Query gi|254780505|ref|YP_003064918.1| 6-phosphogluconolactonase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 234
No_of_seqs 118 out of 1678
Neff 7.6
Searched_HMMs 23785
Date Tue May 31 21:31:36 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780505.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nwp_A 6-phosphogluconolactona 100.0 0 0 399.1 24.8 231 1-234 2-233 (233)
2 3lhi_A Putative 6-phosphogluco 100.0 0 0 400.5 22.8 227 4-233 3-231 (232)
3 3ico_A 6PGL, 6-phosphogluconol 100.0 0 0 388.0 23.1 225 1-230 21-258 (268)
4 3lwd_A 6-phosphogluconolactona 100.0 0 0 387.8 21.0 221 7-233 5-225 (226)
5 3oc6_A 6-phosphogluconolactona 100.0 0 0 375.2 21.9 226 1-231 5-241 (248)
6 3e15_A Glucose-6-phosphate 1-d 100.0 0 0 369.0 22.0 231 3-233 26-294 (312)
7 1vl1_A 6PGL, 6-phosphogluconol 100.0 0 0 371.2 19.2 215 5-230 15-230 (232)
8 1y89_A DEVB protein; structura 100.0 0 0 365.6 22.5 214 1-226 1-224 (238)
9 3css_A 6-phosphogluconolactona 100.0 0 0 365.9 18.7 226 2-233 4-258 (267)
10 3hn6_A Glucosamine-6-phosphate 100.0 0 0 358.1 23.8 227 3-231 21-261 (289)
11 3eb9_A 6-phosphogluconolactona 100.0 0 0 356.6 23.5 227 2-230 3-253 (266)
12 1fs5_A Glucosamine-6-phosphate 100.0 0 0 351.0 22.1 226 4-231 1-240 (266)
13 1ne7_A Glucosamine-6-phosphate 100.0 0 0 350.7 21.5 226 4-231 1-240 (289)
14 2bkx_A Glucosamine-6-phosphate 100.0 0 0 339.9 22.4 222 4-231 1-234 (242)
15 2ri0_A Glucosamine-6-phosphate 100.0 0 0 334.1 19.0 220 3-231 1-227 (234)
16 2o0m_A Transcriptional regulat 99.6 9.5E-16 4E-20 115.1 5.2 192 12-210 120-323 (345)
17 2okg_A Central glycolytic gene 99.6 2.2E-15 9.4E-20 112.8 6.7 199 5-211 24-237 (255)
18 2gnp_A Transcriptional regulat 99.1 9E-10 3.8E-14 78.5 12.6 194 11-211 35-245 (266)
19 3nze_A Putative transcriptiona 99.0 6.7E-09 2.8E-13 73.2 12.3 207 10-223 33-264 (267)
20 3efb_A Probable SOR-operon reg 99.0 5E-09 2.1E-13 74.0 10.9 193 11-211 38-250 (266)
21 2w48_A Sorbitol operon regulat 98.8 1.5E-07 6.2E-12 64.9 14.0 191 14-211 90-299 (315)
22 3kv1_A Transcriptional repress 98.3 1.3E-05 5.5E-10 53.0 11.9 195 10-211 32-245 (267)
23 2r5f_A Transcriptional regulat 98.2 8.3E-05 3.5E-09 48.1 14.4 195 11-211 35-248 (264)
24 2dpl_A GMP synthetase, GMP syn 83.6 2.1 8.9E-05 21.0 6.0 54 19-75 6-59 (308)
25 2a33_A Hypothetical protein; s 80.1 2.9 0.00012 20.3 5.7 37 98-136 111-147 (215)
26 1t35_A Hypothetical protein YV 77.1 3.5 0.00015 19.7 4.9 37 98-136 99-135 (191)
27 1ydh_A AT5G11950; structural g 75.8 3.8 0.00016 19.5 5.6 21 99-119 108-128 (216)
28 1rcu_A Conserved hypothetical 75.2 3.9 0.00017 19.4 4.8 84 29-118 52-140 (195)
29 3a2k_A TRNA(Ile)-lysidine synt 72.0 4.7 0.0002 18.9 7.5 103 30-135 14-126 (464)
30 3p52_A NH(3)-dependent NAD(+) 67.0 6 0.00025 18.3 5.3 59 11-77 5-67 (249)
31 1weh_A Conserved hypothetical 60.5 5.5 0.00023 18.5 3.0 22 98-119 99-120 (171)
32 1wek_A Hypothetical protein TT 57.2 9.1 0.00038 17.2 5.7 39 99-142 134-173 (217)
33 3kwm_A Ribose-5-phosphate isom 56.6 9.3 0.00039 17.1 3.9 43 10-58 7-49 (224)
34 2ivn_A O-sialoglycoprotein end 54.7 10 0.00042 16.9 4.1 35 12-46 40-79 (330)
35 2e18_A NH(3)-dependent NAD(+) 51.8 11 0.00047 16.6 5.0 47 19-70 9-57 (257)
36 3dpi_A NAD+ synthetase; ssgcid 51.0 11 0.00048 16.6 7.5 39 11-51 25-65 (285)
37 2pjm_A Ribose-5-phosphate isom 48.7 12 0.00049 16.5 3.0 40 12-57 3-42 (226)
38 2v7y_A Chaperone protein DNAK; 45.6 9 0.00038 17.2 2.1 50 11-60 273-327 (509)
39 3eno_A Putative O-sialoglycopr 45.1 14 0.00059 16.0 4.3 35 12-46 45-84 (334)
40 1odf_A YGR205W, hypothetical 3 45.0 14 0.0006 16.0 5.1 57 19-75 12-76 (290)
41 1lk5_A D-ribose-5-phosphate is 44.5 14 0.00061 15.9 3.6 41 11-57 2-42 (229)
42 3hhe_A Ribose-5-phosphate isom 44.4 14 0.00061 15.9 5.2 42 11-58 23-64 (255)
43 1uj6_A Ribose 5-phosphate isom 43.8 15 0.00062 15.9 2.9 39 13-57 6-44 (227)
44 1xng_A NH(3)-dependent NAD(+) 43.7 15 0.00062 15.9 4.8 58 10-73 3-62 (268)
45 1m0s_A Ribose-5-phosphate isom 41.5 16 0.00068 15.6 3.4 40 12-57 3-42 (219)
46 1kqp_A NAD+ synthase;, NH(3)-d 40.2 17 0.00071 15.5 4.6 37 11-49 17-55 (271)
47 1dkg_D Molecular chaperone DNA 39.9 17 0.00072 15.5 3.3 20 189-208 335-354 (383)
48 3fiu_A NH(3)-dependent NAD(+) 38.8 18 0.00074 15.4 3.9 58 7-73 4-65 (249)
49 1wy5_A TILS, hypothetical UPF0 38.5 18 0.00075 15.4 9.2 103 31-136 21-133 (317)
50 1gpm_A GMP synthetase, XMP ami 37.3 19 0.00078 15.2 5.0 88 21-117 215-311 (525)
51 1x3l_A Hypothetical protein PH 36.5 16 0.00068 15.6 2.2 37 9-46 98-134 (440)
52 3kbq_A Protein TA0487; structu 35.7 20 0.00083 15.1 6.2 69 66-143 9-81 (172)
53 1xho_A Chorismate mutase; sout 34.8 17 0.00073 15.5 2.1 65 11-75 45-110 (148)
54 3iuy_A Probable ATP-dependent 34.3 21 0.00088 15.0 7.0 12 34-45 57-68 (228)
55 2ab1_A Hypothetical protein; H 33.6 19 0.00078 15.3 2.1 17 126-142 59-75 (122)
56 1wxi_A NH(3)-dependent NAD(+) 31.5 23 0.00098 14.7 4.1 56 11-70 18-82 (275)
57 2cyj_A Hypothetical protein PH 31.4 23 0.00098 14.7 2.5 21 122-142 54-74 (118)
58 3en9_A Glycoprotease, O-sialog 31.2 23 0.00099 14.6 4.2 59 14-73 227-286 (540)
59 1wrb_A DJVLGB; RNA helicase, D 30.8 24 0.001 14.6 7.6 63 5-72 103-183 (253)
60 3h1q_A Ethanolamine utilizatio 28.6 26 0.0011 14.4 2.9 13 35-47 93-105 (272)
61 1o8b_A Ribose 5-phosphate isom 26.5 17 0.00073 15.5 1.0 39 13-57 4-42 (219)
