RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780504|ref|YP_003064917.1| glucose-6-phosphate 1-dehydrogenase [Candidatus Liberibacter asiaticus str. psy62] (492 letters) >gnl|CDD|180222 PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated. Length = 495 Score = 652 bits (1686), Expect = 0.0 Identities = 233/493 (47%), Positives = 316/493 (64%), Gaps = 19/493 (3%) Query: 10 NSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISS--RIIGICRIKMTVESYRSFVDKE 67 D +IFG TGDLA+RKL PALYN Y + + RIIG+ R + E +R V + Sbjct: 9 PCDLVIFGATGDLARRKLLPALYNLY---KAGLLPEDFRIIGVARRDWSDEDFREVVREA 65 Query: 68 LQRYLKDGEYNPLKVQKFLSLIFYINLDVEKNYGWELLGKLLD-IDKTR----IRVFYLA 122 L+ + + ++ ++FLS ++Y++ DV +E L +LL+ +D+ R RVFYLA Sbjct: 66 LKEFART-PFDEEVWERFLSRLYYVSGDVTDPESYERLKELLEELDEERGTGGNRVFYLA 124 Query: 123 MSSAFFGKISQRIHANNLVTEH--TRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRID 180 + FG I + + A L RVV+EKP G +L+SA+E++ ++FKE QI+RID Sbjct: 125 TPPSLFGTICENLAAAGLNEGGGWRRVVIEKPFGHDLASARELNDQVGEVFKEEQIYRID 184 Query: 181 HYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMI 240 HYLGKE VQ L+ RFAN +E LWN YIDHVQIT AET+GVE R YY+ +GALRDM+ Sbjct: 185 HYLGKETVQNLLALRFANALFEPLWNRNYIDHVQITVAETVGVEGRGGYYDKSGALRDMV 244 Query: 241 QNHLLQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGI 300 QNHLLQLL LVAME P S++A SI++EK+KVL+AL+ ITPE+V++ TVRGQY +G I G Sbjct: 245 QNHLLQLLALVAMEPPASLDADSIRDEKVKVLRALRPITPEDVKENTVRGQYTAGWIGGK 304 Query: 301 PVKGYLEEIPLGI---SDTETFVAIKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKP 357 PV GY EE G+ S TETFVA+K IDN RW+G+PFYLRTGK L K ++EIVI KP Sbjct: 305 PVPGYREE--EGVNPDSTTETFVALKLEIDNWRWAGVPFYLRTGKRLPKKVTEIVIVFKP 362 Query: 358 APCTIFDHQMSKIETNKLILRLQNNGEIEQFITTKDHSTSNMKLKTTALRICCCSKRIKR 417 P +F+ ++ NKL++R+Q + I K M+L+ L + Sbjct: 363 PPHNLFEESAEELGPNKLVIRIQPDEGISLRFNAKV-PGEGMELRPVKLDFSYSEAFGEA 421 Query: 418 TPDGYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAAGTWGPDQS 477 +P+ YERLL+D++ +QTLF+ DEVE WKW D IL++W+ Y AGTWGP+ + Sbjct: 422 SPEAYERLLLDVMLGDQTLFVRRDEVEAAWKWVDPILEAWEADGGPPPPYPAGTWGPEAA 481 Query: 478 DVLLQKDGRRWHN 490 D LL +DGR W Sbjct: 482 DALLARDGRSWRE 494 >gnl|CDD|183793 PRK12853, PRK12853, glucose-6-phosphate 1-dehydrogenase; Provisional. Length = 482 Score = 566 bits (1462), Expect = e-162 Identities = 209/484 (43%), Positives = 287/484 (59%), Gaps = 17/484 (3%) Query: 11 SDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQR 70 +IFG TGDLA+RKL PALY RIIG+ R + E +R+ V + L+ Sbjct: 9 CTLVIFGATGDLARRKLLPALYR-LARAGLLPEDLRIIGVGRDDWSDEQWRARVRESLRA 