssp HHHHHH T ss_pred HHHHHH T ss_conf 999998 No 28 >1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A* Probab=95.69 E-value=0.13 Score=29.97 Aligned_cols=275 Identities=12% Similarity=0.096 Sum_probs=126.7 Q ss_pred HHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEECCCHH- Q ss_conf 8887405767846998406956866677777772587644357760566789889999999998738968835124201- Q gi|254780504|r 105 LGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHYL- 183 (492) Q Consensus 105 L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~E~qiyRIDHYL- 183 (492) +.++++..+ .=+.|.++||..=..++...-++| .-|.+|||++.|++.|++|.+...+. ...+.+-|-. T Consensus 142 ~~~ll~~~~--iD~V~i~tp~~~H~~~~~~al~aG-----khv~~EKP~a~~~~e~~~l~~~a~~~---~~~~~v~~~~r 211 (433) T 1h6d_A 142 FDKIAKDPK--IDAVYIILPNSLHAEFAIRAFKAG-----KHVMCEKPMATSVADCQRMIDAAKAA---NKKLMIGYRCH 211 (433) T ss_dssp GGGGGGCTT--CCEEEECSCGGGHHHHHHHHHHTT-----CEEEECSSCCSSHHHHHHHHHHHHHH---TCCEEECCGGG T ss_pred HHHHHCCCC--CCEEEEECCHHHHHHHHHHHHHCC-----CEEEEECCCCCCCCCCCHHHHHHHHH---CCCEEECCCCC T ss_conf 999956999--878999098799999999999879-----91999578412333232024667652---40115312123 Q ss_pred HHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHCCCCC Q ss_conf 25687777887747752002528033307999998467702---4555532---20017887655899999998718544 Q gi|254780504|r 184 GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVE---DRVDYYN---NTGALRDMIQNHLLQLLCLVAMEMPP 257 (492) Q Consensus 184 GKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gve---gR~~yyD---~~GaiRDmvQNHllQlL~lvAMe~P~ 257 (492) --+.++-+.-+=-.+.+= -|..|+........-. ....++. .-|++-|+.- |.+-++..+.=+.|. T Consensus 212 ~~~~~~~~k~~i~~g~iG-------~i~~v~~~~~~~~~~~~~~~~~~~~~~~~gGG~l~d~g~-H~iD~l~~l~G~~p~ 283 (433) T 1h6d_A 212 YDPMNRAAVKLIRENQLG-------KLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGI-YGLNGTRYLLGEEPI 283 (433) T ss_dssp GCHHHHHHHHHHHTTSSC-------SEEEEEEEEECCCCTTSHHHHGGGCHHHHSSSHHHHTHH-HHHHHHHHHHTSCEE T ss_pred CCCCCCCCCCCCCCCCCC-------CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHCCCCE T ss_conf 476322332111357777-------325898630344335666532234643567760035523-099999998499956 Q ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEE Q ss_conf 58858999999999973068881122361365213667768734334101479886648743899999708586785777 Q gi|254780504|r 258 SVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLEEIPLGISDTETFVAIKANIDNPRWSGIPFY 337 (492) Q Consensus 258 ~~~~~~ir~eK~kvlk~~r~~~~~~v~~~~v~GQY~~~~~~~~~v~gY~~e~~v~~S~TeTfaa~~l~idn~RW~gVPF~ 337 (492) + |.++-.. .-.......+++.+.+.+...| |+... T Consensus 284 ~-----------------------------V~a~~~~------------~~~~~~~~~~eD~~~~~l~f~n----G~~~~ 318 (433) T 1h6d_A 284 E-----------------------------VRAYTYS------------DPNDERFVEVEDRIIWQMRFRS----GALSH 318 (433) T ss_dssp E-----------------------------EEEEEEC------------CTTCGGGSSSCSEEEEEEEETT----SCEEE T ss_pred E-----------------------------EEEEEEE------------CCCCCCCCCCCCCCCCCEECCC----CCEEE T ss_conf 9-----------------------------9999851------------4676556433543310000489----61899 Q ss_pred EEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEE-EEEEECCCCCCCCEEEEEEEEEEECCCCCC Q ss_conf 5513346885179999985488643766654789856999971796504-443312688877445466665530223456 Q gi|254780504|r 338 LRTGKYLAKHISEIVIALKPAPCTIFDHQMSKIETNKLILRLQNNGEIE-QFITTKDHSTSNMKLKTTALRICCCSKRIK 416 (492) Q Consensus 338 lrtGK~l~~k~~eI~i~FK~~p~~~f~~~~~~~~~N~Lvi~iqP~~~i~-l~~~~K~pg~~~~~~~~~~l~~~~~~~~~~ 416 (492) +.+.-.-. ...++.|..-+ ..++ +.+..... -......++. ... ........ T Consensus 319 ~~~s~~~~-~~~~~~I~Gtk---------------G~i~--~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~ 371 (433) T 1h6d_A 319 GASSYSTT-TTSRFSVQGDK---------------AVLL--MDPATGYYQNLISVQTPGH----ANQ-----SMMPQFIM 371 (433) T ss_dssp EEEESSSC-CEEEEEEEESS---------------CEEE--ESSSSCSSCCCEEEEETTE----EEE-----ECCCSSCC T ss_pred EEECCCCC-CCCEEEEECCC---------------EEEE--EECCCCCCCCEEEEECCCC----CCC-----CCCCCCCC T ss_conf 86201235-67615998152---------------6999--9578774232278833787----765-----44765556 Q ss_pred CCCCHHHHH---HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC Q ss_conf 898624899---99998798335869899998458846999988734898745798 Q gi|254780504|r 417 RTPDGYERL---LMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAA 469 (492) Q Consensus 417 ~~pdaYe~L---l~D~i~Gd~tlF~r~dEve~sWrivdpiL~~~~~~~~~~~~Y~~ 469 (492) ...++|... +.+++.++...-...++-..+=++++-+.+.++..+..-..|.+ T Consensus 372 ~~~~~~~~e~~~F~~aI~~~~~~~~s~eda~~~~~iieAi~~Sa~tGk~V~id~~~ 427 (433) T 1h6d_A 372 PANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGY 427 (433) T ss_dssp SSCCHHHHHHHHHHHHHHTTCCCSSBHHHHHHHHHHHHHHHHHHHHSSCEECCSCC T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC T ss_conf 75439999999999999679989899999999999999999999739869989898 No 29 >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum atcc 13032} Probab=95.58 E-value=0.14 Score=29.67 Aligned_cols=181 Identities=12% Similarity=0.136 Sum_probs=99.1 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) .+-|.| +|.-++ .-+|+|- ..+ ++.|+|+.= .+. +..++|.+...- T Consensus 6 rvgiIG-~G~~g~-~h~~~~~------~~~--~~~l~av~d--~~~----------------------~~~~~~~~~~~~ 51 (344) T 3euw_A 6 RIALFG-AGRIGH-VHAANIA------ANP--DLELVVIAD--PFI----------------------EGAQRLAEANGA 51 (344) T ss_dssp EEEEEC-CSHHHH-HHHHHHH------HCT--TEEEEEEEC--SSH----------------------HHHHHHHHTTTC T ss_pred EEEEEC-CHHHHH-HHHHHHH------HCC--CCEEEEEEC--CCH----------------------HHHHHHHHHHCC T ss_conf 798999-729999-9999997------189--948999988--999----------------------999999998499 Q ss_pred EECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC Q ss_conf 86467897789988887405767846998406956866677777772587644357760566789889999999998738 Q gi|254780504|r 92 INLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIF 171 (492) Q Consensus 92 ~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f 171 (492) . .|++ +.++++..+ .-+++.++||..=..++...-++| .-|.+|||+..|++.|++|.+...+. T Consensus 52 -~-~~~~------~~ell~~~~--iD~V~I~tp~~~h~~~~~~al~~g-----k~Vl~EKP~a~~~~e~~~l~~~~~~~- 115 (344) T 3euw_A 52 -E-AVAS------PDEVFARDD--IDGIVIGSPTSTHVDLITRAVERG-----IPALCEKPIDLDIEMVRACKEKIGDG- 115 (344) T ss_dssp -E-EESS------HHHHTTCSC--CCEEEECSCGGGHHHHHHHHHHTT-----CCEEECSCSCSCHHHHHHHHHHHGGG- T ss_pred -C-EECC------HHHHHCCCC--CCEEEECCCCCCHHHHHHHHHHHC-----CCEEECCCCCHHHHHHHHHHHHHHHC- T ss_conf -7-7899------999964899--888997154311035679988513-----75110232200134566666655413- Q ss_pred CHHHEEECCCH-HHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHH-HHHHHHHHHHHHHHHHHHH Q ss_conf 96883512420-125687777887747752002528033307999998467702455553-2200178876558999999 Q gi|254780504|r 172 KESQIFRIDHY-LGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYY-NNTGALRDMIQNHLLQLLC 249 (492) Q Consensus 172 ~E~qiyRIDHY-LGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yy-D~~GaiRDmvQNHllQlL~ 249 (492) .-+..+.|- .--+.+|-+-.+--.+.+-+ |.++.+...... - .+..|. +.-|++.|+. -|.+-++. T Consensus 116 --~~~~~v~~~~R~~~~~~~~k~~i~~g~iG~-------i~~~~~~~~~~~-~-~~~~~~~~~gg~l~d~g-~H~iD~~~ 183 (344) T 3euw_A 116 --ASKVMLGFNRRFDPSFAAINARVANQEIGN-------LEQLVIISRDPA-P-APKDYIAGSGGIFRDMT-IHDLDMAR 183 (344) T ss_dssp --GGGEEECCGGGGCHHHHHHHHHHHTTTTSS-------EEEEEEEEECSS-C-CCHHHHHHSCHHHHHTH-HHHHHHHH T ss_pred --CCCCCCCCCCCCCHHHHHHHHHHHCCCCCC-------EEEEEEEECCCC-C-CCCCCCCCCCCEEEEEE-EEEHHHHH T ss_conf --332212431226878999999875388550-------589999952798-8-76654256897645217-62003248 Q ss_pred HHHCC Q ss_conf 98718 Q gi|254780504|r 250 LVAME 254 (492) Q Consensus 250 lvAMe 254 (492) .+.=+ T Consensus 184 ~l~g~ 188 (344) T 3euw_A 184 FFVPN 188 (344) T ss_dssp HHCSC T ss_pred HHCCC T ss_conf 76099 No 30 >3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum} Probab=95.23 E-value=0.18 Score=28.89 Aligned_cols=319 Identities=13% Similarity=0.135 Sum_probs=150.8 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -.+-|.|+ |..+.+-.+|+|- .++ ++.|+|+.-. +.+ ..+++.+... T Consensus 6 irigiiG~-G~~~~~~h~~~l~------~~~--~~~lvav~d~--~~~----------------------~~~~~a~~~~ 52 (359) T 3m2t_A 6 IKVGLVGI-GAQMQENLLPSLL------QMQ--DIRIVAACDS--DLE----------------------RARRVHRFIS 52 (359) T ss_dssp EEEEEECC-SHHHHHTHHHHHH------TCT--TEEEEEEECS--SHH----------------------HHGGGGGTSC T ss_pred CEEEEECC-HHHHHHHHHHHHH------HCC--CCEEEEEECC--CHH----------------------HHHHHHHHCC T ss_conf 28999917-1999999999998------399--9589999889--999----------------------9999998849 Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 78646789778998888740576784699840695686667777777258764435776056678988999999999873 Q gi|254780504|r 91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492) Q Consensus 91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492) -. .-++ +|+. +++..+. -+.+.|+||..=..++...-++| .-|.+|||++.|++.|++|-+...+. T Consensus 53 ~~-~~~~---~~~~---ll~~~~i--D~V~I~tp~~~H~~~~~~al~~G-----k~V~~EKP~a~~~~ea~~l~~~a~~~ 118 (359) T 3m2t_A 53 DI-PVLD---NVPA---MLNQVPL--DAVVMAGPPQLHFEMGLLAMSKG-----VNVFVEKPPCATLEELETLIDAARRS 118 (359) T ss_dssp SC-CEES---SHHH---HHHHSCC--SEEEECSCHHHHHHHHHHHHHTT-----CEEEECSCSCSSHHHHHHHHHHHHHH T ss_pred CC-CEEC---CHHH---HHCCCCC--CEEEECCCHHHHHHHHHHHHHCC-----CEEEEEECCCHHHHHHHHHHHHHHHC T ss_conf 98-5318---9999---9659999--98998786354358999998439-----80999853303179999988665411 Q ss_pred CCHHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHH-HHHHHHHHHHHHHHHHHHH Q ss_conf 89688351242-012568777788774775200252803330799999846770245555-3220017887655899999 Q gi|254780504|r 171 FKESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDY-YNNTGALRDMIQNHLLQLL 248 (492) Q Consensus 171 f~E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~y-yD~~GaiRDmvQNHllQlL 248 (492) ..++-+-| +.--+.++-+-.+=-.+.+ --|-+|.+...-.........+ =+..|++-|+. -|.