62 3lwb_A D-alanine--D-alanine li 26.4 3.6 0.00015 19.6 -2.6 18 129-146 110-131 (373)
63 1yuw_A Heat shock cognate 71 k 25.1 30 0.0013 14.0 4.4 50 11-60 301-355 (554)
64 1ni5_A Putative cell cycle pro 24.7 31 0.0013 13.9 9.1 101 30-135 9-115 (433)
65 3bor_A Human initiation factor 23.6 32 0.0014 13.8 6.9 26 46-71 156-181 (237)
66 3aez_A Pantothenate kinase; tr 23.5 32 0.0014 13.8 5.6 42 34-75 88-134 (312)
67 2b8n_A Glycerate kinase, putat 23.5 20 0.00085 15.0 0.9 36 10-46 103-138 (429)
68 3gyg_A NTD biosynthesis operon 23.0 33 0.0014 13.7 6.1 43 17-60 43-85 (289)
69 2a7y_A Hypothetical protein RV 22.8 29 0.0012 14.1 1.5 23 126-151 37-59 (83)
70 3d2f_A Heat shock protein homo 22.3 28 0.0012 14.2 1.3 20 38-57 337-356 (675)
71 1sq5_A Pantothenate kinase; P- 21.4 36 0.0015 13.5 8.7 44 32-75 76-124 (308)
No 1
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=100.00 E-value=0 Score=399.07 Aligned_cols=231 Identities=37% Similarity=0.574 Sum_probs=210.2
Q ss_pred CCC-CEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 987-2899948989999999999999999999728977999879864699998787630795323899813210035673
Q gi|254780505|r 1 MLQ-YKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENL 79 (234)
Q Consensus 1 M~~-~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~ 79 (234)
|+. ..+++|+|.+++++.+|+.+++.++++++++|.|+|+||||+||+.+|+.|++..+||+||++|++|||||+.+|+
T Consensus 2 m~~~~~~~~f~~~~~l~~~la~~i~~~l~~~i~~~~~~~l~lsGGstp~~ly~~L~~~~i~w~~v~~~~~DEr~v~~~~~ 81 (233)
T 3nwp_A 2 MIKETVFKSFDTPSALEQQLASKIASQLQEAVDARGKASLVVSGGSTPLKLFQLLSMKSIDWSDVYITLADERWVEADAD 81 (233)
T ss_dssp CCCCCCEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHHHCCSCGGGEEEEESEEESSCTTST
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCHHCEEEEEEEECCCCCCC
T ss_conf 97677277369999999999999999999999867988999768821999999987344892435487314762676654
Q ss_pred CCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEECCCC
Q ss_conf 20278899976235677632144458878989999999999963158776489944788771434027864100221566
Q gi|254780505|r 80 RSNQSFISKFFLQNKAQKASFIPLYYPQKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIALDTH 159 (234)
Q Consensus 80 ~Sn~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~~~~ 159 (234)
+||+++++++|+++.+.+..+++......+++.+++.|++.+.... ++||+++||||+||||||||||++.+.....
T Consensus 82 ~Sn~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~lLG~G~DGHiAslfP~~~~~~~~~~-- 158 (233)
T 3nwp_A 82 ASNERLVREHLLQNRASNAKFRGLKNMFSTAEAGADMAAESLSNFP-RPFDVVVLGMGNDGHTCSWFPCSAELENALT-- 158 (233)
T ss_dssp TCHHHHHHHHTSSGGGGGSEECCSCCSSSSHHHHHHHHHHHTTTSC-SSBSEEEECCCTTSCBTTBCTTCTTHHHHHH--
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCCEEEECCCCCCCEEECCCCCHHHHHCCC--
T ss_conf 1069999997523788742224778865588999999999986069-9875898667898745346899766653124--
Q ss_pred CCCCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEECC
Q ss_conf 743189953899872158708788841582999981834899999998089832060899961899968998339
Q gi|254780505|r 160 TPRSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLEVHWTS 234 (234)
Q Consensus 160 ~~~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~V~W~~ 234 (234)
....++.+..+++|++|||||++.|++|++|+|+++|++|+++++++++++++..|||++|+.|.++++.|||++
T Consensus 159 ~~~~~~~~~~~~~p~~RITltl~~i~~ak~i~ll~~G~~K~~~~~~~l~~~~~~~~Pas~l~~~~~~~v~v~w~~ 233 (233)
T 3nwp_A 159 TQALCVATNPTTAPHGRITLSKSAILNSRQIYLHLVGEQKLSVYRQALESDDVHAMPIRAVLAQRKTPVDVFWSA 233 (233)
T ss_dssp CCSSEEEECCSSSSSCEEEECHHHHHSBSCEEEEEESHHHHHHHHHHHTCCCTTTCTTHHHHSCSSSCEEEEEEC
T ss_pred CCEEEECCCCCCCCCCEEECCHHHHHHCCEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECC
T ss_conf 532684478888997289888999971385899996889999999998289931252899974799987999619
No 2
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=100.00 E-value=0 Score=400.49 Aligned_cols=227 Identities=34% Similarity=0.515 Sum_probs=198.8
Q ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHH
Q ss_conf 28999489899999999999999999997289779998798646999987876307953238998132100356732027
Q gi|254780505|r 4 YKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQ 83 (234)
Q Consensus 4 ~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~ 83 (234)
+.+|+|+|.+++++++|+.|++.+++++++++.|+|+||||+||..+|+.|++..+||+||++|++|||||+++|++||+
T Consensus 3 ~~~h~~~~~~~~~~~~a~~i~~~l~~~i~~~~~~~i~lsGG~tp~~~y~~L~~~~ldw~~v~~f~~DER~v~~~~~~Sn~ 82 (232)
T 3lhi_A 3 FVWHEYENAAEAAQSLADAVADALQGALDEKGGAVLAVSGGRSPIAFFNALSQKDLDWKNVGITLADERIVPTNHADSNT 82 (232)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSSTTHHHHHHHHTSCCCGGGEEEEESEEESSCTTSTTCHH
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCHHHEEEEECCEECCCCCCHHHHH
T ss_conf 35997499999999999999999999999779989998896769999999987168815649971224415887516399
Q ss_pred HHHHHHHHCCCCCCCCEEECCCCCCCHHH--HHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEECCCCCC
Q ss_conf 88999762356776321444588789899--9999999996315877648994478877143402786410022156674
Q gi|254780505|r 84 SFISKFFLQNKAQKASFIPLYYPQKTIEE--AIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIALDTHTP 161 (234)
Q Consensus 84 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~~~~~~ 161 (234)
++++++|+++...+..++++..+.....+ +...++..+.. .++||+++||||+||||||||||++.+....+....