67 Query: 71 YLKDGEYNPLKVQKFLSLIFYINLDVEKNYGWELLGKLLD-IDKTRIRVFYLAMSSAFFG 129 + DG ++ + + + Y+ DV +L + + VFYLA+ + F Sbjct: 68 FGADG-FDDAVWDRLAARLSYVQGDVTDP---ADYARLAEALGPGGNPVFYLAVPPSLFA 123 Query: 130 KISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHYLGKEAVQ 189 + + + A L+ E RVVLEKP G +L+SA+ ++A K+F E QI+RIDH+LGKE VQ Sbjct: 124 PVVENLGAAGLLPEGRRVVLEKPFGHDLASARALNATLAKVFDEDQIYRIDHFLGKETVQ 183 Query: 190 GLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQLLC 249 L+ RFAN E LWN +IDHVQIT AET+GVE R +Y+ TGALRDM+QNHLLQLL Sbjct: 184 NLLALRFANALLEPLWNRNHIDHVQITVAETLGVEGRGGFYDATGALRDMVQNHLLQLLA 243 Query: 250 LVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLEEI 309 LVAME P S +A ++++EK KVL+A++ + P++V TVRGQY +G + G PV GY EE Sbjct: 244 LVAMEPPASFDADAVRDEKAKVLRAIRPLDPDDVH--TVRGQYTAGTVGGEPVPGYREE- 300 Query: 310 PLGI---SDTETFVAIKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTIFDHQ 366 G+ S TETFVA+K IDN RW+G+PFYLRTGK LA+ +EIVI KP P +F Sbjct: 301 -PGVDPDSRTETFVALKLEIDNWRWAGVPFYLRTGKRLAERRTEIVITFKPVPHALFRGT 359 Query: 367 MSKIETNKLILRLQNNGEIEQFITTKDHSTSNMKLKTTALRICCCSKRIKRTPDGYERLL 426 N+L++RLQ + I + K M+L+ L +R + YERLL Sbjct: 360 -GVEPPNRLVIRLQPDEGISLELNVKRPGPG-MRLRPVELDADYADD--ERPLEAYERLL 415 Query: 427 MDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAAGTWGPDQSDVLLQKDGR 486 +D++ + TLF+ DEVE W+ D +L +W Y AG+WGP +D LL +DGR Sbjct: 416 LDVLRGDPTLFVRADEVEAAWRIVDPVLDAWAADPVPPHEYPAGSWGPAAADALLARDGR 475 Query: 487 RWHN 490 W Sbjct: 476 GWRE 479 >gnl|CDD|162079 TIGR00871, zwf, glucose-6-phosphate 1-dehydrogenase. This is a well-studied enzyme family, with sequences available from well over 50 species. The trusted cutoff is set above the score for the Drosophila melanogaster CG7140 gene product, a homolog of unknown function. G6PD homologs from the bacteria Aquifex aeolicus and Helicobacter pylori lack several motifs well conserved most other members, were omitted from the seed alignment, and score well below the trusted cutoff. Length = 482 Score = 490 bits (1263), Expect = e-139 Identities = 214/491 (43%), Positives = 305/491 (62%), Gaps = 21/491 (4%) Query: 10 NSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQ 69 +IFG +GDLA++KLFPALY + N RI+G+ R ++VE +R V + + Sbjct: 2 PCILVIFGASGDLARKKLFPALYRLFRNGLLPP-DFRIVGVARRDLSVEDFRKQVREAII 60 Query: 70 RYLKDGEYNPLKVQKFLSLIFYINLDVEKNYGWELLGKLLD-IDKTR----IRVFYLAMS 124 ++ + ++ F + Y++ D + + ++ L + L+ +DKTR R+FYLA Sbjct: 61 KFETEEI--DEQLDDFAQRLSYVSGDYDDDESYDSLNEHLEQLDKTRGTEGNRLFYLATP 118 Query: 125 