HHsearch alignment for GI: 254780505 and conserved domain: pfam04198
>pfam04198 Sugar-bind Putative sugar-binding domain. This probable domain is found in bacterial transcriptional regulators such as DeoR and SorC. These proteins have an amino-terminal helix-turn-helix pfam00325 that binds to DNA. This domain is probably the ligand regulator binding region. SorC is regulated by sorbose and other members of this family are likely to be regulated by other sugar substrates.
Probab=98.35 E-value=3.7e-05 Score=51.56 Aligned_cols=192 Identities=14% Similarity=0.099 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89999999999999999999728977999879864699998787630795323899813210035673202788999762
Q gi|254780505|r 12 KKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFISKFFL 91 (234)
Q Consensus 12 ~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ll 91 (234)
T Consensus 31 ~~~~~~~vg~~aA~~L~~~l~~-~-~~igvswG~Tl~~~~~~l~~~--~~~~~~vV~l~G-g~~~~~-~~~~~~i~~~lA 104 (255)
T pfam04198 31 EPDTLEALGRAAAQYLSSLLKD-G-DVVGVGWGRTLSAVAEALTPK--SLRDVKFVPLIG-GLGRDG-SAHSNTVVARLA 104 (255)
T ss_pred CHHHHHHHHHHHHHHHHHHCCC-C-CEEEECCCHHHHHHHHHCCCC--CCCCCEEEECCC-CCCCCC-CCCHHHHHHHHH
T ss_conf 1689999999999999985778-9-889973568999999956977--889978997889-899887-848999999999
Q ss_pred CCCCCCCCEEECCCCCCCHHHHH-----HHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCC----CCCEEECCCC--C
Q ss_conf 35677632144458878989999-----99999996315877648994478877143402786----4100221566--7
Q gi|254780505|r 92 QNKAQKASFIPLYYPQKTIEEAI-----RIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKG----DTLSIALDTH--T 160 (234)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~----~~l~~~~~~~--~ 160 (234)
T Consensus 105 ~~~~~~~~~l~aP~~~~s~~~~~~l~~e~~i~~vl~~~~--~~dial~gIG~~~~~s~~~~~g~~~~~~~~~l~~~gAvG 182 (255)
T pfam04198 105 QKFGGEYYLLPAPAYASSAALRRGLLAEPSIQEVLDLAR--RADVAIVGIGTALEMAPLVKRGFLTEEELAELRELGAVG 182 (255)
T ss_pred HHHCCEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHH--HCCEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHCCCEE
T ss_conf 996997899706802699999999985958999999998--689999972477876668882799999999999889868
Q ss_pred CCCEEEECCCCC----C-CEE-EEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf 431899538998----7-215-87087888415829999818348999999980898
Q gi|254780505|r 161 PRSVIAIKDYTS----N-EQR-MTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD 211 (234)
Q Consensus 161 ~~~~~~~~~~~~----p-~~R-ITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~ 211 (234)
T Consensus 183 di~g~f~D~~G~~v~~~~~~r~igi~l~~Lr~ip~~I~vA~G~~K~~aI~aALrgg~ 239 (255)
T pfam04198 183 EILGRFFDAEGRVVDTELNDRVIGLSLDDLRKIPKVIAVAGGESKAEAILAALRGGL 239 (255)
T ss_pred EHHHHEECCCCCCCCCCCCCCEEECCHHHHCCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 971321478999935645464540787996579978999678065999999983599