T Consensus 83 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Dl~lLGmG~DGHiAslFP~~~~~~~~~~~~~~ 160 (232)
T 3lhi_A 83 GLVREYLLKNKAAAAVWIPMVEDGKTETELHPDAVVDYALKH--YKQPDVLILGMGNDGHTASIFPKAPQFQTAIDGSAG 160 (232)
T ss_dssp HHHHHHTSSGGGGGSEECCSSCTTCCGGGCCHHHHHHHHHHH--CCCCSEEEECCCTTSCBTTBCTTCTTHHHHHCCTTC
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCCCCEEEECCCCCCCEEECCCCCHHHHHHHCCCCC
T ss_conf 999998604665200026655787661677899999998734--799888986477886158758997566544314540
Q ss_pred CCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEC
Q ss_conf 318995389987215870878884158299998183489999999808983206089996189996899833
Q gi|254780505|r 162 RSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLEVHWT 233 (234)
Q Consensus 162 ~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~V~W~ 233 (234)
...+...+.++|++|||||++.|++|++|+|+++|++|+++++++++|+ +.+|||++|++|+++++.|||+
T Consensus 161 ~~~~~~~~~~~p~~RiTltl~~i~~ak~i~ll~~G~~K~~~l~~~~~~~-~~~~Pas~l~~~~~~~v~v~w~ 231 (232)
T 3lhi_A 161 VALVHTTPVTAPHERISMTLDAIAHTGHVFLAIQGEEKKAVFDQAAQGE-NREYPISLVLNHQGVNCHVFYA 231 (232)
T ss_dssp CCEEEECCSSSSSCEEEECHHHHHTCSEEEEEEESHHHHHHHHHHHTSC-CTTSTHHHHHTSTTCCEEEEEE
T ss_pred EEEEEECCCCCCCEEEECCHHHHHHCCEEEEEEECHHHHHHHHHHHHCC-CCCCCHHHHHHCCCCEEEEEEC
T ss_conf 6899614788997629778999983496999997889999999997289-9556288996389986999954
No 3
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=100.00 E-value=0 Score=387.99 Aligned_cols=225 Identities=22% Similarity=0.341 Sum_probs=197.8
Q ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH--HCCCCCCEEEEECCCCCCCCCC
Q ss_conf 98728999489899999999999999999997289779998798646999987876--3079532389981321003567
Q gi|254780505|r 1 MLQYKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSI--INVDWHKVVVTLVDERFVPLEN 78 (234)
Q Consensus 1 M~~~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~--~~~~w~kv~~~~~DER~V~~~~ 78 (234)
+|+.++++|+|.+++++++|+.|++.++++|+++|+|+|+||||+||+.+|+.|+. .++||+||++|++||||||.+|
T Consensus 21 ~~~~~i~v~~~~~~l~~~~A~~i~~~i~~~i~~~g~~~i~lsGGstp~~ly~~L~~~~~~ldw~kv~~f~~DER~Vp~~~ 100 (268)
T 3ico_A 21 SMSSSIEIFPDSDILVAAAGKRLVGAIGAAVAARGQALIVLTGGGNGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDD 100 (268)
T ss_dssp ---CEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHHGGGSCGGGEEEEESEEECSCTTC
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCHHHEEEEEEEEEECCCCC
T ss_conf 76037999799999999999999999999999789889998789649999999975431598246699961137369988
Q ss_pred CCCHHHHHHHHHHCCCCCCCCEEECCC-C----CCCHHHHHHHHHHHHHHHCC-----CCCCEEEECCCCCCCEEEECCC
Q ss_conf 320278899976235677632144458-8----78989999999999963158-----7764899447887714340278
Q gi|254780505|r 79 LRSNQSFISKFFLQNKAQKASFIPLYY-P----QKTIEEAIRIANEKICQLIH-----FPFDVVVLGMGIDGHTASFFPK 148 (234)
Q Consensus 79 ~~Sn~~~~~~~ll~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~-----~~~Dl~lLGiG~DGH~ASlFP~ 148 (234)
++||+++++++|+++.+++..+++... . ..+++++++.|++.+..... ++||+++||||+||||||||||
T Consensus 101 ~~SN~~~~~~~ll~~~~i~~~~i~~~~~~~~~~~~~~~~~a~~y~~~l~~~~~~~~~~p~fDl~lLGmG~DGH~ASlFP~ 180 (268)
T 3ico_A 101 DERNLKQARRALLNHVDIPSNQVHPMAASDGDFGGDLDAAALAYEQVLAASAAPGDPAPNFDVHLLGMGPEGHINSLFPH 180 (268)
T ss_dssp TTCHHHHHHHHTGGGSCCCGGGBCCCCCTTSTTTTCHHHHHHHHHHHHHHHSSTTCSSCCCSEEEECCCTTCCBTTBCTT
T ss_pred CCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEECCCC
T ss_conf 75879999999763268837756876675445556999999999999998401236788766899756688742545899
Q ss_pred CCCCEEECCCCCCCCEEEE-CCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
Q ss_conf 6410022156674318995-389987215870878884158299998183489999999808983206089996189996
Q gi|254780505|r 149 GDTLSIALDTHTPRSVIAI-KDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSP 227 (234)
Q Consensus 149 ~~~l~~~~~~~~~~~~~~~-~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~ 227 (234)
++.+.. +.+.+... ..+++|++|||||++.|++|++|+|+++|++|+++++++++++++..+|++.|+.|.++.
T Consensus 181 ~~~l~~-----~~~~v~~~~~~p~~p~~RITltl~~i~~a~~i~ll~~G~~Ka~~l~~~l~~~~~~~~Pas~l~~~~~~~ 255 (268)
T 3ico_A 181 SPAVLE-----STRMVVAVDDSPKPPPRRITLTLPAIQRSREVWLLVSGPGKADAVAAAIGGADPVSVPAAGAVGRQNTL 255 (268)
T ss_dssp CHHHHC-----SSCSEEEESCCSSSSSCEEEECHHHHTTSSEEEEEECSGGGHHHHHHHHTTCCTTTSGGGGCCCSSEEE
T ss_pred CCCCCC-----CCCCCCCCCCCCCCCCEEEECCHHHHHCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEE
T ss_conf 832000-----444342224778999868865888996189699998188999999999818994014679873799879
Q ss_pred EEE
Q ss_conf 899
Q gi|254780505|r 228 LEV 230 (234)
Q Consensus 228 ~~V 230 (234)
+++
T Consensus 256 w~~ 258 (268)
T 3ico_A 256 WLL 258 (268)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 998
No 4
>3lwd_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.75A {Chromohalobacter salexigens}
Probab=100.00 E-value=0 Score=387.77 Aligned_cols=221 Identities=36% Similarity=0.606 Sum_probs=201.7
Q ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf 99489899999999999999999997289779998798646999987876307953238998132100356732027889
Q gi|254780505|r 7 YVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFI 86 (234)
Q Consensus 7 ~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~ 86 (234)
.++++++++++++|+.+++.+++.+++++.++|+||||+||..+|+.|++..+||+||++|++||||||.+|++||++++
T Consensus 5 ~~~e~~e~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGG~tp~~~y~~L~~~~l~w~~v~~~~~DEr~v~~~~~~Sn~~~~ 84 (226)
T 3lwd_A 5 TTQEGRQRLAERLADTVAQALEADLAKRERALLVVSGGSTPKPFFTSLAAKALPWARVDVTLADERWVTADDADSNARLV 84 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSSCEEEEECCSSTTHHHHHHHHTSCSCGGGEEEEESEEESSCTTSTTCHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCHHEEEEEEEEEECCCCCHHHHHHHH
T ss_conf 66346999999999999999999998669989997797679999999986169805626885036751689868889999
Q ss_pred HHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEECCCCCCCCEEE
Q ss_conf 99762356776321444588789899999999999631587764899447887714340278641002215667431899
Q gi|254780505|r 87 SKFFLQNKAQKASFIPLYYPQKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIALDTHTPRSVIA 166 (234)
Q Consensus 87 ~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~~~~~~~~~~~ 166 (234)
+++|+++...+..++++.....+++++++.|++.+.... ++||+++||||+||||||||||++.+....+ ....+..