+-++ T Consensus 119 ---~~~~~v~~~~R~~p~~~~~k~~i~~g~i-------G~i~~i~~~~~~~~~~~~~w~~~~~~gg~l~d~~-~H~iDl~ 187 (359) T 3m2t_A 119 ---DVVSGVGMNFKFARPVRQLREMTQVDEF-------GETLHIQLNHYANKPRAPLWGLDSTLRSFLLAQA-IHTIDLA 187 (359) T ss_dssp ---TCCEEECCHHHHCHHHHHHHHHHTSGGG-------CCEEEEEEEEECCCCSSCCTTCSCHHHHHHHHTH-HHHHHHH T ss_pred ---CCCCCCCCCEEHHHHHHHHHHHHHHHHC-------CCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHH T ss_conf ---3343342000003578999999986105-------8549999920457764222343322221134532-1289999 Q ss_pred HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECC Q ss_conf 99871854458858999999999973068881122361365213667768734334101479886648743899999708 Q gi|254780504|r 249 CLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLEEIPLGISDTETFVAIKANIDN 328 (492) Q Consensus 249 ~lvAMe~P~~~~~~~ir~eK~kvlk~~r~~~~~~v~~~~v~GQY~~~~~~~~~v~gY~~e~~v~~S~TeTfaa~~l~idn 328 (492) ..+.=.+|.+ |.++-.. +..+.++.+.+..+| T Consensus 188 ~~l~~~~~~~-----------------------------V~a~~~~-------------------~~~~~~~~~~l~f~n 219 (359) T 3m2t_A 188 ITFGDGELRR-----------------------------VQSSVQR-------------------HDDALIVRADMAFSS 219 (359) T ss_dssp HHHHCSCEEE-----------------------------EEEEEEE-------------------ETTEEEEEEEEEETT T ss_pred HHHHCCCCEE-----------------------------EEEEEEE-------------------CCCCCEEEEEEECCC T ss_conf 9983899369-----------------------------9999874-------------------488706899997389 Q ss_pred CCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEEE Q ss_conf 58678577755133468851799999854886437666547898569999717965044433126888774454666655 Q gi|254780504|r 329 PRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTIFDHQMSKIETNKLILRLQNNGEIEQFITTKDHSTSNMKLKTTALRI 408 (492) Q Consensus 329 ~RW~gVPF~lrtGK~l~~k~~eI~i~FK~~p~~~f~~~~~~~~~N~Lvi~iqP~~~i~l~~~~K~pg~~~~~~~~~~l~~ 408 (492) |+.-.+.++-..+....++.|..-+- .+.... ..+.+.+. .+...... .+. .... .... T Consensus 220 ----G~~~~l~~s~~~~~~~~~~~i~g~~g--~~i~~~----~~~~~~~~-~~~~~~~~------~~~-~~~~---~~~~ 278 (359) T 3m2t_A 220 ----GATASLLAGTSFPYFEFDMKLVSSSS--TLVELD----NLWNITLH-EPEHATRP------TGA-AKRW---RGAW 278 (359) T ss_dssp ----SCEEEEEEESCSSSCEEEEEEEETTS--CEEEEE----TTTEEEEE-CTTCCBTT------TBS-CTTC---CEEE T ss_pred ----CCEEEEEEECCCCCCCCEEEEEECCC--EEEEEC----CCCCEEEE-CCCCCCCC------CCC-CCCC---CCCC T ss_conf ----95899998648889886799996698--899934----87633673-36754333------675-3212---4566 Q ss_pred EECCCCCCCCCCHHHH---HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH Q ss_conf 3022345689862489---99999879833586989999845884699998 Q gi|254780504|r 409 CCCSKRIKRTPDGYER---LLMDIIHANQTLFMGYDEVEETWKWSDSILKS 456 (492) Q Consensus 409 ~~~~~~~~~~pdaYe~---Ll~D~i~Gd~tlF~r~dEve~sWrivdpiL~~ 456 (492) ...........++|.. =+.+++++++..-+..++...+=++++.|.++ T Consensus 279 ~~~~~~~~~~~~~~~~~~~~F~~aI~~~~~~~~~~~dal~~~~iieai~~a 329 (359) T 3m2t_A 279 QPGPLDSGYERSGYHGELHQFFQAIREHRRFEADFASLLPTYRVIEEICSA 329 (359) T ss_dssp CCCTTCCBSTTTSHHHHHHHHHHHHHTTCCCTTSTGGGHHHHHHHHHHHHH T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHC T ss_conf 776655554551899999999999977998989999999999999999821 No 31 >3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima} Probab=95.18 E-value=0.037 Score=33.86 Aligned_cols=125 Identities=16% Similarity=0.208 Sum_probs=69.5 Q ss_pred EEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEECCCH-HHHHHHHHHHHHHH Q ss_conf 99840695686667777777258764435776056678988999999999873896883512420-12568777788774 Q gi|254780504|r 118 VFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHY-LGKEAVQGLMVFRF 196 (492) Q Consensus 118 ifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~E~qiyRIDHY-LGKe~vqnil~lRF 196 (492) +.+.++||..-..++...-++| .-|.+|||++.|++.|++|.+...+. .-.-++-+.|= .--+.++.+.-+-- T Consensus 70 ~V~i~tp~~~H~~~~~~al~~g-----k~Vl~EKP~a~~~~ea~~l~~~~~~~-~~~v~~~v~~~~r~~p~~~~~~~~i~ 143 (337) T 3ip3_A 70 ILVINTVFSLNGKILLEALERK-----IHAFVEKPIATTFEDLEKIRSVYQKV-RNEVFFTAMFGIRYRPHFLTAKKLVS 143 (337) T ss_dssp EEEECSSHHHHHHHHHHHHHTT-----CEEEECSSSCSSHHHHHHHHHHHHHH-TTTCCEEECCGGGGSHHHHHHHHHHH T ss_pred EEEEECCCHHHHHHHHHHHHCC-----CEEEEECCCCCCCHHHHHHHHHHHCC-CCCCCEECCEEEECCCHHHHHHHHCC T ss_conf 8999588616799999999879-----96999478544401222345543200-24322111245541612333444211 Q ss_pred CCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHCCCCCC Q ss_conf 77520025280333079999984677024555532----200178876558999999987185445 Q gi|254780504|r 197 ANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYN----NTGALRDMIQNHLLQLLCLVAMEMPPS 258 (492) Q Consensus 197 aN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD----~~GaiRDmvQNHllQlL~lvAMe~P~~ 258 (492) ++.+=+ |-+++....-..+ .+..|+. ..|++.|+. -|.+-++..+.=++|.+ T Consensus 144 ~g~iG~-------i~~i~~~~~~~~~--~~~~~~~~~~~~gG~l~d~g-~H~id~~~~l~G~~~~~ 199 (337) T 3ip3_A 144 EGAVGE-------IRLVNTQKSYKLG--QRPDFYKKRETYGGTIPWVG-IHAIDWIHWITGKKFLS 199 (337) T ss_dssp HTTTSS-------EEEEEEEEEBCCC--SCCGGGGSHHHHCCHHHHTT-HHHHHHHHHHHCCCEEE T ss_pred CCCCCE-------EEEEEEEECCCCC--CCCCEEEECCCCCCCCCCCC-CCHHHHHHHHCCCCCEE T ss_conf 100000-------1200577425677--54210000002587334546-54466679871998439 No 32 >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} Probab=94.42 E-value=0.29 Score=27.47 Aligned_cols=314 Identities=11% Similarity=0.055 Sum_probs=151.0 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) |=|+| +|.-+++-+.|++. .+ ++.|+|+.-+.. + ..++|.+..... T Consensus 3 ~GIIG-~G~~~~~~~~~~~~-------~~--~~~l~av~d~~~--~----------------------~~~~~~~~~~~~ 48 (332) T 2glx_A 3 WGLIG-ASTIAREWVIGAIR-------AT--GGEVVSMMSTSA--E----------------------RGAAYATENGIG 48 (332) T ss_dssp EEEES-CCHHHHHTHHHHHH-------HT--TCEEEEEECSCH--H----------------------HHHHHHHHTTCS T ss_pred EEEEC-CHHHHHHHHHHHHH-------CC--CCEEEEEECCCH--H----------------------HHHHHHHHHCCC T ss_conf 99999-66999999999973-------89--978999984999--9----------------------999999980999 Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) . -++ + +.++++..+. =+.|.|+||..=..++...-++| .-|.+|||++.+++.|++|-+...+. T Consensus 49 ~-~~~---~---~~e~l~~~~i--D~v~i~tp~~~H~~~~~~al~~g-----k~v~~EKP~~~~~~e~~~l~~~~~~~-- 112 (332) T 2glx_A 49 K-SVT---S---VEELVGDPDV--DAVYVSTTNELHREQTLAAIRAG-----KHVLCEKPLAMTLEDAREMVVAAREA-- 112 (332) T ss_dssp C-CBS---C---HHHHHTCTTC--CEEEECSCGGGHHHHHHHHHHTT-----CEEEECSSSCSSHHHHHHHHHHHHHH-- T ss_pred C-EEC---C---HHHHHCCCCC--CEEEECCCCHHHHHHHHHHHHCC-----CCEECCCCCHHHHHHHHHHHHHHHHH-- T ss_conf 4-018---9---9999569999--99999688446578899999869-----98753677303578999988766540-- Q ss_pred HHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHH--H--HHHHHHHHHHHHHHHH Q ss_conf 688351242-0125687777887747752002528033307999998467702455553--2--2001788765589999 Q gi|254780504|r 173 ESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYY--N--NTGALRDMIQNHLLQL 247 (492) Q Consensus 173 E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yy--D--~~GaiRDmvQNHllQl 247 (492) ...+.+-| +-=-+.+|-+.-+-=.|.+= .|-+|+....-...-.-+.-++ . ..|++.|+.- |.+-+ T Consensus 113 -~~~~~v~~~~r~~p~~~~~~~~i~~g~lG-------~i~~~~~~~~~~~~~~~~~w~~~~~~~~gG~l~d~~~-H~id~ 183 (332) T 2glx_A 113 -GVVLGTNHHLRNAAAHRAMRDAIAEGRIG-------RPIAARVFHAVYLPPHLQGWRLERPEAGGGVILDITV-HDADT 183 (332) T ss_dssp -TCCEEECCCGGGSHHHHHHHHHHHTTTTS-------SEEEEEEEEECBCCGGGTTGGGSCTTTTCSHHHHTHH-HHHHH T ss_pred -CCCCCCCCCCCCHHHHHHHHHHHHCCCCC-------CEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCH-HHHHH T ss_conf -23333331121038999999999758888-------4599999973457876544333630058977420103-49999 Q ss_pred HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEEC Q ss_conf 99987185445885899999999997306888112236136521366776873433410147988664874389999970 Q gi|254780504|r 248 LCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLEEIPLGISDTETFVAIKANID 327 (492) Q Consensus 248 L~lvAMe~P~~~~~~~ir~eK~kvlk~~r~~~~~~v~~~~v~GQY~~~~~~~~~v~gY~~e~~v~~S~TeTfaa~~l~id 327 (492) +..+.=+.|.+.. ++..+.. .. +...++++.+.+.-+ T Consensus 184 ~~~l~g~~~~~v~--------------------------a~~~~~~------------~~-----~~~~~d~~~~~~~~~ 220 (332) T 2glx_A 184 LRFVLNDDPAEAV--------------------------AISHSAG------------MG-----KEGVEDGVMGVLRFQ 220 (332) T ss_dssp HHHHHTSCEEEEE--------------------------EEEECCS------------SS-----CTTCCSEEEEEEEET T ss_pred HHHHHCCCCEEEE--------------------------EEECCCC------------CC-----CCCCCCCCEEEEEEC T ss_conf 9998199962899--------------------------9962433------------45-----567675104788856 Q ss_pred CCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEEEEE Q ss_conf 85867857775513346885179999985488643766654789856999971796504443312688877445466665 Q gi|254780504|r 328 NPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTIFDHQMSKIETNKLILRLQNNGEIEQFITTKDHSTSNMKLKTTALR 407 (492) Q Consensus 328 n~RW~gVPF~lrtGK~l~~k~~eI~i~FK~~p~~~f~~~~~~~~~N~Lvi~iqP~~~i~l~~~~K~pg~~~~~~~~~~l~ 407 (492) | |+-..+.++...+....++.|..-+ + .+++.-............+.+. . . T Consensus 221 ~----G~~~~~~~s~~~~~~~~~~~I~Gt~--G-------------~i~~~~~~~~~~~~~~~~~~~~---~---~---- 271 (332) T 2glx_A 221 S----GVIAQFHDAFTTKFAETGFEVHGTE--G-------------SLIGRNVMTQKPVGTVTLRNAE---G---E---- 271 (332) T ss_dssp T----SCEEEEEEESBCSSCCCEEEEEESS--C-------------EEEEESCSSSSSCCEEEEEETT---E---E---- T ss_pred C----CEEEEEEEEECCCCCCEEEEEEEEE--E-------------EEEECCCCCCCCCCEEEEECCC---C---E---- T ss_conf 9----8799999883258763479999700--3-------------9997266656766428985588---6---0---- Q ss_pred EEECCCCCCCCCCHHHHH---HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC Q ss_conf 530223456898624899---999987983358698999984588469999887348 Q gi|254780504|r 408 ICCCSKRIKRTPDGYERL---LMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIIN 461 (492) Q Consensus 408 ~~~~~~~~~~~pdaYe~L---l~D~i~Gd~tlF~r~dEve~sWrivdpiL~~~~~~~ 461 (492) ........++|... +.++++|+...=+..++-..+=++++.+.+..+..+ T Consensus 272 ----~~~~~~~~~~~~~~~~~f~~~I~~~~~~~~s~~~~~~~~~i~~a~~~S~~~g~ 324 (332) T 2glx_A 272 ----SQLPLDPANLYETALAAFHSAIEGHGQPSATGEDGVWSLATGLAVVKAAATGQ 324 (332) T ss_dssp ----EECCCCCCCHHHHHHHHHHHHHTTSSCCSSBHHHHHHHHHHHHHHHHHHHHSS T ss_pred ----EECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC T ss_conf ----66557823599999999999996799898999999999999999999997498 No 33 >2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A* Probab=94.10 E-value=0.15 Score=29.59 Aligned_cols=68 Identities=6% Similarity=0.015 Sum_probs=46.7 Q ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEECCCH-HHHHHHHHHH Q ss_conf 699840695686667777777258764435776056678988999999999873896883512420-1256877778 Q gi|254780504|r 117 RVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHY-LGKEAVQGLM 192 (492) Q Consensus 117 rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~E~qiyRIDHY-LGKe~vqnil 192 (492) -+.