SAFFGKISQRIHANNLVTEH-TRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHYL 183 + FG I +++ + L + +RVV+EKP G +L+SAQE++ R +FKE QI+RIDHYL Sbjct: 119 PSVFGTIIKQLKKHGLNEQGWSRVVVEKPFGHDLASAQELNKQLRAVFKEDQIYRIDHYL 178 Query: 184 GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNH 243 GKE VQ L+V RFAN +E LWN +YIDHVQIT AE+ GVE R YY+ +GALRDM+QNH Sbjct: 179 GKETVQNLLVLRFANQIFEPLWNRRYIDHVQITFAESFGVEGRGGYYDKSGALRDMVQNH 238 Query: 244 LLQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVK 303 LLQLLCLVAME P S +A SI++EK+KVL+AL+ I P++ VRGQY +G I G+ V Sbjct: 239 LLQLLCLVAMEPPASFDADSIRDEKVKVLKALRPIDPDDNN--VVRGQYGAGEIGGVSVP 296 Query: 304 GYLEE--IPLGISDTETFVAIKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCT 361 GYLEE + S TETF A+K IDN RW+G+PFYLRTGK L + ++EI I K P Sbjct: 297 GYLEEEGVDKD-STTETFAALKLYIDNWRWAGVPFYLRTGKRLPEKVTEIRIQFKDVPLL 355 Query: 362 IFDHQMSKIETNKLILRLQNNGEIE-QFITTKDHSTSNMKLKTTALRICCCSKRIKRTPD 420 +F N+L++R+Q + + +F K N + + L S+ + P+ Sbjct: 356 LFKQNE---RNNELVIRIQPDEGVYLKFNAKKP--GLNFETRPVKLDFSYGSRFGELLPE 410 Query: 421 GYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQ-KVDYYAAGTWGPDQSDV 479 YERLL+D + +QTLF+ DEVEE W+ IL++W Y AG+WGP ++D Sbjct: 411 AYERLLLDALLGDQTLFVRDDEVEEAWRIVTPILEAWAANKGPSPPNYPAGSWGPKEADE 470 Query: 480 LLQKDGRRWHN 490 L++KDGR W Sbjct: 471 LIKKDGRSWRK 481 >gnl|CDD|183794 PRK12854, PRK12854, glucose-6-phosphate 1-dehydrogenase; Provisional. Length = 484 Score = 397 bits (1023), Expect = e-111 Identities = 171/506 (33%), Positives = 253/506 (50%), Gaps = 59/506 (11%) Query: 12 DFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRY 71 F++FG TGDLAKRKL P L++ RI+G R ++ E++R L + Sbjct: 13 VFVLFGATGDLAKRKLLPGLFHLARAGLLPP-DWRIVGTGRGDVSAEAFREHARDALDEF 71 Query: 72 LKDGEYNPLKVQKFLSLIFYINLDVEKNYGWELLGKLLDIDKTRI-------RVFYLAMS 124 + + + +F + Y+ L + R V YLA+ Sbjct: 72 GA-RKLDDGEWARFAKRLRYVPGGFLSAGPGALAAA---VAAARAELGGDARLVHYLAVP 127 Query: 125 SAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHYLG 184 + F +++ + L E +RVV+EKP G++L+SA+ ++A ++F ESQIFRIDH+LG Sbjct: 128 PSAFLDVTRALGEAGLA-EGSRVVMEKPFGTDLASAEALNAAVHEVFDESQIFRIDHFLG 186 Query: 185 KEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHL 244 KEA Q ++ FRFAN +E +WN ++IDHVQI ET+GV+ R +Y+ TGA RDM+ HL Sbjct: 187 KEAAQNILAFRFANGLFEPIWNREFIDHVQIDVPETLGVDTRAAFYDATGAYRDMVVTHL 246 Query: 245 LQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKG 304 Q+L VAME P ++E +I EK KV ++++ + P V VRGQY G Sbjct: 247 FQVLAFVAMEPPTALEPDAISEEKNKVFRSMRPLDPAEV----VRGQYS----------G 292 Query: 305 YLEEIPLGI---SDTETFVAIKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCT 361 Y +E G+ S TETFVA+K IDN RW+G+PFYLRTGK +A+ I IA + P + Sbjct: 293 YRDEP--GVAPDSTTETFVALKVWIDNWRWAGVPFYLRTGKRMAEGQRIISIAFREPPYS 350 Query: 362 IFDHQMSKIET-NKLILRLQNNGEIEQFITTK--------DHSTSNMKLKTTALRICCCS 412 +F + + L L +N ++ K D + LK T + Sbjct: 351 MFPAGSVGAQGPDHLTFDLADNSKVSLSFYGKRPGPGMRLDKLSLQFSLKDTGPKG---- 406 Query: 413 KRIKRTPDGYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAAGTW 472 + YERL++D + + TLF D +E W+ S +L+ V YA G+W Sbjct: 407 ----DVLEAYERLILDALRGDHTLFTTADGIESLWEVSQPLLED----PPPVKPYAPGSW 458 Query: 473 GPDQSDVLLQKDG------RRWHNNT 492 GP+ L D R W Sbjct: 459 GPNAIHQLAAPDAWRLPFEREWRELG 484 >gnl|CDD|185548 PTZ00309, PTZ00309, glucose-6-phosphate 1-dehydrogenase; Provisional. Length = 542 Score = 334 bits (858), Expect = 3e-92 Identities = 173/496 (34%), Positives = 265/496 (53%), Gaps = 29/496 (5%) Query: 5 TPNIHNSD---FIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYR 61 + S I+ G +GDLAK+K FPAL+ Y I+G R KM Sbjct: 46 VKDEDKSRALTIIVLGASGDLAKKKTFPALFQLYCEGLLPS-EVNIVGYARSKM--SDVE 102 Query: 62 SFVDKELQRYLKDGEYNPLKVQKFLSLIFYINLDVEKNYGWELLGKLLD--------IDK 113 + + L R+ K + +++FL I YI+ +++ ++ L KL++ +K Sbjct: 103 RWKKETLARFFKRLDDRECHLEQFLKHISYISGSYDEDEDFKRLNKLIERMEEAFQGPEK 162 Query: 114 TRIRVFYLAMSSAFFGKISQRIHANNLVTEH--TRVVLEKPIGSNLSSAQEIHAITRKIF 171 R+FYLA+ + F + + IH ++++ RV++EKP G +L S++E+ +F Sbjct: 163 GGNRLFYLALPPSVFASVCEGIH-RGCMSKNGWVRVIVEKPFGRDLESSEELSNQLEPLF 221 Query: 172 KESQIFRIDHYLGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYN 231 ESQ++RIDHYLGKE VQ L+V RFAN +E LWN I VQIT E IG E R Y++ Sbjct: 222 DESQLYRIDHYLGKEMVQNLIVLRFANRVFEPLWNRNNIACVQITFKEDIGTEGRGGYFD 281 Query: 232 NTGALRDMIQNHLLQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQ 291 + G +RD++QNHLLQ+L L+AME P S+ A+ I++EK+KVL+ ++ I E V GQ Sbjct: 282 SYGIIRDVMQNHLLQILALLAMEKPVSLSAEDIRDEKVKVLKCIEPIKMEE----CVLGQ 337 Query: 292 YQSGIINGIPVKGYLEE--IPLGISDTETFVAIKANIDNPRWSGIPFYLRTGKYLAKHIS 349 Y + + GYLE+ +P S T TF A +I+N RW G+PF L GK L + Sbjct: 338 YTAS--ADGSIPGYLEDEGVPKD-STTPTFAAAVLHINNDRWEGVPFILEAGKALEERYV 394 Query: 350 EIVIALKPAPCTIFDHQMSKIETNKLILRLQNNGEIEQFITTKDHSTSNMKLKTTALRIC 409 EI I K ++ N+L++R Q + + IT K SN L T L + Sbjct: 395 EIRIQFKGVDEFRPSGDDTQ--RNELVIRAQPSEAMYLKITAKVPGLSN-DLHQTELDLT 451 Query: 410 CCSKRIKRTPDGYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAA 469 ++ R PD YERL++D + + T F+ DE++ W+ +L K + Y Sbjct: 452 YKTRYNVRLPDAYERLILDALLGDSTNFVRKDELDVAWRIFTPLLHQIDRGEVKPEPYPF 511 Query: 470 GTWGPDQSDVLLQKDG 485 G+ GP ++D L++K+G Sbjct: 512 GSRGPKEADELIKKNG 527 >gnl|CDD|178154 PLN02539, PLN02539, glucose-6-phosphate 1-dehydrogenase. Length = 491 Score = 310 bits (796), Expect = 5e-85 Identities = 177/487 (36%), Positives = 260/487 (53%), Gaps = 38/487 (7%) Query: 14 IIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLK 73 I+ G +GDLAK+K FPAL+N Y I G R K+T E R ++ YLK Sbjct: 21 IVLGASGDLAKKKTFPALFNLYRQGFLPPDEVHIFGYARSKITDEELRD----RIRGYLK 76 Query: 74 -DGEYNPLKVQKFLSLIFYINLDVEKNYGWELLGKLL--------DIDKTRIRVFYLAMS 124 + V KFL LI Y++ + G+ L K + + + R+FYLA+ Sbjct: 77 DEKNAPAEAVSKFLQLIKYVSGAYDSEEGFRRLDKEISEHEISKNSAEGSSRRLFYLALP 136 Query: 125 SAFFGKISQRIHAN--NLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHY 182 + + + + I N TR+V+EKP G +L SA+E+ + ++F ESQ++RIDHY Sbjct: 137 PSVYPPVCKMIKKCCMNKSGLWTRIVVEKPFGKDLESAEELSSQIGELFDESQLYRIDHY 196 Query: 183 LGKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQN 242 LGKE VQ L+V RFAN F+ LWN I +VQI E G E R Y++ G +RD+IQN Sbjct: 197 LGKELVQNLLVLRFANRFFLPLWNRDNIANVQIVFREDFGTEGRGGYFDEYGIIRDIIQN 256 Query: 243 HLLQLLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPV 302 HLLQ+LCLVAME P S++ + I++EK+KVLQ+++ I E V V GQY+ Sbjct: 257 HLLQVLCLVAMEKPVSLKPEHIRDEKVKVLQSVEPIKDEEV----VLGQYE--------- 303 Query: 303 KGYLEE--IPLGISDTETFVAIKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPC 360 GY ++ +P S+T TF ++ I+N RW G+PF L+ GK L +EI + K P Sbjct: 304 -GYRDDPTVPDD-SNTPTFASVVLRINNERWEGVPFILKAGKALDSRKAEIRVQFKDVPG 361 Query: 361 TIFDHQMSKIETNKLILRLQNNGEIEQFITTKDHSTSNMKLKTTALRICCCSKRIKRT-- 418 IF Q K N+ ++RLQ + + +T K M + L + +R + Sbjct: 362 DIFKCQ--KQGRNEFVIRLQPSEAMYMKLTVKQPGL-EMSTVQSELDL-SYGQRYQDVVI 417 Query: 419 PDGYERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAAGTWGPDQSD 478 P+ YERL++D I +Q F+ DE++ W+ +L K Y G+ GP ++D Sbjct: 418 PEAYERLILDTIRGDQQHFVRRDELKAAWEIFTPLLHRIDAGKVKPIPYKQGSRGPAEAD 477 Query: 479 VLLQKDG 485 LL+K G Sbjct: 478 ELLEKAG 484 >gnl|CDD|177967 PLN02333, PLN02333, glucose-6-phosphate 1-dehydrogenase. Length = 604 Score = 275 bits (705), Expect = 2e-74 Identities = 172/486 (35%), Positives = 264/486 (54%), Gaps = 22/486 (4%) Query: 15 IFGGTGDLAKRKLFPALYNNYTNREENQISSR--IIGICRIKMTVESYRSFVDKELQRYL 72 + G +GDLAK+K+FPAL+ Y E + I G R KMT R+ V K L + Sbjct: 122 VVGASGDLAKKKIFPALFALYY---EGCLPEHFTIFGYARSKMTDAELRNMVSKTLTCRI 178 Query: 73 KDGEYNPLKVQKFLSLIFYIN--LDVEKNYGWELLGKLLDIDKTRI--RVFYLAMS-SAF 127 E K+++FL FY + D ++++ EL KL + + R+ R+FYL++ + F Sbjct: 179 DKRENCGEKMEEFLKRCFYHSGQYDSQEHFA-ELDKKLKEHEGGRVSNRLFYLSIPPNIF 237 Query: 128 FGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHYLGKEA 187 + + + V TRV++EKP G + S+ + ++ +E QIFRIDHYLGKE Sbjct: 238 VDAVKCASSSASSVNGWTRVIVEKPFGRDSESSAALTKSLKQYLEEDQIFRIDHYLGKEL 297 Query: 188 VQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQL 247 V+ L V RF+N +E LW+ +YI +VQ +E G E R Y++N G +RD++QNHLLQ+ Sbjct: 298 VENLSVLRFSNLIFEPLWSRQYIRNVQFIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQI 357 Query: 248 LCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLE 307 L L AME P S++A+ I+NEK+KVL++++ I E+V V GQY+S G+ Y + Sbjct: 358 LALFAMETPVSLDAEDIRNEKVKVLRSMRPIQLEDV----VIGQYKSHTKGGVTYPAYTD 413 Query: 308 E--IPLGISDTETFVAIKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTIFDH 365 + +P G S T TF A IDN RW G+PF ++ GK L +EI + + P +++ Sbjct: 414 DKTVPKG-SLTPTFAAAALFIDNARWDGVPFLMKAGKALHTKSAEIRVQFRHVPGNLYNR 472 Query: 366 QMSK---IETNKLILRLQNNGEIEQFITTKDHSTSNMKLKTTALRICCCSKRIKRTPDGY 422 TN+L++R+Q + I I K M+L + L + ++ K PD Y Sbjct: 473 NFGTDLDQATNELVIRVQPDEAIYLKINNKVPGLG-MRLDRSNLNLLYAARYSKEIPDAY 531 Query: 423 ERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAAGTWGPDQSDVLLQ 482 ERLL+D I + LF+ DE++ W +LK + +YY G+ GP + L Sbjct: 532 ERLLLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIIPEYYPYGSRGPVGAHYLAA 591 Query: 483 KDGRRW 488 + RW Sbjct: 592 RYKVRW 597 >gnl|CDD|178246 PLN02640, PLN02640, glucose-6-phosphate 1-dehydrogenase. Length = 573 Score = 259 bits (664), Expect = 8e-70 Identities = 165/487 (33%), Positives = 256/487 (52%), Gaps = 24/487 (4%) Query: 15 IFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKD 74 + G +GDLAK+K+FPAL+ + + + + G R K+T E R + L + Sbjct: 93 VVGASGDLAKKKIFPALFALFYEDWLPENFT-VFGYARTKLTDEELRDMISSTLTCRIDQ 151 Query: 75 GEYNPLKVQKFLSLIFYI--NLDVEKNYGWELLGKLLDIDKTRI--RVFYLAMSSAFFGK 130 E K+ +FL FY D E+++ EL KL + + ++ R+FYL++ F Sbjct: 152 RENCGDKMDQFLKRCFYHSGQYDSEEDFA-ELNKKLKEKEAGKLSNRLFYLSIPPNIFVD 210 Query: 131 I----SQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHYLGKE 186 + S R + N TRV++EKP G + S+ E+ ++ E QIFRIDHYLGKE Sbjct: 211 VVRCASLRASSEN---GWTRVIVEKPFGRDSESSGELTRCLKQYLTEEQIFRIDHYLGKE 267 Query: 187 AVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVEDRVDYYNNTGALRDMIQNHLLQ 246 V+ L V RF+N +E LW+ YI +VQ+ +E G E R Y++N G +RD++QNHLLQ Sbjct: 268 LVENLSVLRFSNLVFEPLWSRNYIRNVQLIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQ 327 Query: 247 LLCLVAMEMPPSVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYL 306 +L L AME P S++A+ I+NEK+KVL++++ + E+V + GQY+ G Y Sbjct: 328 ILALFAMETPVSLDAEDIRNEKVKVLRSMKPLQLEDV----IVGQYKGHSKGGKSYPAYT 383 Query: 307 EE--IPLGISDTETFVAIKANIDNPRWSGIPFYLRTGKYLAKHISEIVIALKPAPCTIFD 