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Dl~lLG~G~DGHiASlFP~~~~~~~~~~--~~~~~~~ 161 (226)
T 3lwd_A 85 RETLLVGPAAEACFHPLTTDDDTPEAGVETVAERLESLP-WPASAVILGMGGDGHTASLFPDSEQLATALE--TTSAAVV 161 (226)
T ss_dssp HHHTSSGGGGGSEEECSCCSSSSHHHHHHHHHHHHHTSC-SSBSEEEECCCTTSCBTTBCTTCTTHHHHHH--CCSSEEE
T ss_pred HHHHHCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHCC-CCCCEEEECCCCCCCEEECCCCCCCCCCCCC--CCEEEEE
T ss_conf 998724776200252365557889999999999986448-9766899757899774235899844220002--4316888
Q ss_pred ECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEC
Q ss_conf 5389987215870878884158299998183489999999808983206089996189996899833
Q gi|254780505|r 167 IKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLEVHWT 233 (234)
Q Consensus 167 ~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~V~W~ 233 (234)
...+++|++|||||++.|++|++|+|+++|++|+++++++++|+++.+|||++|+.|+ +.|||+
T Consensus 162 ~~~~~~p~~RiTltl~~i~~ak~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~l~~~~---~~v~w~ 225 (226)
T 3lwd_A 162 VHAPSVPQARITLSASRLADAGLHVLHITGNDKRRVLAEALAGDDVRQLPIRAFLSQP---IATYWA 225 (226)
T ss_dssp ECCTTSSSCEEEECHHHHTCBSCEEEEEESHHHHHHHHHHHHCCCTTTSTTHHHHTSC---CEEEEE
T ss_pred ECCCCCCCEEEECCHHHHHHHCCEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHHCCC---CEEEEC
T ss_conf 4589998868988899998533089999788999999999828995246568985799---708929
No 5
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=100.00 E-value=0 Score=375.19 Aligned_cols=226 Identities=24% Similarity=0.357 Sum_probs=199.3
Q ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH--CCCCCCEEEEECCCCCCCCCC
Q ss_conf 987289994898999999999999999999972897799987986469999878763--079532389981321003567
Q gi|254780505|r 1 MLQYKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSII--NVDWHKVVVTLVDERFVPLEN 78 (234)
Q Consensus 1 M~~~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~--~~~w~kv~~~~~DER~V~~~~ 78 (234)
|++.+|++|+|.+++++++|+.|++.++++++++|.|+|+||||+||+.+|+.|++. ++||+||++|++||||||.+|
T Consensus 5 m~~~~i~~~~d~~~l~~~~a~~i~~~i~~~i~~~~~~~l~lsGGstp~~~y~~L~~~~~~i~w~~v~~~~~DER~v~~~~ 84 (248)
T 3oc6_A 5 MSDTVIERHADTAALVAAAGDRLVDAISSAIGERGQATIVLTGGGTGIGLLKRVRERSGEIDWSKVHIYWGDERFVPQDD 84 (248)
T ss_dssp -CEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEEECCSHHHHHHHHHHHHTGGGSCGGGEEEEESEEECSCTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHEEEEECCCCCCCCCC
T ss_conf 76118998699999999999999999999998589989998288178999999988634698223589835411147556
Q ss_pred CCCHHHHHHHHHHCCCCCCCCEEECCC-----CCCCHHHHHHHHHHHHHHHC---CCCCCEEEECCCCCCCEEEECCCCC
Q ss_conf 320278899976235677632144458-----87898999999999996315---8776489944788771434027864
Q gi|254780505|r 79 LRSNQSFISKFFLQNKAQKASFIPLYY-----PQKTIEEAIRIANEKICQLI---HFPFDVVVLGMGIDGHTASFFPKGD 150 (234)
Q Consensus 79 ~~Sn~~~~~~~ll~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~Dl~lLGiG~DGH~ASlFP~~~ 150 (234)
++||+++++++|+++.+.+..+++... ...+++++++.|++.+.... .++||+++||||+|||||||||+++
T Consensus 85 ~~Sn~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~l~~~~~~~~~~~Dl~lLGmG~DGHiASlFP~~~ 164 (248)
T 3oc6_A 85 DERNDKQAREALLDHIGIPPVNVHAMAASDGEFGDDLEAAAAGYAQLLSANFDSSVPGFDVHLLGMGGEGHVNSLFPDTD 164 (248)
T ss_dssp TTCHHHHHHHHTGGGSCCCGGGBCCCCCTTSTTTTCHHHHHHHHHHHHHHHHTSSSCSEEEEEECCCTTCCBTTBCTTCH
T ss_pred CCCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEECCCCCH
T ss_conf 77779999999985328874434566676544456799999999999987622368876777614789974553589953
Q ss_pred CCEEECCCCCCCCEEEE-CCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf 10022156674318995-38998721587087888415829999818348999999980898320608999618999689
Q gi|254780505|r 151 TLSIALDTHTPRSVIAI-KDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLE 229 (234)
Q Consensus 151 ~l~~~~~~~~~~~~~~~-~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~ 229 (234)
.+. .+...++.. +.+++|++|||||++.|++|++|+|+++|++|+++++++++++++..+|+++|+.|+++.++
T Consensus 165 ~~~-----~~~~~~~~~~~~~~~p~~RITltl~~i~~ak~i~ll~~G~~K~~~l~~~l~~~~~~~~Pas~l~~~~~~~~~ 239 (248)
T 3oc6_A 165 AVR-----ETERLVVGVSDSPKPPPRRITLTLPAVQNSREVWLVVSGEAKADAVAAAVGGADPVDIPAAGAVGRERTVWL 239 (248)
T ss_dssp HHH-----CSSCSEEEESCCSSSSSCEEEECHHHHTTEEEEEEEECSGGGHHHHHHHHHTCCTTTSGGGGCCCSSEEEEE
T ss_pred HHH-----CCCCEEECCCCCCCCCCEEEECCHHHHHCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEE
T ss_conf 543-----152345324689988863886056676253879999738899999999971899401457986469987999
Q ss_pred EE
Q ss_conf 98
Q gi|254780505|r 230 VH 231 (234)
Q Consensus 230 V~ 231 (234)
+.
T Consensus 240 ~D 241 (248)
T 3oc6_A 240 VD 241 (248)
T ss_dssp EE
T ss_pred EE
T ss_conf 87
No 6
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=100.00 E-value=0 Score=369.03 Aligned_cols=231 Identities=23% Similarity=0.231 Sum_probs=199.0
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHH--HHHHCCCEEEEECCCCCHHHHHHHHH---HHCCCCCCEEEEECCCCCCCCC
Q ss_conf 728999489899999999999999999--99728977999879864699998787---6307953238998132100356
Q gi|254780505|r 3 QYKLYVAENKKRLAQKLAKKVAEQLSI--GITNKGTASIALSGGLTPRFFLEELS---IINVDWHKVVVTLVDERFVPLE 77 (234)
Q Consensus 3 ~~~i~i~~~~~~l~~~~a~~i~~~i~~--~i~~~~~~~i~lsGGstp~~~y~~L~---~~~~~w~kv~~~~~DER~V~~~ 77 (234)
+.+++.++|.+++++++|++|+..|.+ .++++++|+|+||||+||+.+|+.|+ +.++||+||++|++|||||+.+
T Consensus 26 ~~~~~~~~d~~~~~~~aa~~i~~~i~~k~~~~~~~~~vl~LsGGsTP~~~Y~~L~~~~~~~idw~kv~~f~~DEr~v~~~ 105 (312)
T 3e15_A 26 NVKYLEAKDLTDFNQKSAYYICHQIAEKQLSKEGGHVVIGLSGGKTPIDVYKNIALVKDIKIDTSKLIFFIIDERYKRDD 105 (312)
T ss_dssp TEEEEEESSHHHHHHHHHHHHHHHHHHHHHHSTTCCCEEEECCSHHHHHHHHHHTTCCSSCCCGGGCEEEESEEECCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHEEEEECEEECCCCC
T ss_conf 52589606887899999999999999878646599889996898019999999997654299915749996633067998
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCC--CCCCEEEECCCCCCCEEEECCCCCCCEE-
Q ss_conf 7320278899976235677632144458878989999999999963158--7764899447887714340278641002-
Q gi|254780505|r 78 NLRSNQSFISKFFLQNKAQKASFIPLYYPQKTIEEAIRIANEKICQLIH--FPFDVVVLGMGIDGHTASFFPKGDTLSI- 154 (234)
Q Consensus 78 ~~~Sn~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dl~lLGiG~DGH~ASlFP~~~~l~~- 154 (234)
|++||++++++.|+...+.+..+++.+....++++++++|++.+..... ++||+++||||+||||||||||++....