+.++|+..=..++...-++| .-|.+|||++.+++-+++|-+...+. ..++-+.|- .--+.++.+. T Consensus 93 D~V~I~tp~~~H~~~~~~al~~g-----~~v~~EKP~~~~~~e~~~l~~~~~~~---~~~~~v~~~~r~~~~~~~~~ 161 (444) T 2ixa_A 93 DAVFVSSPWEWHHEHGVAAMKAG-----KIVGMEVSGAITLEECWDYVKVSEQT---GVPLMALENVCYRRDVMAIL 161 (444) T ss_dssp CEEEECCCGGGHHHHHHHHHHTT-----CEEEECCCCCSSHHHHHHHHHHHHHH---CCCEEECCGGGGCHHHHHHH T ss_pred CEEEECCCCHHHHHHHHHHHHCC-----CEEEECCCCCCCHHHHHHHHHHHHHH---CCCCEECCCCCCCHHHHHHH T ss_conf 88998588276899999999719-----87774188989999999999999983---99960110444587999999 No 34 >3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum} Probab=93.93 E-value=0.073 Score=31.78 Aligned_cols=119 Identities=18% Similarity=0.142 Sum_probs=65.2 Q ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEECCC-HHHHHHHHHHHHHH Q ss_conf 69984069568666777777725876443577605667898899999999987389688351242-01256877778877 Q gi|254780504|r 117 RVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDH-YLGKEAVQGLMVFR 195 (492) Q Consensus 117 rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~E~qiyRIDH-YLGKe~vqnil~lR 195 (492) -+.+.|+||..=..++...-++| .-|.+|||++.+++.|++|.+...+. ..++.|.| |.--+.++-+.-+- T Consensus 85 DaV~i~tp~~~H~~~~~~al~aG-----khVl~EKPla~~~~e~~~l~~~a~~~---g~~~~vg~~~r~~p~~~~~k~li 156 (383) T 3oqb_A 85 TMFFDAATTQARPGLLTQAINAG-----KHVYCEKPIATNFEEALEVVKLANSK---GVKHGTVQDKLFLPGLKKIAFLR 156 (383) T ss_dssp CEEEECSCSSSSHHHHHHHHTTT-----CEEEECSCSCSSHHHHHHHHHHHHHT---TCCEEECCGGGGSHHHHHHHHHH T ss_pred CEEEECCCHHHHHHHHHHHHHCC-----CCEEECCCCCCHHHHHHHHHHHHHCC---CCEEEEEEEECCCCCCCCCCCCC T ss_conf 78998998699999999999869-----94780288633299998865466505---96699997431466434432112 Q ss_pred HCCCCCHHHHCCCCEEEEEEEEEECC----C-CH--HHHHHH--HHHHHHHHHHHHHHHHHHHHH Q ss_conf 47752002528033307999998467----7-02--455553--220017887655899999998 Q gi|254780504|r 196 FANTFYESLWNNKYIDHVQITTAETI----G-VE--DRVDYY--NNTGALRDMIQNHLLQLLCLV 251 (492) Q Consensus 196 FaN~~~e~~WNr~~I~~VqIt~~E~~----g-ve--gR~~yy--D~~GaiRDmvQNHllQlL~lv 251 (492) -++.+= -|-+|+..+.--. . -. ....+. ..-|++.|+. .|.+-++-.+ T Consensus 157 ~~G~lG-------~i~~i~~~~~~~~~~~~~~~~~~~~w~~~~~~gGG~l~d~g-~H~id~~~~l 213 (383) T 3oqb_A 157 DSGFFG-------RILSVRGEFGYWVFEGGWQEAQRPSWNYRDEDGGGIILDMV-CHWRYVLDNL 213 (383) T ss_dssp HTTTTS-------SEEEEEEEEECCCCCSSSSCCSSCGGGGCTTTTCCHHHHHH-HHHHHHHHHH T ss_pred CCCCCC-------CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC-CHHHHHHHHH T ss_conf 211038-------56999999602345555444556543212246785686233-0388999997 No 35 >3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} Probab=93.88 E-value=0.37 Score=26.73 Aligned_cols=184 Identities=13% Similarity=0.078 Sum_probs=97.0 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) .+-|+|+ |--++ ..+|+| ..++ ++.|+|++= .+.+. .++|.+.+.- T Consensus 4 rvgiIG~-G~~g~-~h~~~~------~~~~--~~~ivav~d--~~~~~----------------------~~~~a~~~~~ 49 (344) T 3ezy_A 4 RIGVIGL-GRIGT-IHAENL------KMID--DAILYAISD--VREDR----------------------LREMKEKLGV 49 (344) T ss_dssp EEEEECC-SHHHH-HHHHHG------GGST--TEEEEEEEC--SCHHH----------------------HHHHHHHHTC T ss_pred EEEEECC-HHHHH-HHHHHH------HHCC--CCEEEEEEC--CCHHH----------------------HHHHHHHCCC T ss_conf 4999997-19999-999999------7289--968999989--89999----------------------9999998399 Q ss_pred EECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHC Q ss_conf 86467897789988887405767846998406956866677777772587644357760566789889999999998738 Q gi|254780504|r 92 INLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIF 171 (492) Q Consensus 92 ~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f 171 (492) .. -++ + +.++++..+ .-+.+.++||..=..++...-++| .=|.+|||+..|++.|++|-+...+.= T Consensus 50 ~~-~~~---~---~~ell~~~~--iD~V~I~tp~~~H~~~~~~al~~g-----khV~~EKP~a~~~~e~~~l~~~a~~~~ 115 (344) T 3ezy_A 50 EK-AYK---D---PHELIEDPN--VDAVLVCSSTNTHSELVIACAKAK-----KHVFCEKPLSLNLADVDRMIEETKKAD 115 (344) T ss_dssp SE-EES---S---HHHHHHCTT--CCEEEECSCGGGHHHHHHHHHHTT-----CEEEEESCSCSCHHHHHHHHHHHHHHT T ss_pred CC-CCC---C---HHHHHCCCC--CCEEEECCCCHHHHHHHHHHHHCC-----CCEEEECCCCCCHHHHHHHHHHHHCCC T ss_conf 84-029---9---999964999--899997163114399999999769-----968994572111036777777764369 Q ss_pred CHHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH Q ss_conf 9688351242-012568777788774775200252803330799999846770245555322001788765589999999 Q gi|254780504|r 172 KESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLCL 250 (492) Q Consensus 172 ~E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD~~GaiRDmvQNHllQlL~l 250 (492) . .+.+.| +.--+.++-+--+=-.+.+- .|..+++.......-..+ -.-...|++-||. -|.+-++.. T Consensus 116 ~---~~~v~~~~r~~p~~~~~~~~i~~g~ig-------~i~~~~~~~~~~~~~~~~-~~~~~gg~l~d~g-~H~id~~~~ 183 (344) T 3ezy_A 116 V---ILFTGFNRRFDRNFKKLKEAVENGTIG-------KPHVLRITSRDPAPPPLD-YIRVSGGIFLDMT-IHDFDMARY 183 (344) T ss_dssp C---CEEEECGGGGCHHHHHHHHHHHTTTTS-------SEEEEEEEEECSSCCCHH-HHHTTTCHHHHTH-HHHHHHHHH T ss_pred C---EEEEEECCCCCHHHHHHHHHHHCCCCC-------CCEEEEEEEECCCCCCCC-CCCCCCCCEEEEE-ECHHHHHHH T ss_conf 7---699983433789999999999869988-------744899998036776455-2003799433413-449999976 Q ss_pred HHCCC Q ss_conf 87185 Q gi|254780504|r 251 VAMEM 255 (492) Q Consensus 251 vAMe~ 255 (492) +.=.+ T Consensus 184 ~~g~~ 188 (344) T 3ezy_A 184 IMGEE 188 (344) T ss_dssp HHSSC T ss_pred HHCCC T ss_conf 63257 No 36 >3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa} Probab=92.54 E-value=0.57 Score=25.34 Aligned_cols=124 Identities=11% Similarity=0.018 Sum_probs=69.4 Q ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEECCC-HHHHHHHHHHHHHH Q ss_conf 69984069568666777777725876443577605667898899999999987389688351242-01256877778877 Q gi|254780504|r 117 RVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDH-YLGKEAVQGLMVFR 195 (492) Q Consensus 117 rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~E~qiyRIDH-YLGKe~vqnil~lR 195 (492) =+.+.++||..=..++...-++| .-|.+|||++.|++.+++|-+...+. ...+.+-| +.--+.+|.+--+= T Consensus 75 D~V~I~tp~~~H~~~~~~al~~g-----k~v~~EKPla~~~~e~~~l~~~~~~~---~~~~~v~~~~R~~p~~~~~k~~i 146 (318) T 3oa2_A 75 DYVSICSPNYLHYPHIAAGLRLG-----CDVICEKPLVPTPEMLDQLAVIERET---DKRLYNILQLRHHQAIIALKDKV 146 (318) T ss_dssp CEEEECSCGGGHHHHHHHHHHTT-----CEEEECSSCCSCHHHHHHHHHHHHHH---TCCEEECCGGGGCHHHHHHHHHH T ss_pred CEEEECCCHHHHHHHHHHHHHCC-----CEEEEECCCCCCHHHHHHHHHHHHCC---CCEEEEEEEECCCHHHHHHHHHH T ss_conf 09998598499999999999759-----91999457734303667899876515---97069986303898999999998 Q ss_pred HCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHCCCC Q ss_conf 47752002528033307999998467702455553----22001788765589999999871854 Q gi|254780504|r 196 FANTFYESLWNNKYIDHVQITTAETIGVEDRVDYY----NNTGALRDMIQNHLLQLLCLVAMEMP 256 (492) Q Consensus 196 FaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yy----D~~GaiRDmvQNHllQlL~lvAMe~P 256 (492) -.+.+- .|-.+.++..-..+.....+++ ...|++.|+.- |.+-++..+.=++| T Consensus 147 ~~g~iG-------~i~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~d~~~-H~iD~~~~l~G~~~ 203 (318) T 3oa2_A 147 AREKSP-------HKYEVDLTYITSRGNWYLKSWKGDPRKSFGVATNIGV-HFYDMLHFIFGKLQ 203 (318) T ss_dssp HHS-CS-------SCEEEEEEEEECCCHHHHHSGGGCHHHHCCHHHHHHH-HHHHHHHHHHCSEE T ss_pred HCCCCC-------CEEEEEEEEECCCCCCCCCHHCCCCCCCCCHHHHHHH-HHHHHHHHHHCCCE T ss_conf 527788-------5599999751267765530001685357623140587-99999999759986 No 37 >1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A* Probab=91.75 E-value=0.55 Score=25.45 Aligned_cols=49 Identities=18% Similarity=0.304 Sum_probs=40.4 Q ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 699840695686667777777258764435776056678988999999999873 Q gi|254780504|r 117 RVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKI 170 (492) Q Consensus 117 rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~ 170 (492) -+.|.|+||..=...+...-++| .-|.+|||++.+++.+++|-+...+. T Consensus 67 DaV~I~tp~~~H~~~~~~al~~g-----khV~~EKPla~~~~e~~~l~~~a~~~ 115 (294) T 1lc0_A 67 DVAYICSESSSHEDYIRQFLQAG-----KHVLVEYPMTLSFAAAQELWELAAQK 115 (294) T ss_dssp EEEEECSCGGGHHHHHHHHHHTT-----CEEEEESCSCSCHHHHHHHHHHHHHT T ss_pred CEEEEECCCHHHHHHHHHHHHCC-----CCEEECCCCCCCHHHHHHHHHHHHHC T ss_conf 89999289566689999999759-----97342067638999999999999981 No 38 >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Probab=91.14 E-value=0.53 Score=25.58 Aligned_cols=61 Identities=15% Similarity=0.083 Sum_probs=39.6 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -.++||||||-+.+. |...|- . .++.+++++|+.-.. .. . ....+. T Consensus 4 kkIlV~GatG~iG~~-l~~~ll---~------~g~~V~~~~R~~~~~---------------~~-~--------~~~~~~ 49 (206) T 1hdo_A 4 KKIAIFGATGQTGLT-TLAQAV---Q------AGYEVTVLVRDSSRL---------------PS-E--------GPRPAH 49 (206) T ss_dssp CEEEEESTTSHHHHH-HHHHHH---H------TTCEEEEEESCGGGS---------------CS-S--------SCCCSE T ss_pred CEEEEECCCCHHHHH-HHHHHH---H------CCCEEEEEECCHHHC---------------CC-C--------CCCCCE T ss_conf 889999998689999-999999---7------869899998483656---------------54-3--------356615 Q ss_pred EEECCCCCHHHHHHH Q ss_conf 786467897789988 Q gi|254780504|r 91 YINLDVEKNYGWELL 105 (492) Q Consensus 91 Y~~~d~~~~~~y~~L 105 (492) ++.+|+.++++.... T Consensus 50 ~v~~D~~d~~~l~~a 64 (206) T 1hdo_A 50 VVVGDVLQAADVDKT 64 (206) T ss_dssp EEESCTTSHHHHHHH T ss_pred EEEECCCHHHHHHHH T ss_conf 896024336789999 No 39 >3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343} Probab=88.23 E-value=1.3 Score=22.75 Aligned_cols=184 Identities=13% Similarity=0.094 Sum_probs=100.5 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +=|.| .|.-+++.-+|+|-. . + ++.|+|+.-...+.. ++. + ..... T Consensus 8 vgiiG-~G~~g~~~h~~~~~~------~-~-~~~ivav~d~~~~~a----------~~~-----~---------~~~~~- 53 (362) T 3fhl_A 8 TGLAA-FGMSGQVFHAPFIST------N-P-HFELYKIVERSKELS----------KER-----Y---------PQASI- 53 (362) T ss_dssp EEESC-CSHHHHHTTHHHHHH------C-T-TEEEEEEECSSCCGG----------GTT-----C---------TTSEE- T ss_pred EEEEC-CCHHHHHHHHHHHHH------C-C-CCEEEEEECCCHHHH----------HHH-----C---------CCCCC- T ss_conf 99993-689999999999983------9-8-929999984999999----------976-----7---------89984- Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 64678977899888874057678469984069568666777777725876443577605667898899999999987389 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) +++ |+ ++++..