364 ++ +P S T TF A I+N RW G+PF ++ GK L +EI + + P ++ Sbjct: 384 DDPTVPKH-SLTPTFAAAALFINNARWDGVPFLMKAGKALHTRRAEIRVQFRHVPGNLYK 442 Query: 365 HQMSK---IETNKLILRLQNNGEIEQFITTKDHSTSNMKLKTTALRICCCSKRIKRTPDG 421 TN+L+LR+Q + I I K M+L + L + ++ + PD Sbjct: 443 RNFGTDLDKATNELVLRVQPDEAIYLKINNKVPGLG-MRLDRSDLNLLYRARYPREIPDA 501 Query: 422 YERLLMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAAGTWGPDQSDVLL 481 YERLL+D I + LF+ DE++ W +LK + + Y G+ GP + L Sbjct: 502 YERLLLDAIEGERRLFIRSDELDAAWALFTPLLKELEEKKIIPELYPYGSRGPVGAHYLA 561 Query: 482 QKDGRRW 488 K RW Sbjct: 562 AKYNVRW 568 >gnl|CDD|140243 PTZ00216, PTZ00216, acyl-CoA synthetase; Provisional. Length = 700 Score = 31.5 bits (72), Expect = 0.46 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 30/88 (34%) Query: 399 MKLKTTAL---RICCCSKRIKRTPDGYERLLMDIIHANQTLFMGYDEV------------ 443 + AL + K + + DG ER M++ H N+T ++ Y E+ Sbjct: 81 ERGDRRALAYRPVERVEKEVVKDADGKERT-MEVTHFNETRYITYAELWERIVNFGRGLA 139 Query: 444 -------------EET-WKWSDSILKSW 457 EET W+W SI W Sbjct: 140 ELGLTKGSNVAIYEETRWEWLASIYGIW 167 >gnl|CDD|183642 PRK12640, flgF, flagellar basal body rod protein FlgF; Reviewed. Length = 246 Score = 29.4 bits (67), Expect = 2.0 Identities = 11/24 (45%), Positives = 12/24 (50%) Query: 117 RVFYLAMSSAFFGKISQRIHANNL 140 R Y AMS A Q + ANNL Sbjct: 3 RALYTAMSGASQNLNQQAVVANNL 26 >gnl|CDD|177284 PHA00452, PHA00452, T3/T7-like RNA polymerase. Length = 807 Score = 28.1 bits (63), Expect = 5.2 Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Query: 28 FPALYNNYTNREENQISSRIIGICRIKMTVE 58 FP ++ Y EE ++ R++G+ R+++ V Sbjct: 665 FP-VWQEYRKPEEKRVRLRLMGVARVQLYVN 694 >gnl|CDD|163126 TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases. Length = 764 Score = 28.0 bits (63), Expect = 5.5 Identities = 9/22 (40%), Positives = 11/22 (50%) Query: 274 ALQMITPENVQKLTVRGQYQSG 295 L I P+NV L V Y +G Sbjct: 152 PLDQINPDNVGNLKVAWTYHTG 173 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.320 0.136 0.405 Gapped Lambda K H 0.267 0.0730 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 8,069,251 Number of extensions: 524180 Number of successful extensions: 942 Number of sequences better than 10.0: 1 Number of HSP's gapped: 902 Number of HSP's successfully gapped: 15 Length of query: 492 Length of database: 5,994,473 Length adjustment: 97 Effective length of query: 395 Effective length of database: 3,898,497 Effective search space: 1539906315 Effective search space used: 1539906315 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (26.5 bits)