T Consensus 106 ~~~Sn~~m~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~i~~~i~~~g~iDl~lLGiG~DGHiAsnfPg~~~~~~~ 185 (312)
T 3e15_A 106 HKFSNYNNIKFLFESLKINEKEQLYRPDTSKNIVECVRDYNEKIKNMVKKYTKVDIAILGMGSDFHIASLFPNIFFNIYM 185 (312)
T ss_dssp CTTCHHHHHHHHHHHTTCCHHHHEECCCTTSCHHHHHHHHHHHHHHHHHHHCSCCEEEECCCTTSCBTTBCSSHHHHHHH
T ss_pred CCHHHHHHHHHHHHCCCCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEECCCCCCCCCCC
T ss_conf 73404999999864557766774544787779999999976667876413787018986577887346437997311113
Q ss_pred --------------------------ECCCCCCCCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHC
Q ss_conf --------------------------215667431899538998721587087888415829999818348999999980
Q gi|254780505|r 155 --------------------------ALDTHTPRSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAIS 208 (234)
Q Consensus 155 --------------------------~~~~~~~~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~ 208 (234)
..+......+.....+.+|++|||||++.|++|++|+|+++|++|+++|+++++
T Consensus 186 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~rITlgl~~I~~Ak~Iilla~G~~Ka~~v~~~l~ 265 (312)
T 3e15_A 186 NNYQNSYIYDESSIKVANSNDTSDNDNLDLLKEYVYFTTTNNFDVRKRITVSLDLLGNASSKIFLLNSTDKLDLWKNMLL 265 (312)
T ss_dssp HHTGGGSSSCGGGCCCCC---CCHHHHHTTCCCSEEEEECCSTTCSEEEEECHHHHHTCSEEEEEECSHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCEEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEECCHHHHHHCCEEEEEEECHHHHHHHHHHHH
T ss_conf 32322112343233652155543023332202623403688889950497388999840928999818899999999983
Q ss_pred CCCCC----CCCHHHHHHCCCCCEEEEEC
Q ss_conf 89832----06089996189996899833
Q gi|254780505|r 209 GDDAL----EMPIRAILWNAQSPLEVHWT 233 (234)
Q Consensus 209 ~~~~~----~~Pas~ll~~~~~~~~V~W~ 233 (234)
|+.++ .||||+|+.|+++++..-|.
T Consensus 266 g~~s~~~~~~~PAS~L~~h~n~tvi~~~~ 294 (312)
T 3e15_A 266 KSYVDVNYCLYPAVYLIDSMNTTVVTCGY 294 (312)
T ss_dssp HTTTTCCTTTCHHHHHHHTSCEEEEEESC
T ss_pred CCCCCCCCCCCCHHHHHHCCCEEEEECCC
T ss_conf 89998775667759972188859998263
No 7
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=100.00 E-value=0 Score=371.25 Aligned_cols=215 Identities=23% Similarity=0.315 Sum_probs=191.8
Q ss_pred EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHH
Q ss_conf 89994898999999999999999999972897799987986469999878763079532389981321003567320278
Q gi|254780505|r 5 KLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQS 84 (234)
Q Consensus 5 ~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~ 84 (234)
+..+|++++++.+.+++.+.+.++++++++++++|+||||+||..+|+.|++..++|+||++|++||||||.+|++||++
T Consensus 15 ~~~i~~~~~~~~~~~a~~i~~~i~~~l~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~~v~~~~~DER~V~~~~~~Sn~~ 94 (232)
T 1vl1_A 15 KTVIYLLEDGYVDFVVEKIRTKMEKLLEEKDKIFVVLAGGRTPLPVYEKLAEQKFPWNRIHFFLSDERYVPLDSDQSNFR 94 (232)
T ss_dssp CEEEEEESSCHHHHHHHHHHHHHHHHHHHCSCEEEEECCSTTHHHHHHHHTTSCCCGGGEEEEESEEESSCTTSTTCHHH
T ss_pred EEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCHHHEEEEECCEEECCCCCCCCHHH
T ss_conf 58999788999999999999999999987799899989982499999999855998133699946467238887402588
Q ss_pred HHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEECCCCCCCCE
Q ss_conf 89997623567763214445887898999999999996315877648994478877143402786410022156674318
Q gi|254780505|r 85 FISKFFLQNKAQKASFIPLYYPQKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIALDTHTPRSV 164 (234)
Q Consensus 85 ~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~~~~~~~~~ 164 (234)
+++++|+++.+.+..+++.++...+++++++.|++.+.... ++||+++||||+|||||||||+++... +..+
T Consensus 95 ~~~~~L~~~~~i~~~~i~~~~~~~~~~~~~~~y~~~i~~~~-~~~Dl~lLGmG~DGHiASlFp~~~~~~-------~~~~ 166 (232)
T 1vl1_A 95 NINEVLFSRAKIPSGNVHYVDTSLPIEKACEKYEREIRSAT-DQFDLAILGMGPDGHVASIFDLETGNK-------DNLV 166 (232)
T ss_dssp HHHHHTTTTSCCCGGGEECCCTTSCHHHHHHHHHHHHHHHC-SSCSEEEECCCTTSCBTTBCSHHHHTC-------SSSE
T ss_pred HHHHHHHCCCCCCHHHEECCCCCCCHHHHHHHHHHHHHHCC-CCCCEEEECCCCCCEEEECCCCCCCCC-------CCCE
T ss_conf 99999745565657654437778999999999999998638-865388626899860341479964331-------0233
Q ss_pred EEEC-CCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 9953-89987215870878884158299998183489999999808983206089996189996899
Q gi|254780505|r 165 IAIK-DYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLEV 230 (234)
Q Consensus 165 ~~~~-~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~V 230 (234)
.... .+.+|++|||||++.|++|++|+|+++|++|+++++++++++ .|||++|+.|.++.++|
T Consensus 167 ~~~~~~~~p~~~RiTltl~~I~~ak~i~ll~~G~~K~~~l~~~~~~~---~~Pas~l~~~~~~~~~~ 230 (232)
T 1vl1_A 167 TFTDPSGDPKVPRVTLTFRALNTSLYVLFLIRGKEKINRLTEILKDT---PLPAYFVRGKEKTVWFV 230 (232)
T ss_dssp EECSSBTTTTBCEEEECHHHHTTCSEEEEEEESHHHHHHHHHHHTTC---CCGGGGCCCSSEEEEEE
T ss_pred EECCCCCCCCCCEEECCHHHHHHHCEEEEEECCHHHHHHHHHHHCCC---CCCHHHHCCCCCEEEEE
T ss_conf 52268999997825288999972296999981889999999996099---98868856699879997
No 8
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str}
Probab=100.00 E-value=0 Score=365.61 Aligned_cols=214 Identities=21% Similarity=0.296 Sum_probs=188.3
Q ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH----CCCCCCEEEEECCCCCCCC
Q ss_conf 987289994898999999999999999999972897799987986469999878763----0795323899813210035
Q gi|254780505|r 1 MLQYKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSII----NVDWHKVVVTLVDERFVPL 76 (234)
Q Consensus 1 M~~~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~----~~~w~kv~~~~~DER~V~~ 76 (234)
||++ ++|+|.+++++++|+.|.+. +++++.++|+||||+||+.+|+.|++. ++||+||+||++||||||.