+ .=+.+.++||..=..++...-++| .-|.+|||++.|++.|++|-+...+. T Consensus 54 ---~~~---~~---ell~~~~--iDaV~I~tp~~~H~~~~~~al~aG-----khV~~EKPla~~~~ea~~l~~~a~~~-- 115 (362) T 3fhl_A 54 ---VRS---FK---ELTEDPE--IDLIVVNTPDNTHYEYAGMALEAG-----KNVVVEKPFTSTTKQGEELIALAKKK-- 115 (362) T ss_dssp ---ESC---SH---HHHTCTT--CCEEEECSCGGGHHHHHHHHHHTT-----CEEEEESSCCSSHHHHHHHHHHHHHH-- T ss_pred ---CCC---HH---HHHCCCC--CCEEEECCCCHHHHHHHHHHHHCC-----CCCHHCCCCCCCCCCCHHHHHHHHHC-- T ss_conf ---399---99---9964999--988999489478899999999749-----97510287531222111577887632-- Q ss_pred HHHEEECCC-HHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHH----HHHHHHHHHHHHHHHH Q ss_conf 688351242-01256877778877477520025280333079999984677024555532----2001788765589999 Q gi|254780504|r 173 ESQIFRIDH-YLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYN----NTGALRDMIQNHLLQL 247 (492) Q Consensus 173 E~qiyRIDH-YLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gvegR~~yyD----~~GaiRDmvQNHllQl 247 (492) ...+.|.| +.--+.++-+--+=-++.+ -.|.++++.+.-..+...+..+.. .-|++.|+.- |.+.+ T Consensus 116 -~~~~~v~~~~r~~p~~~~~k~~i~~g~i-------G~i~~~~~~~~~~~~~~~~~~~~~~~~~~Gg~l~d~g~-H~~d~ 186 (362) T 3fhl_A 116 -GLMLSVYQNRRWDADFLTVRDILAKSLL-------GRLVEYESTFARYRNFIKPNTWKETGESGGGLTYNLGS-HLIDQ 186 (362) T ss_dssp -TCCEEEECGGGGSHHHHHHHHHHHTTTT-------SSEEEEEEEEECBCCC--------------CHHHHTHH-HHHHH T ss_pred -CCCEEEEEEEECCHHHHHHHHHHHHHHC-------CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHH T ss_conf -5221110121020269999999875300-------20011000112346777754444554678647887567-28889 Q ss_pred HHHHHCCCCCC Q ss_conf 99987185445 Q gi|254780504|r 248 LCLVAMEMPPS 258 (492) Q Consensus 248 L~lvAMe~P~~ 258 (492) +..+. .+|.+ T Consensus 187 ~~~l~-g~p~~ 196 (362) T 3fhl_A 187 AIQLF-GMPEA 196 (362) T ss_dssp HHHHH-CCEEE T ss_pred HHHHC-CCCEE T ss_conf 99962-99759 No 40 >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Probab=71.16 E-value=4.8 Score=18.70 Aligned_cols=59 Identities=12% Similarity=0.072 Sum_probs=36.9 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) -+.|+||||-+-+. |...| . +.+..|+++.|++-. + . .....+.. T Consensus 6 KIlItGatG~iG~~-l~~~L----l-----~~g~~V~~l~R~~~~-----------~----~----------~~~~~~~~ 50 (227) T 3dhn_A 6 KIVLIGASGFVGSA-LLNEA----L-----NRGFEVTAVVRHPEK-----------I----K----------IENEHLKV 50 (227) T ss_dssp EEEEETCCHHHHHH-HHHHH----H-----TTTCEEEEECSCGGG-----------C----C----------CCCTTEEE T ss_pred EEEEECCCCHHHHH-HHHHH----H-----HCCCEEEEEECCHHH-----------C----C----------CCCCCEEE T ss_conf 99998899889999-99999----9-----784989999868476-----------2----2----------24662377 Q ss_pred EECCCCCHHHHHHH Q ss_conf 86467897789988 Q gi|254780504|r 92 INLDVEKNYGWELL 105 (492) Q Consensus 92 ~~~d~~~~~~y~~L 105 (492) +++|+.+.++...+ T Consensus 51 i~~D~~d~~~l~~~ 64 (227) T 3dhn_A 51 KKADVSSLDEVCEV 64 (227) T ss_dssp ECCCTTCHHHHHHH T ss_pred EECCCCCHHHHHHH T ss_conf 61355546668988 No 41 >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genomics, NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus VF5} PDB: 2z95_A* Probab=63.89 E-value=6.6 Score=17.71 Aligned_cols=82 Identities=18% Similarity=0.084 Sum_probs=42.7 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) .+.|.||||=+-+.- ... |.. .+..|+|+.|..-+....+ +.. . ..-.++.+ T Consensus 5 kilVTG~tGfIGs~l-v~~---Ll~------~g~~V~~~dr~~~~~~~~~------~~~-~-----------~~~~~~~~ 56 (345) T 2z1m_A 5 RALITGIRGQDGAYL-AKL---LLE------KGYEVYGADRRSGEFASWR------LKE-L-----------GIENDVKI 56 (345) T ss_dssp EEEEETTTSHHHHHH-HHH---HHH------TTCEEEEECSCCSTTTTHH------HHH-T-----------TCTTTEEE T ss_pred EEEEECCCCHHHHHH-HHH---HHH------CCCEEEEEECCCCCCCHHH------HHH-H-----------CCCCCCEE T ss_conf 899989987899999-999---997------8398999989997643455------887-4-----------32689779 Q ss_pred EECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCH Q ss_conf 8646789778998888740576784699840695 Q gi|254780504|r 92 INLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSS 125 (492) Q Consensus 92 ~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP 125 (492) +++|..+.+.+..+-+.. + ...++.||-.+ T Consensus 57 v~~Di~d~~~~~~~~~~~---~-~d~V~hlAa~~ 86 (345) T 2z1m_A 57 IHMDLLEFSNIIRTIEKV---Q-PDEVYNLAAQS 86 (345) T ss_dssp CCCCTTCHHHHHHHHHHH---C-CSEEEECCCCC T ss_pred EEEECCCHHHHHHHHHCC---C-CEEEEECCCCC T ss_conf 980367857724556237---9-71999735337 No 42 >1esw_A Amylomaltase; (beta,alpha)8-barrel, glucanotransferase, alpha-amylase family, acarbose; HET: ACR; 1.90A {Thermus aquaticus} SCOP: c.1.8.1 PDB: 1cwy_A* 1fp8_A 1fp9_A 2owc_A* 2oww_A* 2owx_A* Probab=56.79 E-value=2 Score=21.43 Aligned_cols=24 Identities=25% Similarity=0.250 Sum_probs=16.5 Q ss_pred HHHHHHHHHCCHHHEEECCCHHHH Q ss_conf 999999873896883512420125 Q gi|254780504|r 162 EIHAITRKIFKESQIFRIDHYLGK 185 (492) Q Consensus 162 eLn~~l~~~f~E~qiyRIDHYLGK 185 (492) -.-+.|...+..-.++||||++|= T Consensus 275 ww~~rlr~~~~~~d~lRIDH~~Gf 298 (500) T 1esw_A 275 FWIRRLEKALELFHLVRIDHFRGF 298 (500) T ss_dssp HHHHHHHHHHHHCSEEEEETGGGG T ss_pred HHHHHHHHHHHHCCHHHCCCHHHH T ss_conf 999999999865361201247878 No 43 >1tz7_A 4-alpha-glucanotransferase; (beta, alpha)8- barrel; 2.15A {Aquifex aeolicus} SCOP: c.1.8.1 Probab=56.36 E-value=2.8 Score=20.41 Aligned_cols=26 Identities=23% Similarity=0.324 Sum_probs=15.3 Q ss_pred HHHHHHHHHHHHHHCCHHHEEECCCHHHH Q ss_conf 88999999999873896883512420125 Q gi|254780504|r 157 LSSAQEIHAITRKIFKESQIFRIDHYLGK 185 (492) Q Consensus 157 l~SA~eLn~~l~~~f~E~qiyRIDHYLGK 185 (492) +.=.++.-+...++| .++||||++|= T Consensus 286 y~ww~~Rl~~~~~~~---d~lRIDH~~Gf 311 (505) T 1tz7_A 286 FRWWIRRVLHNLKLF---DFLRLDHFRGF 311 (505) T ss_dssp THHHHHHHHHHHTTC---SEEEETTGGGG T ss_pred HHHHHHHHHHHHHHC---CEEEECCHHHH T ss_conf 699999999998767---97786168999 No 44 >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Probab=55.31 E-value=9.2 Score=16.70 Aligned_cols=63 Identities=17% Similarity=0.115 Sum_probs=40.1 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) .+++|.||||-+-+. |..+| ... .. ++.|++..|++-....+ -...+. T Consensus 1 ~kIlVtGatG~iG~~-lv~~L---l~~---~~-g~~V~~l~R~~~~~~~l------------------------~~~~v~ 48 (287) T 2jl1_A 1 FSIAVTGATGQLGGL-VIQHL---LKK---VP-ASQIIAIVRNVEKASTL------------------------ADQGVE 48 (287) T ss_dssp CCEEETTTTSHHHHH-HHHHH---TTT---SC-GGGEEEEESCTTTTHHH------------------------HHTTCE T ss_pred CEEEEECCCCHHHHH-HHHHH---HHC---CC-CCEEEEEECCHHHHHHH------------------------CCCCCE T ss_conf 989999998589999-99999---845---99-98799997897882544------------------------039978 Q ss_pred EEECCCCCHHHHHHH Q ss_conf 786467897789988 Q gi|254780504|r 91 YINLDVEKNYGWELL 105 (492) Q Consensus 91 Y~~~d~~~~~~y~~L 105 (492) ++++|+.++++...+ T Consensus 49 ~v~~Dl~d~~~~~~a 63 (287) T 2jl1_A 49 VRHGDYNQPESLQKA 63 (287) T ss_dssp EEECCTTCHHHHHHH T ss_pred EEEEECCCHHHHHHH T ss_conf 999616675667777 No 45 >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Probab=54.56 E-value=9.4 Score=16.62 Aligned_cols=40 Identities=25% Similarity=0.405 Sum_probs=25.9 Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC Q ss_conf 898789986443566765779999999728987578179999888699 Q gi|254780504|r 9 HNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMT 56 (492) Q Consensus 9 ~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~ 56 (492) .+-+++|+||||-+-+. |...| ...|. ..+|++++|++.. T Consensus 17 ~~kkILVtGatG~iG~~-lv~~L---l~~g~----~~~v~~~~R~~~~ 56 (242) T 2bka_A 17 QNKSVFILGASGETGRV-LLKEI---LEQGL----FSKVTLIGRRKLT 56 (242) T ss_dssp TCCEEEEECTTSHHHHH-HHHHH---HHHTC----CSEEEEEESSCCC T ss_pred CCCEEEEECCCCHHHHH-HHHHH---HHCCC----CCEEEEEECCHHH T ss_conf 89969999998499999-99999---97799----7669995367233 No 46 >1x1n_A 4-alpha-glucanotransferase; disproportionating enzyme, amylomaltase, D-enzyme; 1.80A {Solanum tuberosum} SCOP: c.1.8.1 Probab=54.02 E-value=2.4 Score=20.91 Aligned_cols=23 Identities=26% Similarity=0.284 Sum_probs=15.2 Q ss_pred HHHHHHHHCCHHHEEECCCHHHH Q ss_conf 99999873896883512420125 Q gi|254780504|r 163 IHAITRKIFKESQIFRIDHYLGK 185 (492) Q Consensus 163 Ln~~l~~~f~E~qiyRIDHYLGK 185 (492) .-+.|...+.--.++||||++|= T Consensus 304 w~~rlr~~~~~~~~lRIDH~~G~ 326 (524) T 1x1n_A 304 WVRRIQRATDLFDEFRIDHFRGF 326 (524) T ss_dssp HHHHHHHHHHHCSEEEEETGGGG T ss_pred HHHHHHHHHHHCCHHHHHHHHHH T ss_conf 99999999864661433537766 No 47 >3kgf_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathwa aromatic biosynthesis; HET: PHE TRP; 2.00A {Mycobacterium tuberculosis} PDB: 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 2w19_A 2w1a_A* Probab=51.66 E-value=8.2 Score=17.06 Aligned_cols=27 Identities=11% Similarity=0.171 Sum_probs=12.5 Q ss_pred HHHHHHHCCCCHHHCCCCEEEECCCCCCC Q ss_conf 99997306888112236136521366776 Q gi|254780504|r 269 IKVLQALQMITPENVQKLTVRGQYQSGII 297 (492) Q Consensus 269 ~kvlk~~r~~~~~~v~~~~v~GQY~~~~~ 297 (492) +++++.+-|-+. -..-+.+.++.++.+ T Consensus 319 ~~L~~~LnP~ne--pGRltLI~RmGa~ki 345 (464) T 3kgf_A 319 VEYVERLDPHNK--PGRLTLVSRMGNHKV 345 (464) T ss_dssp HHHHHHHCTTCC--TTSEEEEECCCTTTH T ss_pred HHHHHHHCCCCC--CCEEEEEEECCCHHH T ss_conf 999998498887--871899860370789 No 48 >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus aureus subsp} Probab=46.52 E-value=12 Score=15.76 Aligned_cols=75 Identities=13% Similarity=0.081 Sum_probs=43.3 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) ++.|+||||.+-+ -|.++| ...+ . ..|....|+.-.. . ......+.+ T Consensus 2 kIlVtGatG~iG~-~l~~~L---l~~g-~----~~v~~~~R~~~~~---------------~---------~~~~~~v~~ 48 (289) T 3e48_A 2 NIMLTGATGHLGT-HITNQA---IANH-I----DHFHIGVRNVEKV---------------P---------DDWRGKVSV 48 (289) T ss_dssp CEEEETTTSHHHH-HHHHHH---HHTT-C----TTEEEEESSGGGS---------------C---------GGGBTTBEE T ss_pred EEEEECCCCHHHH-HHHHHH---HHCC-C----CEEEEEECCHHHC---------------H---------HHHCCCCEE T ss_conf 4999898878999-999999---9689-9----8799997894666---------------1---------341499779 Q ss_pred EECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCH Q ss_conf 8646789778998888740576784699840695 Q gi|254780504|r 92 INLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSS 125 (492) Q Consensus 92 ~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP 125 (492) +.+|++++++.. +.++. -..+|.