T Consensus 1 m~n~--~if~~~~~~~~~~a~~i~~~----~~~~~~~~i~lsGG~tp~~~y~~L~~~~~~~~l~w~~v~~f~~DER~V~~ 74 (238)
T 1y89_A 1 MINH--KIFPTADAVVKSLADDMLAY----SQQGQPVHISLSGGSTPKMLFKLLASQPYANDIQWKNLHFWWGDERCVAP 74 (238)
T ss_dssp CEEE--EEESSHHHHHHHHHHHHHHH----HTTSSCEEEEECCSHHHHHHHHHHTSTTHHHHSCGGGEEEEESEEESSCT
T ss_pred CCCE--EEECCHHHHHHHHHHHHHHH----HHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECEEECCCC
T ss_conf 9843--88199999999999999999----98589889997799679999999986552248981576999551445587
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCC-----CCCCEEEECCCCCCCEEEECCCCCC
Q ss_conf 67320278899976235677632144458878989999999999963158-----7764899447887714340278641
Q gi|254780505|r 77 ENLRSNQSFISKFFLQNKAQKASFIPLYYPQKTIEEAIRIANEKICQLIH-----FPFDVVVLGMGIDGHTASFFPKGDT 151 (234)
Q Consensus 77 ~~~~Sn~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~Dl~lLGiG~DGH~ASlFP~~~~ 151 (234)
+|++||+++++++|+++.+.+..+++.+.+..+++++++.|++.+.+... ++||+++||||+||||||||||++.
T Consensus 75 ~~~~Sn~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~lLG~G~DGHiASlfP~~~~ 154 (238)
T 1y89_A 75 DDAESNYGEANALLFSKINMPAQNIHRILGENEPQAEAERFAQAMAHVIPTENGTPVFDWILLGVGADGHTASLFPGQTD 154 (238)
T ss_dssp TSTTCHHHHHHHHTGGGSCCCGGGBCCCCTTSCHHHHHHHHHHHHHHHSCEETTEECCSEEEECCCTTSCBTTBCTTTCC
T ss_pred CCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEECCCCCCH
T ss_conf 66655687774410122356521043567778989999999999998645521799777688614688853634799810
Q ss_pred CEEECCCCCCCCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCC-CCCHHHHHHCCCC
Q ss_conf 00221566743189953899872158708788841582999981834899999998089832-0608999618999
Q gi|254780505|r 152 LSIALDTHTPRSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDAL-EMPIRAILWNAQS 226 (234)
Q Consensus 152 l~~~~~~~~~~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~-~~Pas~ll~~~~~ 226 (234)
+. ....++....+++|++|||||++.|++|++|+|+++|++|++++++++.++.+. .+||++++.+.+.
T Consensus 155 ~~------~~~~~~~~~~p~~p~~RiTlt~~~i~~a~~i~~~~~G~~K~~~~~~~~~~~~~~~~~Pa~~l~~~~~~ 224 (238)
T 1y89_A 155 YA------DANLSVVASHPESGQLRVSKTAKVLQAAKRISYLVLGAGKAEIVEQIHTTPAEQLPYPAAKIHSTSGV 224 (238)
T ss_dssp TT------CCSSEEEEECTTTCCEEEEECHHHHHHSSEEEEEECSGGGHHHHHHHHHSCGGGCCCHHHHCCCSSSE
T ss_pred HC------CCCEEEEECCCCCCCCCCCCCHHHHHHHCEEEEEEECHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCC
T ss_conf 02------47515870599998340047789998409689998485899999999838999887587885469996
No 9
>3css_A 6-phosphogluconolactonase; structural genomics, medical structural genomics of pathogenic protozoa consortium, SGPP, leishmaniasis; 1.70A {Leishmania braziliensismhom} PDB: 3ch7_A
Probab=100.00 E-value=0 Score=365.95 Aligned_cols=226 Identities=21% Similarity=0.298 Sum_probs=190.7
Q ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHC---CCCCCEEEEECCCCCCCCCC
Q ss_conf 872899948989999999999999999999728977999879864699998787630---79532389981321003567
Q gi|254780505|r 2 LQYKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIIN---VDWHKVVVTLVDERFVPLEN 78 (234)
Q Consensus 2 ~~~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~---~~w~kv~~~~~DER~V~~~~ 78 (234)
|..+|+|++|+++|++++++.|++.|++.+++++.++|+||||+||..+|+.|++.. ++|+||+||++|||||+.+|
T Consensus 4 ~~p~v~i~~d~~~l~~~aa~~i~~~i~~~~~~~~~~~l~lsGG~tp~~~y~~L~~~~~~~~~w~~v~~~~~DER~V~~~~ 83 (267)
T 3css_A 4 FAPTVKICENLSQMSFAAREVILAAIDARVDKSVPVVLALSGGSTPKRLYEELHEKDLALLQQHAVQFILGDERLLSEDD 83 (267)
T ss_dssp CCCEEEECSSHHHHHHHHHHHHHHHHHTCSSTTSCEEEEECCSSTTHHHHHHHHHHSHHHHHTTCEEEEESEEESSCTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCEECCCCCC
T ss_conf 89807996999999999999999999999971899899978977899999999650503465426999976062468875
Q ss_pred CCCHHHHHHHHHHCCCCCCCCEEECC------------CCCCCHHHHHHHHHHHHHHHCC-----------CCCCEEEEC
Q ss_conf 32027889997623567763214445------------8878989999999999963158-----------776489944
Q gi|254780505|r 79 LRSNQSFISKFFLQNKAQKASFIPLY------------YPQKTIEEAIRIANEKICQLIH-----------FPFDVVVLG 135 (234)
Q Consensus 79 ~~Sn~~~~~~~ll~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~-----------~~~Dl~lLG 135 (234)
++||+++++++|+++++.. +++++. ....+++++++.|++.+.+... ++||+++||
T Consensus 84 ~~Sn~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~y~~~l~~~~~~~~~~~~~~~~~~~Dl~lLG 162 (267)
T 3css_A 84 EQSNFSMATKALLRDVPSS-DVISIDRRAALATSKDEKGGLDGAWAVAQDYEVKLLNCLPCKQINGTAKSVPVVDIVLLG 162 (267)
T ss_dssp TTSHHHHHHHHTGGGSCGG-GBCCCCCHHHHTTTTCTTTTHHHHHHHHHHHHHHHHHHSCEEECTTSSCEEECCSEEEEE
T ss_pred HHHHHHHHHHHHHHCCCHH-HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
T ss_conf 2648999999987149586-535666433333356545554479999999999998750023332013558876679726
Q ss_pred CCCCCCEEEECCCCCCCEEECCCCCCCCEEE-EC--CCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCC
Q ss_conf 7887714340278641002215667431899-53--89987215870878884158299998183489999999808983
Q gi|254780505|r 136 MGIDGHTASFFPKGDTLSIALDTHTPRSVIA-IK--DYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDA 212 (234)
Q Consensus 136 iG~DGH~ASlFP~~~~l~~~~~~~~~~~~~~-~~--~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~ 212 (234)
||+||||||||||++.+.. +...+.. .. .+++|.+|||||++.|++|++|+|+++|++|+++|+++++++++
T Consensus 163 ~G~DGHiAslfP~~~~~~~-----~~~~~~~~~~~~~~~p~~~RiTlt~~~i~~a~~i~l~~~G~~K~~~l~~~l~~~~~ 237 (267)
T 3css_A 163 FGSDGHTASIFPDSVAATD-----EEHVVSVSFPSPTMSPKVWRVTLSKTVIQYAKHVVVLAAGKDKNWVVRGVLSESPT 237 (267)
T ss_dssp CCTTSCBTTBCTTSGGGGC-----CSCSEEEECCCTTCSSCSCEEEECHHHHHHCSEEEEEECSGGGHHHHHHHHCSSCC
T ss_pred CCCCCCEEECCCCCCCCCC-----CCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCC
T ss_conf 7898703652699733344-----52114430467778999131760446003556799997688999999999828997
Q ss_pred CCCCHHHHHHCCCCCEEEEEC
Q ss_conf 206089996189996899833
Q gi|254780505|r 213 LEMPIRAILWNAQSPLEVHWT 233 (234)
Q Consensus 213 ~~~Pas~ll~~~~~~~~V~W~ 233 (234)
.++|++.++++.+..+.+||-
T Consensus 238 ~~~P~s~ll~~~~~~~~~~lD 258 (267)
T 3css_A 238 DPLPVSRFLRDCRGSVTLLLD 258 (267)
T ss_dssp SSCCGGGGGGGCSSEEEEEEC
T ss_pred CCCCHHHHHHCCCCCEEEEEE
T ss_conf 667877996278998899985
No 10
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME disease, non-hodgkin lymphomas; 2.20A {Borrelia burgdorferi B31}
Probab=100.00 E-value=0 Score=358.08 Aligned_cols=227 Identities=18% Similarity=0.200 Sum_probs=192.0
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCC-CEEEEECCCCCHHHHHHHHHHH----CCCCCCEEEEECCCCC-CCC
Q ss_conf 728999489899999999999999999997289-7799987986469999878763----0795323899813210-035
Q gi|254780505|r 3 QYKLYVAENKKRLAQKLAKKVAEQLSIGITNKG-TASIALSGGLTPRFFLEELSII----NVDWHKVVVTLVDERF-VPL 76 (234)
Q Consensus 3 ~~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~-~~~i~lsGGstp~~~y~~L~~~----~~~w~kv~~~~~DER~-V~~ 76 (234)
.+||+|++|++++++.+|++|++.|++.+.+++ .++|+||||+||+.+|+.|++. .+||+||+||++|||| ||.
T Consensus 21 ~Mkiii~~~~~el~~~aA~~i~~~I~~~~~~~~~~~~iaLsgG~TP~~~y~~L~~~~~~~~idw~~v~~f~~DEr~~v~~ 100 (289)
T 3hn6_A 21 SMRLIIRPTYEDISKWAANHVAQKINEFSPTKENPFILGLPTGSSPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEE 100 (289)
T ss_dssp SCEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSCCT
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCEECCCCC
T ss_conf 63799969999999999999999999877503898599979984899999999988752699867979994735426898
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCCEEECCC-CCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEE
Q ss_conf 67320278899976235677632144458-87898999999999996315877648994478877143402786410022
Q gi|254780505|r 77 ENLRSNQSFISKFFLQNKAQKASFIPLYY-PQKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIA 155 (234)
Q Consensus 77 ~~~~Sn~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~ 155 (234)
++++||+++++++|++++..+..+++.+. ...+++++++.|++.+... ++||+++||||+|||||||||+++.....
T Consensus 101 ~~~~S~~~~~~~~l~~~~~i~~~~i~~~~~~~~~~~~~~~~~~~~i~~~--~~~Dl~lLG~G~DGHiAslfP~~~~~~~~ 178 (289)
T 3hn6_A 101 NHPESYHSFMWNNFFSHIDIKKENINILNGNASNLKKECEEYEKKIKSF--GGIMLFVGGIGPDGHIAFNEPGSSLTSRT 178 (289)
T ss_dssp TSTTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHT--TSCSEEEEECCTTSCBTTBCTTCCTTCCS
T ss_pred CCHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHHHC--CCCCEEEECCCCCCCEEECCCCCCCCCCC
T ss_conf 8503199999998653467638764046766689999999999987555--97408994377888456336798666654
Q ss_pred ----CCCCCC---CCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCE
Q ss_conf ----156674---3189953899872158708788841582999981834899999998089832060899961899968
Q gi|254780505|r 156 ----LDTHTP---RSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPL 228 (234)
Q Consensus 156 ----~~~~~~---~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~ 228 (234)
.+..+. ..+.....+++|++|||||++.|++|++|+|+++|++|+++++++++|+.+.++|||+|+.|+++.+
T Consensus 179 ~~v~~~~~~~~~~~~~~~~~~~~~P~~rITlt~~~I~~Ak~I~llv~G~~Ka~~l~~~l~g~~~~~~PaS~l~~h~~~~~ 258 (289)
T 3hn6_A 179 RIKTLTQDTIIANSRFFEGDVNKVPKNALTVGIGTIMDSQEVLIIVNGHNKARALKHAIEKGVNHMWTISALQLHKNAII 258 (289)
T ss_dssp EEEECCHHHHHHHGGGTTTCTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEE
T ss_pred EEEECCCHHHHHHHHCCCCCCCCCCCEEECCCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEE
T ss_conf 04641510487753114678788997403068999950666999972858999999998389988778699713998799
Q ss_pred EEE
Q ss_conf 998
Q gi|254780505|r 229 EVH 231 (234)
Q Consensus 229 ~V~ 231 (234)
++.
T Consensus 259 ~lD 261 (289)
T 3hn6_A 259 VSD 261 (289)
T ss_dssp EEE
T ss_pred EEE
T ss_conf 983
No 11
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=100.00 E-value=0 Score=356.62 Aligned_cols=227 Identities=20% Similarity=0.274 Sum_probs=182.0
Q ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH----CCCCCCEEEEECCCCCCCCC
Q ss_conf 87289994898999999999999999999972897799987986469999878763----07953238998132100356
Q gi|254780505|r 2 LQYKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSII----NVDWHKVVVTLVDERFVPLE 77 (234)
Q Consensus 2 ~~~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~----~~~w~kv~~~~~DER~V~~~ 77 (234)
|..+|+|++|++++++++|+.+++.+++++++++.|+|+||||+||+.+|+.|++. .++|++|+||++||||||.+
T Consensus 3 ~~~~~~v~~~~~el~~~~a~~i~~~i~~~~~~~~~~~i~lsGG~tp~~~y~~L~~~~~~~~~~~~~v~~~~~DER~V~~~ 82 (266)
T 3eb9_A 3 FKPTISVHATPQELSAAGCRKIVEIIEASGSQQWPLSIALAGGSTPKMTYARLHDEHLNLLREKRALRFFMGDERMVPAD 82 (266)
T ss_dssp CCCEEEEESSHHHHHHHHHHHHHHHHHHHCGGGCSEEEEECCSHHHHHHHHHHHHHHHHHHTTSCCEEEEESEEESSCTT
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEECCCCC
T ss_conf 99889998999999999999999999999986899899982878899999999864030166524289996534535866
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCEEECCCCC---------CCHHHHHHHHHHHHHHHCC-----------CCCCEEEECCC
Q ss_conf 732027889997623567763214445887---------8989999999999963158-----------77648994478
Q gi|254780505|r 78 NLRSNQSFISKFFLQNKAQKASFIPLYYPQ---------KTIEEAIRIANEKICQLIH-----------FPFDVVVLGMG 137 (234)
Q Consensus 78 ~~~Sn~~~~~~~ll~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-----------~~~Dl~lLGiG 137 (234)
|++||+++++++|+++.+.. ..+++.... .++...++.|++.+..... ++||+++||||
T Consensus 83 ~~~SN~~~~~~~ll~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~y~~~l~~~~~~~~~~~~~~~~p~fDl~lLGmG 161 (266)
T 3eb9_A 83 STDSNYNMAREVLLHDIPDD-LVFPFDTSAVTPSAEATSADAMRVAEAYGKQLASLLPLKSVGEAGPKVPVFDVVLLGLG 161 (266)
T ss_dssp STTCHHHHHHHHTGGGSCGG-GEECCCCTTCCTTSCCCHHHHHHHHHHHHHHHHHHSCEEETTTTSCEEECCSEEEECCC
T ss_pred CCCCHHHHHHHHHHHCCCHH-HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCC
T ss_conf 34128999999987238375-31778766678630013001999999999999975012222220156887768997467
Q ss_pred CCCCEEEECCCCCCCEEECCCCCCCCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCH
Q ss_conf 87714340278641002215667431899538998721587087888415829999818348999999980898320608
Q gi|254780505|r 138 IDGHTASFFPKGDTLSIALDTHTPRSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPI 217 (234)
Q Consensus 138 ~DGH~ASlFP~~~~l~~~~~~~~~~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pa 217 (234)
+||||||||||++.+.................+++|++|||||++.|++|++|+|+++|++|+++++++++++.+..+|+
T Consensus 162 ~DGHiASlFP~~~~~~~~~~~~~~~~~~~~~~~~~p~~RITlt~~~i~~a~~i~ll~~G~~K~~~l~~~~~~~~~~~p~a 241 (266)
T 3eb9_A 162 SDGHTASIFPGSQAEKETDGKVVVSVGFPSETMKPKVWRVTLSPATIMQARNVIVLATGAEKKWVVDGILADTAHKAPVA 241 (266)
T ss_dssp TTSCBTTBCTTCSGGGCCSSSCSEEEECCCTTCSSCSCEEEECHHHHHTCSEEEEEECCGGGHHHHHHHHCSSCSSCCGG
T ss_pred CCCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCHH
T ss_conf 88625654899811011233102111056678899960888889999606839999818899999999983898677838
Q ss_pred HHHHHCCCCCEEE
Q ss_conf 9996189996899
Q gi|254780505|r 218 RAILWNAQSPLEV 230 (234)
Q Consensus 218 s~ll~~~~~~~~V 230 (234)
+.+ +..+.++.+
T Consensus 242 ~~l-~~~~~~~~~ 253 (266)