++-+. T Consensus 49 ~~~D~~d~~~l~---~al~g---~d~V~~~~~~~ 76 (289) T 3e48_A 49 RQLDYFNQESMV---EAFKG---MDTVVFIPSII 76 (289) T ss_dssp EECCTTCHHHHH---HHTTT---CSEEEECCCCC T ss_pred EEEECCCHHHHH---HHHCC---CCEEEEECCCC T ss_conf 997367867655---54338---98899951787 No 49 >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Probab=44.53 E-value=13 Score=15.56 Aligned_cols=32 Identities=22% Similarity=0.311 Sum_probs=23.5 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC Q ss_conf 899864435667657799999997289875781799998886 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIK 54 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~ 54 (492) ++|+||||-+.+. |...| .. .+..++++.|+. T Consensus 3 IlV~GatG~iG~~-l~~~L---~~------~G~~V~~~~R~~ 34 (221) T 3ew7_A 3 IGIIGATGRAGSR-ILEEA---KN------RGHEVTAIVRNA 34 (221) T ss_dssp EEEETTTSHHHHH-HHHHH---HH------TTCEEEEEESCS T ss_pred EEEECCCCHHHHH-HHHHH---HH------CCCEEEEEECCH T ss_conf 9999988189999-99999---97------869899998885 No 50 >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Probab=43.69 E-value=14 Score=15.47 Aligned_cols=75 Identities=11% Similarity=0.054 Sum_probs=45.5 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -+++|.||||-+-+. |..+| ...| . ...+++..|++- . .+.+...+. T Consensus 5 ~tVlVtGatG~iG~~-l~~~L---l~~g---~-~~~v~~~~R~~~-----------~--------------~~~~~~~~~ 51 (253) T 1xq6_A 5 PTVLVTGASGRTGQI-VYKKL---KEGS---D-KFVAKGLVRSAQ-----------G--------------KEKIGGEAD 51 (253) T ss_dssp CEEEEESTTSHHHHH-HHHHH---HHTT---T-TCEEEEEESCHH-----------H--------------HHHTTCCTT T ss_pred CEEEEECCCCHHHHH-HHHHH---HHCC---C-CEEEEEECCCHH-----------H--------------HHHCCCCCE T ss_conf 989998997789999-99999---9679---9-279999717877-----------8--------------865558858 Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCC Q ss_conf 7864678977899888874057678469984069 Q gi|254780504|r 91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMS 124 (492) Q Consensus 91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiP 124 (492) ++.+|.+++++...+ ++. ...++.+|-+ T Consensus 52 ~~~~d~~~~~~~~~~---~~~---~d~vi~~a~~ 79 (253) T 1xq6_A 52 VFIGDITDADSINPA---FQG---IDALVILTSA 79 (253) T ss_dssp EEECCTTSHHHHHHH---HTT---CSEEEECCCC T ss_pred EEEEECCCCHHHHHH---HCC---CCEEEEEEEE T ss_conf 999542440334456---428---6558998750 No 51 >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Probab=42.15 E-value=14 Score=15.31 Aligned_cols=73 Identities=16% Similarity=0.146 Sum_probs=43.5 Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC Q ss_conf 98789986443566765779999999728987578179999888699889999999999874234679989999898516 Q gi|254780504|r 10 NSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLI 89 (492) Q Consensus 10 ~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~ 89 (492) +.-++|.||||-+-+.- .-.| .. .+..|+++.|..-..+.+ . ...+ T Consensus 13 ~mkilVtGatG~vG~~l-~~~L---~~------~g~~V~~l~R~~~~~~~l------------~------------~~~~ 58 (342) T 2x4g_A 13 HVKYAVLGATGLLGHHA-ARAI---RA------AGHDLVLIHRPSSQIQRL------------A------------YLEP 58 (342) T ss_dssp CCEEEEESTTSHHHHHH-HHHH---HH------TTCEEEEEECTTSCGGGG------------G------------GGCC T ss_pred CCEEEEECCCCHHHHHH-HHHH---HH------CCCEEEEEECCCHHHHHH------------C------------CCCC T ss_conf 99499989998899999-9999---97------869899997881135450------------3------------3797 Q ss_pred CEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEC Q ss_conf 578646789778998888740576784699840 Q gi|254780504|r 90 FYINLDVEKNYGWELLGKLLDIDKTRIRVFYLA 122 (492) Q Consensus 90 ~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLA 122 (492) .++++|..+++++.. .++ ....+|++| T Consensus 59 ~~~~~Dl~d~~~l~~---~~~---~~d~Vih~A 85 (342) T 2x4g_A 59 ECRVAEMLDHAGLER---ALR---GLDGVIFSA 85 (342) T ss_dssp EEEECCTTCHHHHHH---HTT---TCSEEEEC- T ss_pred EEEEEECCCHHHHHH---HHH---CCCEEEECC T ss_conf 799940899999999---983---898999644 No 52 >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Probab=40.52 E-value=15 Score=15.14 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=45.1 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) -+.|+||||-+.+. |..+| ... +..|++..|.........+.+ . ...+.. T Consensus 13 KIlVtGatG~iG~~-l~~~L---l~~------g~~V~~l~R~~~~~~~~~~~l----~----------------~~~~~~ 62 (318) T 2r6j_A 13 KILIFGGTGYIGNH-MVKGS---LKL------GHPTYVFTRPNSSKTTLLDEF----Q----------------SLGAII 62 (318) T ss_dssp CEEEETTTSTTHHH-HHHHH---HHT------TCCEEEEECTTCSCHHHHHHH----H----------------HTTCEE T ss_pred EEEEECCCCHHHHH-HHHHH---HHC------CCEEEEEECCCCCCHHHHHHH----H----------------CCCCEE T ss_conf 39998999689999-99999---978------697999978974236677764----1----------------188189 Q ss_pred EECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHH Q ss_conf 86467897789988887405767846998406956 Q gi|254780504|r 92 INLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSA 126 (492) Q Consensus 92 ~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~ 126 (492) +.+|+++.+....... ....++.++-.+. T Consensus 63 ~~~d~~~~~~~~~~~~------~~~~vi~~~~~~~ 91 (318) T 2r6j_A 63 VKGELDEHEKLVELMK------KVDVVISALAFPQ 91 (318) T ss_dssp EECCTTCHHHHHHHHT------TCSEEEECCCGGG T ss_pred EEEECCCCHHHHHHHC------CCCEEEECCCCCC T ss_conf 9911443033677614------4557764256653 No 53 >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Probab=39.14 E-value=16 Score=14.99 Aligned_cols=30 Identities=30% Similarity=0.354 Sum_probs=14.8 Q ss_pred CCCCCHHHHHHHHHHHHHHCCHHHE-EECCC Q ss_conf 6678988999999999873896883-51242 Q gi|254780504|r 152 PIGSNLSSAQEIHAITRKIFKESQI-FRIDH 181 (492) Q Consensus 152 PFG~Dl~SA~eLn~~l~~~f~E~qi-yRIDH 181 (492) |-+.+-..+..|-..+...-.|.++ ||=++ T Consensus 175 ~~~~~~~~~~~l~~~~~~~~~~~~va~r~~~ 205 (486) T 2fr1_A 175 PAGSVAELARHLAAVVSGGAGEDQLALRADG 205 (486) T ss_dssp CTTCCTTHHHHHHHHHTCSSCCCEEEEETTE T ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEEECE T ss_conf 8755479999999997327899879998233 No 54 >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Probab=39.11 E-value=16 Score=14.99 Aligned_cols=153 Identities=12% Similarity=0.144 Sum_probs=75.3 Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH Q ss_conf 89878998644356676577999999972898757817999988869988999999999987423467998999989851 Q gi|254780504|r 9 HNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSL 88 (492) Q Consensus 9 ~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~ 88 (492) ....++|+|| |-.++. +...|... +..++-.+|+ .+ .+++.... +.+ T Consensus 2 ~~k~v~v~Ga-G~~g~~----~~~~L~~~------~~~v~va~r~---~~--------~~~~~~~~-----------~~~ 48 (450) T 1ff9_A 2 ATKSVLMLGS-GFVTRP----TLDVLTDS------GIKVTVACRT---LE--------SAKKLSAG-----------VQH 48 (450) T ss_dssp CCCEEEEECC-STTHHH----HHHHHHTT------TCEEEEEESS---HH--------HHHHTTTT-----------CTT T ss_pred CCCEEEEECC-CHHHHH----HHHHHHHC------CCEEEEEECC---HH--------HHHHHHHH-----------CCC T ss_conf 9887999888-799999----99999839------6969999799---99--------99999975-----------899 Q ss_pred CCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH Q ss_conf 65786467897789988887405767846998406956866677777772587644357760566789889999999998 Q gi|254780504|r 89 IFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITR 168 (492) Q Consensus 89 ~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~ 168 (492) +.+++.|..+.++ |.+.++.. .+..-++||.+-..+++.-.++|. -+|-- ..+...-+++ + T Consensus 49 ~~~~~~d~~d~~~---l~~~~~~~----dvVi~~~p~~~~~~~~~~~~~~g~-----~~vd~---~~~~~~~~~~----~ 109 (450) T 1ff9_A 49 STPISLDVNDDAA---LDAEVAKH----DLVISLIPYTFHATVIKSAIRQKK-----HVVTT---SYVSPAMMEL----D 109 (450) T ss_dssp EEEEECCTTCHHH---HHHHHTTS----SEEEECCC--CHHHHHHHHHHHTC-----EEEES---SCCCHHHHHT----H T ss_pred CCEEEECCCCHHH---HHHHHCCC----CEEEECCCCHHCHHHHHHHHHCCC-----CEEEC---CCCHHHHHHH----H T ss_conf 8549961799999---99987189----999999982005899999997398-----48951---5106779987----7 Q ss_pred HHCCHHHEEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEE Q ss_conf 738968835124201256877778877477520025280333079999 Q gi|254780504|r 169 KIFKESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQIT 216 (492) Q Consensus 169 ~~f~E~qiyRIDHYLGKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt 216 (492) +...+..+.-|=.-=--..+.|+++.+-++.+.+. ...+.++.+. T Consensus 110 ~~a~~~g~~~~~~~G~~pg~~~~~a~~~~~~l~~~---~~~~~~~~~~ 154 (450) T 1ff9_A 110 QAAKDAGITVMNEIGLDPGIDHLYAIKTIEEVHAA---GGKIKTFLSY 154 (450) T ss_dssp HHHHHTTCEEECSCBBTTBHHHHHHHHHHHHHHHT---TCEEEEEEEE T ss_pred HHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHC---CCCEEEEEEE T ss_conf 88741583796267778735789999999998741---5842235786 No 55 >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Probab=37.51 E-value=17 Score=14.82 Aligned_cols=74 Identities=20% Similarity=0.222 Sum_probs=42.7 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) ++|+||||-+-+. |.++|- .. .+ ...|++..|+.-.... +. -..+..+ T Consensus 2 IlVtGaTG~iG~~-vv~~L~---~~--~~--g~~V~~~~R~~~~~~~--------l~----------------~~~v~~~ 49 (286) T 2zcu_A 2 IAITGATGQLGHY-VIESLM---KT--VP--ASQIVAIVRNPAKAQA--------LA----------------AQGITVR 49 (286) T ss_dssp EEEESTTSHHHHH-HHHHHT---TT--SC--GGGEEEEESCTTTCHH--------HH----------------HTTCEEE T ss_pred EEEECCCCHHHHH-HHHHHH---HC--CC--CCEEEEEECCHHHHHH--------HH----------------HCCCEEE T ss_conf 8999988579999-999998---44--99--9879999789687134--------42----------------0897899 Q ss_pred ECCCCCHHHHHHHHHHHCCCCCCCEEEEECCC Q ss_conf 64678977899888874057678469984069 Q gi|254780504|r 93 NLDVEKNYGWELLGKLLDIDKTRIRVFYLAMS 124 (492) Q Consensus 93 ~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiP 124 (492) .+|+++.+++.. .++. ...+|+++-+ T Consensus 50 ~~D~~d~~~l~~---a~~g---~d~v~~~~~~ 75 (286) T 2zcu_A 50 QADYGDEAALTS---ALQG---VEKLLLISSS 75 (286) T ss_dssp ECCTTCHHHHHH---HTTT---CSEEEECC-- T ss_pred EECCCCHHHHHH---HHHH---CCEEEEECCC T ss_conf 961888666999---9963---7669995154 No 56 >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Probab=37.38 E-value=17 Score=14.80 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=15.8 Q ss_pred EEECCCCCCHHHHHHHHHHHHHHCCHHHE-EE Q ss_conf 76056678988999999999873896883-51 Q gi|254780504|r 148 VLEKPIGSNLSSAQEIHAITRKIFKESQI-FR 178 (492) Q Consensus 148 ViEKPFG~Dl~SA~eLn~~l~~~f~E~qi-yR 178 (492) +|.=+-..+...+..+-..+...-.|.++ || T Consensus 182 ~vDl~~~~~~~~~~~l~~~~~~~~~~~~va~r 213 (496) T 3mje_A 182 LIDLPETVDTRAAARLTGLLADAGGEDQLAIR 213 (496) T ss_dssp EEEECSSCCHHHHHHHHHHHHCCTTCCEEEEE T ss_pred EEECCCCCCHHHHHHHHHHHHCCCCCCEEEEE T ss_conf 99758878868999999987316899779997 No 57 >2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus} Probab=37.38 E-value=17 Score=14.80 Aligned_cols=73 Identities=12% Similarity=0.126 Sum_probs=39.9 Q ss_pred EECCCHHHHHHHHHHHHHHCCCCCC-CEEEEECCCCCCHHHH-----HHHHHHHHH-HCCHHHEE----ECCCHHHHHHH Q ss_conf 8406956866677777772587644-3577605667898899-----999999987-38968835----12420125687 Q gi|254780504|r 120 YLAMSSAFFGKISQRIHANNLVTEH-TRVVLEKPIGSNLSSA-----QEIHAITRK-IFKESQIF----RIDHYLGKEAV 188 (492) Q Consensus 120 YLAiPP~~f~~i~~~L~~~~l~~~~-~RiViEKPFG~Dl~SA-----~eLn~~l~~-~f~E~qiy----RIDHYLGKe~v 188 (492) +|.++|+.-..+.+.|.+.|+.... ..|.+ -+-|...+.. +-+...|.. -++++++- +|.|++..+++ T Consensus 40 ~L~vs~~svt~~l~~L~~~Glv~~~~~gi~L-T~~G~~~A~~i~rrHrl~e~fL~~lgi~~~~a~~~A~~iEH~ls~e~~ 118 (139) T 2x4h_A 40 DLKIAPSSVFEEVSHLEEKGLVKKKEDGVWI-TNNGTRSINYLIKAHRVIEILLVNIGIDKQTACEYSKQFDYLIPEEII 118 (139) T ss_dssp HHTCCHHHHHHHHHHHHHTTSEEEETTEEEE-CHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGSCHHHH T ss_pred HHCCCCHHHHHHHHHHHHCCCEEEECCCCEE-CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH T ss_conf 9688907999999999988995450477157-888999999999999999999999499989999999887752899999 Q ss_pred HHHHH Q ss_conf 77788 Q gi|254780504|r 189 QGLMV 193 (492) Q Consensus 189 qnil~ 193 (492) ..|-. T Consensus 119 ~~L~~ 123 (139) T 2x4h_A 119 DKLYN 123 (139) T ss_dssp HHHHH T ss_pred HHHHH T ss_conf 99999 No 58 >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Probab=36.36 E-value=17 Score=14.69 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=41.5 Q ss_pred CCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC Q ss_conf 98789986443566765779999999728987578179999888699889999999999874234679989999898516 Q gi|254780504|r 10 NSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLI 89 (492) Q Consensus 10 ~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~ 89 (492) +-+++|+||||-+-+. |..+| ...| ++.|++..|+.-+... ..+ -...+ T Consensus 5 ~k~ILVtGatG~iG~~-lv~~L---l~~g-----~~~V~~l~R~~~~~~~------~~l----------------~~~~v 53 (299) T 2wm3_A 5 KKLVVVFGGTGAQGGS-VARTL---LEDG-----TFKVRVVTRNPRKKAA------KEL----------------RLQGA 53 (299) T ss_dssp CCEEEEETTTSHHHHH-HHHHH---HHHC-----SSEEEEEESCTTSHHH------HHH----------------HHTTC T ss_pred CCEEEEECCCCHHHHH-HHHHH---HHCC-----CCEEEEEECCCCHHHH------HHH----------------HCCCC T ss_conf 9889998998889999-99999---9589-----9719999868530101------344----------------01897 Q ss_pred CEEECCCCCHHHHHHH Q ss_conf 5786467897789988 Q gi|254780504|r 90 FYINLDVEKNYGWELL 105 (492) Q Consensus 90 ~Y~~~d~~~~~~y~~L 105 (492) .++++|+.+++.+... T Consensus 54 ~~v~~D~~~~~~~~~a 69 (299) T 2wm3_A 54 EVVQGDQDDQVIMELA 69 (299) T ss_dssp EEEECCTTCHHHHHHH T ss_pred EEEEEECCCCCCCCCC T ss_conf 8999443563001123 No 59 >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Probab=35.40 E-value=18 Score=14.59 Aligned_cols=33 Identities=27% Similarity=0.396 Sum_probs=23.6 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCC Q ss_conf 7899864435667657799999997289875781799998886 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIK 54 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~ 54 (492) .+.|+||||-+.+. |...| +. .+.+++++.|++ T Consensus 2 kVlVtGatG~iG~~-lv~~L--------l~-~g~~V~~~~R~~ 34 (219) T 3dqp_A 2 KIFIVGSTGRVGKS-LLKSL--------ST-TDYQIYAGARKV 34 (219) T ss_dssp EEEEESTTSHHHHH-HHHHH--------TT-SSCEEEEEESSG T ss_pred EEEEECCCCHHHHH-HHHHH--------HH-CCCEEEEEECCH T ss_conf 39999999989999-99999--------97-839899998887 No 60 >1ytm_A Phosphoenolpyruvate carboxykinase [ATP], phosphoenolpyruvate; domain closure, nucleotide binding; HET: ATP; 2.20A {Anaerobiospirillum succiniciproducens} PDB: 1yvy_A Probab=35.06 E-value=18 Score=14.55 Aligned_cols=71 Identities=13% Similarity=0.249 Sum_probs=50.7 Q ss_pred CCEEEEECCCHHHHHHHHHH---------HHHHC-----------CCCCCCEEEEE-----------------CCCCCCH Q ss_conf 84699840695686667777---------77725-----------87644357760-----------------5667898 Q gi|254780504|r 115 RIRVFYLAMSSAFFGKISQR---------IHANN-----------LVTEHTRVVLE-----------------KPIGSNL 157 (492) Q Consensus 115 ~~rifYLAiPP~~f~~i~~~---------L~~~~-----------l~~~~~RiViE-----------------KPFG~Dl 157 (492) ...|+|=..+|.+|+.+.++ |...| ..+...+||=| ||| +- T Consensus 15 ~~~v~~Nl~~~~L~e~ai~~~~~~~~eG~lt~~GaL~v~TG~~TGRSPkDKfIV~d~~t~diwWg~v~wg~vN~pi--~~ 92 (532) T 1ytm_A 15 ATNIVHNPSHEELFAAETQASLEGFEKGTVTEMGAVNVMTGVYTGRSPKDKFIVKNEASKEIWWTSDEFKNDNKPV--TE 92 (532) T ss_dssp CSEEEESCCHHHHHHHHTCTTCCGGGCEEECTTSSEEECCTTCCSBCGGGEEEECSGGGTTSCCCCSSSCCSCEEE--CH T ss_pred CCEEEECCCHHHHHHHHHHCCCCCCCCEEECCCCCEEEECCCCCCCCCCCCEECCCCCCHHCCCCCCCCCCCCCCC--CH T ss_conf 8728869898999999986155666642785889879856885688976434447997001025786657667638--99 Q ss_pred HHHHHHHHHHHHHCCHHHEEECCCHHHHHH Q ss_conf 899999999987389688351242012568 Q gi|254780504|r 158 SSAQEIHAITRKIFKESQIFRIDHYLGKEA 187 (492) Q Consensus 158 ~SA~eLn~~l~~~f~E~qiyRIDHYLGKe~ 187 (492) +.+..|-+.+.+|+...++|..|-|-|-.. T Consensus 93 e~Fd~L~~~~~~yl~~k~lyv~D~~~Gad~ 122 (532) T 1ytm_A 93 EAWAQLKALAGKELSNKPLYVVDLFCGANE 122 (532) T ss_dssp HHHHHHHHHHHHHHSSSEEEEEEEEESSCT T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEEECCCC T ss_conf 999999999999873797799865753786 No 61 >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Probab=33.88 E-value=19 Score=14.42 Aligned_cols=59 Identities=12% Similarity=0.213 Sum_probs=35.1 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) ++|.||||=+.+. |.-.| . +.+..|+++.|...... +.....+.|+ T Consensus 3 IlITGatGfIG~~-lv~~L---~------~~g~~V~~~d~~~~~~~------------------------~~~~~~~~~~ 48 (311) T 2p5y_A 3 VLVTGGAGFIGSH-IVEDL---L------ARGLEVAVLDNLATGKR------------------------ENVPKGVPFF 48 (311) T ss_dssp EEEETTTSHHHHH-HHHHH---H------TTTCEEEEECCCSSCCG------------------------GGSCTTCCEE T ss_pred EEEECCCCHHHHH-HHHHH---H------HCCCEEEEEECCCCCCH------------------------HHHHCCCCEE T ss_conf 9998888879999-99999---9------78698999978886776------------------------4513379679 Q ss_pred ECCCCCHHHHHHH Q ss_conf 6467897789988 Q gi|254780504|r 93 NLDVEKNYGWELL 105 (492) Q Consensus 93 ~~d~~~~~~y~~L 105 (492) ++|+.+.+....+ T Consensus 49 ~~D~~d~~~~~~~ 61 (311) T 2p5y_A 49 RVDLRDKEGVERA 61 (311) T ss_dssp CCCTTCHHHHHHH T ss_pred EEECCCHHHHHHH T ss_conf 9753588999999 No 62 >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-2; 2.00A {Corynebacterium glutamicum} Probab=33.15 E-value=20 Score=14.34 Aligned_cols=40 Identities=20% Similarity=0.190 Sum_probs=28.9 Q ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC Q ss_conf 89898789986443566765779999999728987578179999888699 Q gi|254780504|r 7 NIHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMT 56 (492) Q Consensus 7 ~~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~ 56 (492) +..+-.++|.||||.+.+. |...|- . .+..++++.|++-. T Consensus 144 ~~~~mkILITGatGfIG~~-Lv~~L~---~------~Gh~V~~l~R~~~~ 183 (516) T 3oh8_A 144 DGSPLTVAITGSRGLVGRA-LTAQLQ---T------GGHEVIQLVRKEPK 183 (516) T ss_dssp CCCCCEEEEESTTSHHHHH-HHHHHH---H------TTCEEEEEESSSCC T ss_pred CCCCCEEEEECCCCHHHHH-HHHHHH---H------CCCEEEEEECCCCC T ss_conf 9999989998987589999-999999---7------87989999788643 No 63 >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Probab=32.26 E-value=20 Score=14.24 Aligned_cols=67 Identities=15% Similarity=0.091 Sum_probs=39.1 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) +.|+||||-+.+. |..+| ... +..|++..|.......-+......+. ...+..+ T Consensus 7 ILVtGatG~iG~~-l~~~L---~~~------g~~V~~l~R~~~~~~~~~~~~~~~~~----------------~~~v~~v 60 (313) T 1qyd_A 7 VLIVGGTGYIGKR-IVNAS---ISL------GHPTYVLFRPEVVSNIDKVQMLLYFK----------------QLGAKLI 60 (313) T ss_dssp EEEESTTSTTHHH-HHHHH---HHT------TCCEEEECCSCCSSCHHHHHHHHHHH----------------TTTCEEE T ss_pred EEEECCCCHHHHH-HHHHH---HHC------CCEEEEEECCCCCCCHHHHHHHHHHC----------------CCCCEEE T ss_conf 9998998489999-99999---978------89699998997435656677776520----------------4896899 Q ss_pred ECCCCCHHHHHHH Q ss_conf 6467897789988 Q gi|254780504|r 93 NLDVEKNYGWELL 105 (492) Q Consensus 93 ~~d~~~~~~y~~L 105 (492) .+|+.+..+.... T Consensus 61 ~~D~~~~~~~~~~ 73 (313) T 1qyd_A 61 EASLDDHQRLVDA 73 (313) T ss_dssp CCCSSCHHHHHHH T ss_pred EEECCCCHHHHHH T ss_conf 9642110457887 No 64 >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, lipid metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Probab=30.39 E-value=22 Score=14.03 Aligned_cols=85 Identities=11% Similarity=-0.010 Sum_probs=48.3 Q ss_pred CCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHH Q ss_conf 99888989898789986443566765779999999728987578179999888699889999999999874234679989 Q gi|254780504|r 1 MQNHTPNIHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPL 80 (492) Q Consensus 1 m~~~tp~~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~ 80 (492) |.++ +..-+.+|-||++-+-+- +-..+. +.+.+|+.++|++-..++.. +.+.... . T Consensus 1 M~~r---L~gKvalVTGas~GIG~a-----ia~~la-----~~Ga~V~~~~r~~~~~~~~~----~~l~~~~-------~ 56 (264) T 2pd6_A 1 MQNR---LRSALALVTGAGSGIGRA-----VSVRLA-----GEGATVAACDLDRAAAQETV----RLLGGPG-------S 56 (264) T ss_dssp CCCC---CTTCEEEEETTTSHHHHH-----HHHHHH-----HTTCEEEEEESSHHHHHHHH----HTC------------ T ss_pred CCCC---CCCCEEEEECCCCHHHHH-----HHHHHH-----HCCCEEEEEECCHHHHHHHH----HHHHHHH-------C T ss_conf 9762---399889992878789999-----999999-----87999999969889999999----9987422-------1 Q ss_pred HHHHHHHHCCEEECCCCCHHHHHHHHHHH Q ss_conf 99989851657864678977899888874 Q gi|254780504|r 81 KVQKFLSLIFYINLDVEKNYGWELLGKLL 109 (492) Q Consensus 81 ~~~~F~~~~~Y~~~d~~~~~~y~~L~~~l 109 (492) ........+.++++|+++.++.+.+-+.. T Consensus 57 ~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 85 (264) T 2pd6_A 57 KEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264) T ss_dssp -------CCEEEECCTTSHHHHHHHHHHH T ss_pred CCCCCCCCEEEEECCCCCHHHHHHHHHHH T ss_conf 01256774799984379999999999999 No 65 >1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A Probab=29.89 E-value=22 Score=13.97 Aligned_cols=78 Identities=18% Similarity=0.274 Sum_probs=52.8 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) ..+|-|-||.==.=|+-+|.|-.+|..-.-. .++.|++++.. -+ .+.+.+|..... T Consensus 30 ~vll~FwAtWC~pC~~~~p~L~~l~~~~~~~-~~~~vi~vs~D-~~----------------------~~~~~~~~~~~~ 85 (144) T 1i5g_A 30 TVFFYFSASWCPPSRAFTPQLIDFYKAHAEK-KNFEVMLISWD-ES----------------------AEDFKDYYAKMP 85 (144) T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-TTEEEEEEECC-SS----------------------HHHHHHHHTTCS T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECC-CC----------------------HHHHHHHHHHCC T ss_conf 8999998788987987511089999986505-78489998676-22----------------------899999999789 Q ss_pred EEECCCCCHHHHHHHHHHHCCC Q ss_conf 7864678977899888874057 Q gi|254780504|r 91 YINLDVEKNYGWELLGKLLDID 112 (492) Q Consensus 91 Y~~~d~~~~~~y~~L~~~l~~~ 112 (492) |....+.+......|.+..... T Consensus 86 ~~~~~~~d~~~~~~l~~~y~v~ 107 (144) T 1i5g_A 86 WLALPFEDRKGMEFLTTGFDVK 107 (144) T ss_dssp SEECCTTCHHHHHHHHHHTTCC T ss_pred CCCEEEECCHHHHHHHHHCCCC T ss_conf 8621110702546679877977 No 66 >1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X* Probab=28.63 E-value=16 Score=14.92 Aligned_cols=48 Identities=10% Similarity=0.195 Sum_probs=21.3 Q ss_pred EECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC Q ss_conf 84069568666777777725876443577605667898899999999987389 Q gi|254780504|r 120 YLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFK 172 (492) Q Consensus 120 YLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~ 172 (492) =-|+-|.-|....+ +...|.....+|-|+-| |-+.+..+-..+...+. T Consensus 319 IgatT~~ey~k~~e--~d~al~rrF~~I~V~Ep---s~e~t~~IL~~~~~~~E 366 (758) T 1r6b_X 319 IGSTTYQEFSNIFE--KDRALARRFQKIDITEP---SIEETVQIINGLKPKYE 366 (758) T ss_dssp EEEECHHHHHCCCC--CTTSSGGGEEEEECCCC---CHHHHHHHHHHHHHHHH T ss_pred EEECCHHHHHHHHH--HCHHHHHHCEECCCCCC---CHHHHHHHHHHHHHHHH T ss_conf 97379999998860--46698950555147997---99999999987888875 No 67 >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; 15025322, structural genomics, JCSG, protein structure initiative, PSI; HET: NAI UNL; 2.05A {Clostridium acetobutylicum atcc 824} SCOP: c.2.1.2 Probab=27.47 E-value=24 Score=13.69 Aligned_cols=40 Identities=18% Similarity=0.321 Sum_probs=28.4 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCH Q ss_conf 98987899864435667657799999997289875781799998886998 Q gi|254780504|r 8 IHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTV 57 (492) Q Consensus 8 ~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~ 57 (492) .++-.+.|.||||=+.+. |.+.| . +.+..++++.|.+.+- T Consensus 10 ~~~MKILItGatGfIG~~-lv~~L--------~-~~g~~V~~~~r~~~dl 49 (292) T 1vl0_A 10 HHHMKILITGANGQLGRE-IQKQL--------K-GKNVEVIPTDVQDLDI 49 (292) T ss_dssp --CEEEEEESTTSHHHHH-HHHHH--------T-TSSEEEEEECTTTCCT T ss_pred CCCCEEEEECCCCHHHHH-HHHHH--------H-HCCCEEEEEECHHCCC T ss_conf 998758998999889999-99999--------8-6879899932312577 No 68 >1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A Probab=27.21 E-value=24 Score=13.66 Aligned_cols=19 Identities=37% Similarity=0.510 Sum_probs=15.3 Q ss_pred CEEEECCCCHHHHHHHHHH Q ss_conf 7899864435667657799 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPA 30 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PA 30 (492) -+||+|+++|..++||+-. T Consensus 107 pvVl~GP~k~~l~~~Ll~~ 125 (295) T 1kjw_A 107 PIIILGPTKDRANDDLLSE 125 (295) T ss_dssp CEEEESTTHHHHHHHHHHH T ss_pred EEEEECCCHHHHHHHHHHH T ss_conf 4899889748999999875 No 69 >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Probab=27.10 E-value=24 Score=13.64 Aligned_cols=73 Identities=15% Similarity=0.203 Sum_probs=43.9 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH Q ss_conf 98987899864435667657799999997289875781799998886998899999999998742346799899998985 Q gi|254780504|r 8 IHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLS 87 (492) Q Consensus 8 ~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~ 87 (492) +..-+.+|-||++-+-+- +-..+. +...+|+.++|++ +.. +.+.+.+. . .. T Consensus 14 L~gKvalVTGas~GIG~a-----iA~~la-----~~Ga~V~i~~r~~---~~~-~~~~~~~~----~-----------~~ 64 (278) T 2bgk_A 14 LQDKVAIITGGAGGIGET-----TAKLFV-----RYGAKVVIADIAD---DHG-QKVCNNIG----S-----------PD 64 (278) T ss_dssp TTTCEEEEESTTSHHHHH-----HHHHHH-----HTTCEEEEEESCH---HHH-HHHHHHHC----C-----------TT T ss_pred CCCCEEEEECCCCHHHHH-----HHHHHH-----HCCCEEEEEECCH---HHH-HHHHHHHC----C-----------CC T ss_conf 799989994868789999-----999999-----8799899997988---999-99999835----8-----------99 Q ss_pred HCCEEECCCCCHHHHHHHHHHH Q ss_conf 1657864678977899888874 Q gi|254780504|r 88 LIFYINLDVEKNYGWELLGKLL 109 (492) Q Consensus 88 ~~~Y~~~d~~~~~~y~~L~~~l 109 (492) .+.++++|++++++.+.+-+.. T Consensus 65 ~~~~~~~Dvt~~~~v~~~~~~~ 86 (278) T 2bgk_A 65 VISFVHCDVTKDEDVRNLVDTT 86 (278) T ss_dssp TEEEEECCTTCHHHHHHHHHHH T ss_pred CEEEEECCCCCHHHHHHHHHHH T ss_conf 6799985789999999999999 No 70 >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehydrogenase, reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Probab=25.86 E-value=26 Score=13.49 Aligned_cols=78 Identities=14% Similarity=0.123 Sum_probs=43.9 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -+++|.||||-+-+.- ..+|- .. ++.|++..|+.-+... ..+. -...+. T Consensus 6 ktIlVtGaTG~iG~~l-v~~Ll---~~------G~~V~~l~R~~~~~~~------~~l~---------------~~~gv~ 54 (352) T 1xgk_A 6 KTIAVVGATGRQGASL-IRVAA---AV------GHHVRAQVHSLKGLIA------EELQ---------------AIPNVT 54 (352) T ss_dssp CCEEEESTTSHHHHHH-HHHHH---HT------TCCEEEEESCSCSHHH------HHHH---------------TSTTEE T ss_pred CEEEEECCCCHHHHHH-HHHHH---HC------CCEEEEEECCCCCCCH------HHCC---------------CCCCCE T ss_conf 9899989971899999-99999---58------9959999778530012------3401---------------148988 Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCC Q ss_conf 7864678977899888874057678469984069 Q gi|254780504|r 91 YINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMS 124 (492) Q Consensus 91 Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiP 124 (492) .+.+|+.++.+ .+..... ....+|.+..+ T Consensus 55 ~~~gD~~d~~~--~~~~~~~---g~~~v~~~~~~ 83 (352) T 1xgk_A 55 LFQGPLLNNVP--LMDTLFE---GAHLAFINTTS 83 (352) T ss_dssp EEESCCTTCHH--HHHHHHT---TCSEEEECCCS T ss_pred EEEEECCCCHH--HHHHHHC---CCCEEEECCCC T ss_conf 99975899588--9999875---88589974672 No 71 >1q0q_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; oxidoreductase; HET: DXP NDP; 1.90A {Escherichia coli} SCOP: a.69.3.1 c.2.1.3 d.81.1.3 PDB: 1q0l_A* 1q0h_A* 1k5h_A 1onn_A 1ono_A 1onp_A* 1jvs_A* 1t1r_A* 1t1s_A* 2egh_A* 3iie_A Probab=25.78 E-value=26 Score=13.48 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=28.9 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH Q ss_conf 78998644356676577999999972898757817999988869988999999999 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKE 67 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~ 67 (492) +++|+|+||-.-+--| ... ...|+ .|.|+|.+- .-+.+...+.+.+. T Consensus 11 ~I~ILGSTGSIG~qtL-----~Vi--~~~~~-~f~v~~Lsa-~~N~~~L~~q~~ef 57 (406) T 1q0q_A 11 QLTILGSTGSIGCSTL-----DVV--RHNPE-HFRVVALVA-GKNVTRMVEQCLEF 57 (406) T ss_dssp EEEEETTTSHHHHHHH-----HHH--HHCTT-TEEEEEEEE-SSCHHHHHHHHHHH T ss_pred EEEEECCCCHHHHHHH-----HHH--HHCCC-CCEEEEEEE-CCCHHHHHHHHHHH T ss_conf 8999755869999999-----999--83948-748999995-98799999999981 No 72 >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Probab=25.28 E-value=26 Score=13.42 Aligned_cols=77 Identities=14% Similarity=0.085 Sum_probs=48.8 Q ss_pred CCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH Q ss_conf 89898789986443566765779999999728987578179999888699889999999999874234679989999898 Q gi|254780504|r 7 NIHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFL 86 (492) Q Consensus 7 ~~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~ 86 (492) ++..-+.+|-||++-+-+- +-..++ +...+|+.++|++-..++..+.+. +++- T Consensus 11 ~l~gK~alVTGas~GIG~a-----ia~~la-----~~Ga~V~i~~r~~~~~~~~~~~l~-----------------~~~g 63 (265) T 1h5q_A 11 SFVNKTIIVTGGNRGIGLA-----FTRAVA-----AAGANVAVIYRSAADAVEVTEKVG-----------------KEFG 63 (265) T ss_dssp CCTTEEEEEETTTSHHHHH-----HHHHHH-----HTTEEEEEEESSCTTHHHHHHHHH-----------------HHHT T ss_pred CCCCCEEEEECCCCHHHHH-----HHHHHH-----HCCCEEEEEECCHHHHHHHHHHHH-----------------HHCC T ss_conf 7899979992888789999-----999999-----879989999797788999999999-----------------9709 Q ss_pred HHCCEEECCCCCHHHHHHHHHHHC Q ss_conf 516578646789778998888740 Q gi|254780504|r 87 SLIFYINLDVEKNYGWELLGKLLD 110 (492) Q Consensus 87 ~~~~Y~~~d~~~~~~y~~L~~~l~ 110 (492) ..+.++++|+++.++.+.+-+.+. T Consensus 64 ~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (265) T 1h5q_A 64 VKTKAYQCDVSNTDIVTKTIQQID 87 (265) T ss_dssp CCEEEEECCTTCHHHHHHHHHHHH T ss_pred CCEEEEEECCCCHHHHHHHHHHHH T ss_conf 957999901899999999999999 No 73 >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding motif, oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Probab=25.15 E-value=26 Score=13.40 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=45.0 Q ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 87899864435667657799999997289875781799998886998899999999998742346799899998985165 Q gi|254780504|r 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 11 ~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -|++|=|||+-+=+- +-..+. .+.+....|+.++|++-..++..+ ..+ --.++. T Consensus 22 ktVlITGas~GIG~a-----ia~~l~--~la~~G~~V~~~~R~~~~~~~l~~----~~~---------------~~~~~~ 75 (267) T 1sny_A 22 NSILITGCNRGLGLG-----LVKALL--NLPQPPQHLFTTCRNREQAKELED----LAK---------------NHSNIH 75 (267) T ss_dssp SEEEESCCSSHHHHH-----HHHHHH--TSSSCCSEEEEEESCTTSCHHHHH----HHH---------------HCTTEE T ss_pred CEEEEECCCCHHHHH-----HHHHHH--HHHHCCCEEEEEECCHHHHHHHHH----HHH---------------CCCCEE T ss_conf 989991898789999-----999999--888679999999889899999999----985---------------299889 Q ss_pred EEECCCCCHHHHHHHHHHH Q ss_conf 7864678977899888874 Q gi|254780504|r 91 YINLDVEKNYGWELLGKLL 109 (492) Q Consensus 91 Y~~~d~~~~~~y~~L~~~l 109 (492) ++++|+++.++.+.+.+.+ T Consensus 76 ~~~~Dvs~~~~v~~~~~~i 94 (267) T 1sny_A 76 ILEIDLRNFDAYDKLVADI 94 (267) T ss_dssp EEECCTTCGGGHHHHHHHH T ss_pred EEEEECCCHHHHHHHHHHH T ss_conf 9996379999999998655 No 74 >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, structural genomics; HET: NAP; 2.25A {Homo sapiens} Probab=24.28 E-value=27 Score=13.29 Aligned_cols=81 Identities=7% Similarity=0.010 Sum_probs=46.8 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH Q ss_conf 98987899864435667657799999997289875781799998886998899999999998742346799899998985 Q gi|254780504|r 8 IHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLS 87 (492) Q Consensus 8 ~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~ 87 (492) ++.-+.+|-||++-+-+- +-..++ +...+|+.++|+.-..++....+.+.. ..++++-. T Consensus 43 L~GKvalVTGas~GIG~a-----iA~~la-----~~Ga~Vvi~~r~~~~~~~~~~~l~~~~-----------~ei~~~G~ 101 (346) T 3kvo_A 43 LAGCTVFITGASRGIGKA-----IALKAA-----KDGANIVIAAKTAQPHPKLLGTIYTAA-----------EEIEAVGG 101 (346) T ss_dssp TTTCEEEEETTTSHHHHH-----HHHHHH-----TTTCEEEEEESCCSCCSSSCCCHHHHH-----------HHHHHTTC T ss_pred CCCCEEEEECCCCHHHHH-----HHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHHH-----------HHHHHCCC T ss_conf 699879993857689999-----999999-----879989999787777789999999999-----------99997098 Q ss_pred HCCEEECCCCCHHHHHHHHHHH Q ss_conf 1657864678977899888874 Q gi|254780504|r 88 LIFYINLDVEKNYGWELLGKLL 109 (492) Q Consensus 88 ~~~Y~~~d~~~~~~y~~L~~~l 109 (492) ++..+++|+.+.++.+.+-+.. T Consensus 102 ~~~~~~~Dv~d~~~v~~~v~~~ 123 (346) T 3kvo_A 102 KALPCIVDVRDEQQISAAVEKA 123 (346) T ss_dssp EEEEEECCTTCHHHHHHHHHHH T ss_pred EEEEEECCCCCHHHHHHHHHHH T ss_conf 3899965668999999999999 No 75 >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Probab=22.52 E-value=29 Score=13.06 Aligned_cols=68 Identities=19% Similarity=0.140 Sum_probs=38.2 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHH-HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC Q ss_conf 78998644356676577999999972898757817999988869988-99999999998742346799899998985165 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVE-SYRSFVDKELQRYLKDGEYNPLKVQKFLSLIF 90 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e-~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~ 90 (492) -++|+||||.+-+.- ..+| ... +..+.++.|+.-... .......+.+. ...+. T Consensus 6 KILItGatG~iG~~l-~~~L---~~~------G~~V~~~~R~~~~~~~~~~~~~~~~~~----------------~~~v~ 59 (321) T 3c1o_A 6 KIIIYGGTGYIGKFM-VRAS---LSF------SHPTFIYARPLTPDSTPSSVQLREEFR----------------SMGVT 59 (321) T ss_dssp CEEEETTTSTTHHHH-HHHH---HHT------TCCEEEEECCCCTTCCHHHHHHHHHHH----------------HTTCE T ss_pred EEEEECCCCHHHHHH-HHHH---HHC------CCCEEEEECCCCCCCCHHHHHHHHHHC----------------CCCEE T ss_conf 899989982899999-9999---978------990899989986655677888787641----------------49819 Q ss_pred EEECCCCCHHHHHHH Q ss_conf 786467897789988 Q gi|254780504|r 91 YINLDVEKNYGWELL 105 (492) Q Consensus 91 Y~~~d~~~~~~y~~L 105 (492) ++.+|+++.++...+ T Consensus 60 ~v~~D~~d~~~~~~~ 74 (321) T 3c1o_A 60 IIEGEMEEHEKMVSV 74 (321) T ss_dssp EEECCTTCHHHHHHH T ss_pred EEEEECCCHHHHHHH T ss_conf 999645770444542 No 76 >1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1 Probab=21.81 E-value=24 Score=13.70 Aligned_cols=16 Identities=38% Similarity=0.972 Sum_probs=10.4 Q ss_pred EEEEEECCCCCCCCEE Q ss_conf 9999970858678577 Q gi|254780504|r 321 AIKANIDNPRWSGIPF 336 (492) Q Consensus 321 a~~l~idn~RW~gVPF 336 (492) .+++.||+.+|.|.|. T Consensus 63 ~I~VeId~~~w~G~~v 78 (109) T 1nnx_A 63 TINVDIDHKRWNGVTV 78 (109) T ss_dssp EEEEECCGGGSTTCCC T ss_pred CEEEEECHHHCCCCCC T ss_conf 5999978344289565 No 77 >3afn_B A1-R, 4-deoxy-L-erythro-5-hexoseulose-uronic acid reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Probab=21.41 E-value=31 Score=12.90 Aligned_cols=76 Identities=8% Similarity=0.096 Sum_probs=46.9 Q ss_pred CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC-CHHHHHHHHHHHHHHHCCCCCCCHHHHHH Q ss_conf 98989878998644356676577999999972898757817999988869-98899999999998742346799899998 Q gi|254780504|r 6 PNIHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKM-TVESYRSFVDKELQRYLKDGEYNPLKVQK 84 (492) Q Consensus 6 p~~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~-~~e~fr~~v~~~l~~~~~~~~~~~~~~~~ 84 (492) |++..-+.+|-||++-+-+- +-..++ +.+.+++.++|+.- ..++..+ .++. T Consensus 3 ~dL~gK~alVTGas~GIG~a-----ia~~la-----~~Ga~V~i~~r~~~~~~~~~~~----~~~~-------------- 54 (258) T 3afn_B 3 PDLKGKRVLITGSSQGIGLA-----TARLFA-----RAGAKVGLHGRKAPANIDETIA----SMRA-------------- 54 (258) T ss_dssp GGGTTCEEEETTCSSHHHHH-----HHHHHH-----HTTCEEEEEESSCCTTHHHHHH----HHHH-------------- T ss_pred CCCCCCEEEEECCCCHHHHH-----HHHHHH-----HCCCEEEEEECCCHHHHHHHHH----HHHH-------------- T ss_conf 88899879993798599999-----999999-----8799999997984421999999----9996-------------- Q ss_pred HHHHCCEEECCCCCHHHHHHHHHHH Q ss_conf 9851657864678977899888874 Q gi|254780504|r 85 FLSLIFYINLDVEKNYGWELLGKLL 109 (492) Q Consensus 85 F~~~~~Y~~~d~~~~~~y~~L~~~l 109 (492) .-.++.++++|++++++.+.+-+.+ T Consensus 55 ~g~~~~~~~~Dv~~~~~v~~~~~~~ 79 (258) T 3afn_B 55 DGGDAAFFAADLATSEACQQLVDEF 79 (258) T ss_dssp TTCEEEEEECCTTSHHHHHHHHHHH T ss_pred CCCCEEEEECCCCCHHHHHHHHHHH T ss_conf 2996899981389999999999999 No 78 >1vkr_A Mannitol-specific PTS system enzyme iiabc components; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli O157} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B* Probab=20.92 E-value=30 Score=12.96 Aligned_cols=34 Identities=9% Similarity=0.220 Sum_probs=25.3 Q ss_pred HHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHH Q ss_conf 9999999998738968835124201256877778 Q gi|254780504|r 159 SAQEIHAITRKIFKESQIFRIDHYLGKEAVQGLM 192 (492) Q Consensus 159 SA~eLn~~l~~~f~E~qiyRIDHYLGKe~vqnil 192 (492) |..+|-+.+..+.+..+++-|++||.++-++.+. T Consensus 65 st~~l~~~~~~~~~~~~vi~V~n~Ld~~ei~~li 98 (125) T 1vkr_A 65 THRDLTERAMRQVPQAQHISLTNFLDSGLYTSLT 98 (125) T ss_dssp EEHHHHHHHHHHCTTSEEEEESCTTCHHHHHHHH T ss_pred ECHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH T ss_conf 8789989998319998399983278969999999 No 79 >2ysr_A DEP domain-containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Probab=20.74 E-value=21 Score=14.06 Aligned_cols=38 Identities=18% Similarity=0.291 Sum_probs=22.1 Q ss_pred HEEECCCHHHHHHHHHHHHHHHCC-------------CCCHHHHCCCCEEEE Q ss_conf 835124201256877778877477-------------520025280333079 Q gi|254780504|r 175 QIFRIDHYLGKEAVQGLMVFRFAN-------------TFYESLWNNKYIDHV 213 (492) Q Consensus 175 qiyRIDHYLGKe~vqnil~lRFaN-------------~~~e~~WNr~~I~~V 213 (492) .+|+ +-|.|+|+|+-|+..-.++ .+-..+++..+|.+| T Consensus 35 ~~y~-~cF~G~eaVdWL~~~~~~~~~~~~~~tR~~A~~lgq~Ll~~g~i~~V 85 (105) T 2ysr_A 35 KKYG-NCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQLLRKFLKNHVIEDI 85 (105) T ss_dssp SSCS-SCEEHHHHHHHHHHHHHHSSSSTTTCCHHHHHHHHHHHHHTTSSEES T ss_pred EECC-CEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEC T ss_conf 8988-55246999999999755114667657999999999999988987963 No 80 >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, PSI-2, protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Probab=20.58 E-value=32 Score=12.79 Aligned_cols=38 Identities=16% Similarity=0.341 Sum_probs=26.0 Q ss_pred CCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC Q ss_conf 989878998644356676577999999972898757817999988869 Q gi|254780504|r 8 IHNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKM 55 (492) Q Consensus 8 ~~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~ 55 (492) +..-.+.|+||||-+.+. |...| .. .+..+++..|++- T Consensus 19 ~~~MkIlI~GasG~iG~~-lv~~L---l~------~g~~V~~l~R~~~ 56 (236) T 3e8x_A 19 FQGMRVLVVGANGKVARY-LLSEL---KN------KGHEPVAMVRNEE 56 (236) T ss_dssp --CCEEEEETTTSHHHHH-HHHHH---HH------TTCEEEEEESSGG T ss_pred CCCCEEEEECCCCHHHHH-HHHHH---HH------CCCEEEEEECCHH T ss_conf 799908999998889999-99999---97------8598999988878 No 81 >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Probab=20.20 E-value=33 Score=12.73 Aligned_cols=63 Identities=17% Similarity=0.159 Sum_probs=39.2 Q ss_pred EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEE Q ss_conf 89986443566765779999999728987578179999888699889999999999874234679989999898516578 Q gi|254780504|r 13 FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFYI 92 (492) Q Consensus 13 lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y~ 92 (492) -.|.||||=+-+. |...| ...|... ..+.|++.+|+..... .. ...+.++ T Consensus 4 aLVTGatGfiG~~-l~~~L---l~~g~~~-~~~~V~~~~R~~~~~~--------------~~-----------~~~v~~v 53 (364) T 2v6g_A 4 ALIVGVTGIIGNS-LAEIL---PLADTPG-GPWKVYGVARRTRPAW--------------HE-----------DNPINYV 53 (364) T ss_dssp EEEETTTSHHHHH-HHHHT---TSTTCTT-CSEEEEEEESSCCCSC--------------CC-----------SSCCEEE T ss_pred EEEECCCCHHHHH-HHHHH---HHCCCCC-EEEEEEEEECCCCCCC--------------CC-----------CCCCEEE T ss_conf 9995789889999-99999---9688985-0579999737874111--------------25-----------8982799 Q ss_pred ECCCCCHHHHHHH Q ss_conf 6467897789988 Q gi|254780504|r 93 NLDVEKNYGWELL 105 (492) Q Consensus 93 ~~d~~~~~~y~~L 105 (492) ++|++++++...+ T Consensus 54 ~~Dl~d~~~~~~~ 66 (364) T 2v6g_A 54 QCDISDPDDSQAK 66 (364) T ss_dssp ECCTTSHHHHHHH T ss_pred ECCCCCHHHHHHH T ss_conf 8468999999999 No 82 >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoid, oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Probab=20.19 E-value=33 Score=12.73 Aligned_cols=67 Identities=15% Similarity=0.059 Sum_probs=38.6 Q ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCE Q ss_conf 78998644356676577999999972898757817999988869988999999999987423467998999989851657 Q gi|254780504|r 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSLIFY 91 (492) Q Consensus 12 ~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~~~Y 91 (492) -++|+||||-+-+ -|..+|- .. +..+....|......+-.+.. +.+. ...+.. T Consensus 12 KVlV~GaTG~iG~-~lv~~Ll---~~------g~~V~vl~R~~~~~~~k~~~~-~~l~----------------~~gv~~ 64 (346) T 3i6i_A 12 RVLIAGATGFIGQ-FVATASL---DA------HRPTYILARPGPRSPSKAKIF-KALE----------------DKGAII 64 (346) T ss_dssp CEEEECTTSHHHH-HHHHHHH---HT------TCCEEEEECSSCCCHHHHHHH-HHHH----------------HTTCEE T ss_pred EEEEECCCCHHHH-HHHHHHH---HC------CCCEEEEECCCCCCHHHHHHH-HHHH----------------HCCCEE T ss_conf 1999898968999-9999999---68------994899989998775578999-8875----------------089389 Q ss_pred EECCCCCHHHHHHH Q ss_conf 86467897789988 Q gi|254780504|r 92 INLDVEKNYGWELL 105 (492) Q Consensus 92 ~~~d~~~~~~y~~L 105 (492) +.+|+.+.++...+ T Consensus 65 v~gD~~d~~~l~~a 78 (346) T 3i6i_A 65 VYGLINEQEAMEKI 78 (346) T ss_dssp EECCTTCHHHHHHH T ss_pred EEEECCCCCHHHHH T ss_conf 99305551039999 Done!