T 3eb9_A 242 RFL-RGCEGNVSF 253 (266)
T ss_dssp GGG-GGCSSEEEE
T ss_pred HHH-CCCCCCEEE
T ss_conf 885-378996899
No 12
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase, multiple conformers; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=100.00 E-value=0 Score=351.04 Aligned_cols=226 Identities=21% Similarity=0.223 Sum_probs=189.9
Q ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEECCCCCHHHHHHHHHHH----CCCCCCEEEEECCCCC-CCCC
Q ss_conf 2899948989999999999999999999728-97799987986469999878763----0795323899813210-0356
Q gi|254780505|r 4 YKLYVAENKKRLAQKLAKKVAEQLSIGITNK-GTASIALSGGLTPRFFLEELSII----NVDWHKVVVTLVDERF-VPLE 77 (234)
Q Consensus 4 ~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~-~~~~i~lsGGstp~~~y~~L~~~----~~~w~kv~~~~~DER~-V~~~ 77 (234)
+||++++|.+++++.+|++|++.|++...++ ..|+|+||||+||..+|+.|.+. +++|+||+||++|||+ ||.+
T Consensus 1 M~iii~~~~ee~~~~aA~~i~~~I~~~~~~~~~~~~i~lsgGstP~~~y~~L~~~~~~~~i~w~~v~~f~~DEr~~v~~~ 80 (266)
T 1fs5_A 1 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKE 80 (266)
T ss_dssp CEEEECSSHHHHHHHHHHHHHHHHHHHCCCSSSCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSCCTT
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCCCCC
T ss_conf 94899599999999999999999997353568977999899955999999999888615998446799969635168999
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEE-
Q ss_conf 73202788999762356776321444588-7898999999999996315877648994478877143402786410022-
Q gi|254780505|r 78 NLRSNQSFISKFFLQNKAQKASFIPLYYP-QKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIA- 155 (234)
Q Consensus 78 ~~~Sn~~~~~~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~- 155 (234)
|++||+++++++|++++..+..+++.+.. ..+++++++.|.+.+.+. ++||+++||||+||||||||||++.....
T Consensus 81 ~~~Sn~~~~~~~l~~~l~i~~~~i~~~~~~~~d~~~~~~~~~~~i~~~--~~~Dl~lLG~G~DGHiAs~fP~~~~~~~~~ 158 (266)
T 1fs5_A 81 HPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSY--GKIHLFMGGVGNDGHIAFNEPASSLASRTR 158 (266)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHH--CCCSEEEECCCTTCCSTTCCSSCCTTCCSE
T ss_pred CHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCCEEEECCCCCCCCCCCE
T ss_conf 556399999998652357789991268875479999999999997642--895199943778864774478985556512
Q ss_pred ---CCCCC---CCCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf ---15667---431899538998721587087888415829999818348999999980898320608999618999689
Q gi|254780505|r 156 ---LDTHT---PRSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLE 229 (234)
Q Consensus 156 ---~~~~~---~~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~ 229 (234)
+.... .........+..|.+|||||++.|++|++|+|+++|++|++|++++++|+.+..+|||.|+.|+++.++
T Consensus 159 ~v~l~~~~~~~~~~~~~~~~~~~P~~riTl~l~~i~~Ak~i~llv~G~~Ka~al~~~l~g~~~~~~PaS~L~~h~~~~~~ 238 (266)
T 1fs5_A 159 IKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMV 238 (266)
T ss_dssp EEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHSCCCSSSGGGGGGGCSSEEEE
T ss_pred EEECCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCEEEEEEECHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEE
T ss_conf 68646688988776327887779960130589999625879999728789999999983899887786997249987999
Q ss_pred EE
Q ss_conf 98
Q gi|254780505|r 230 VH 231 (234)
Q Consensus 230 V~ 231 (234)
+.
T Consensus 239 lD 240 (266)
T 1fs5_A 239 CD 240 (266)
T ss_dssp EC
T ss_pred EE
T ss_conf 71
No 13
>1ne7_A Glucosamine-6-phosphate isomerase; V-type like allosteric enzyme, conformational disorder, conformational differences, hydrolase; HET: GLC 16G AGP; 1.75A {Homo sapiens} SCOP: c.124.1.1
Probab=100.00 E-value=0 Score=350.68 Aligned_cols=226 Identities=19% Similarity=0.159 Sum_probs=189.5
Q ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHH-HHCCCEEEEECCCCCHHHHHHHHHHH----CCCCCCEEEEECCCCC-CCCC
Q ss_conf 2899948989999999999999999999-72897799987986469999878763----0795323899813210-0356
Q gi|254780505|r 4 YKLYVAENKKRLAQKLAKKVAEQLSIGI-TNKGTASIALSGGLTPRFFLEELSII----NVDWHKVVVTLVDERF-VPLE 77 (234)
Q Consensus 4 ~~i~i~~~~~~l~~~~a~~i~~~i~~~i-~~~~~~~i~lsGGstp~~~y~~L~~~----~~~w~kv~~~~~DER~-V~~~ 77 (234)
+||+|++|.+++++.+|+.|++.|.+.. ++++.++|+||||+||..+|+.|++. .++|++|+||++|||+ ||.+
T Consensus 1 Mkiii~~d~~els~~aA~~i~~~I~~~~~~~~~~~~i~lsGGstP~~~y~~L~~~~~~~~i~w~~v~~f~~DEr~~v~~d 80 (289)
T 1ne7_A 1 MKLIILEHYSQASEWAAKYIRNRIIQFNPGPEKYFTLGLPTGSTPLGCYKKLIEYYKNGDLSFKYVKTFNMDEYVGLPRD 80 (289)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSHHHHHHHHHHHHHHHTTSCCCTTEEEEESEEETTSCTT
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCC
T ss_conf 93999799999999999999999997342668988999799868999999999998637998789599943473478888
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEEC
Q ss_conf 73202788999762356776321444588-78989999999999963158776489944788771434027864100221
Q gi|254780505|r 78 NLRSNQSFISKFFLQNKAQKASFIPLYYP-QKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIAL 156 (234)
Q Consensus 78 ~~~Sn~~~~~~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~ 156 (234)
|++||+.++++.|++++..+..+++.+.. ..++++++..|++.+... ++||+++||||+||||||||||++......
T Consensus 81 ~~~Sn~~~l~~~ll~~l~i~~~ni~~~~~~~~d~~~~~~~~~~~i~~~--~~~Dl~lLG~G~DGHiAs~fPg~~~~~~~~ 158 (289)
T 1ne7_A 81 HPESYHSFMWNNFFKHIDIHPENTHILDGNAVDLQAECDAFEEKIKAA--GGIELFVGGIGPDGHIAFNEPGSSLVSRTR 158 (289)
T ss_dssp STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHT--TSCSEEEECCCTTCCSTTCCTTCCTTCCSE
T ss_pred CHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHHC--CCCCEEEECCCCCCEEEECCCCCCCCCCCE
T ss_conf 502199999999760154318665125688899999999999998537--973289843778853563478985322340
Q ss_pred ----CCCC---CCCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf ----5667---431899538998721587087888415829999818348999999980898320608999618999689
Q gi|254780505|r 157 ----DTHT---PRSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLE 229 (234)
Q Consensus 157 ----~~~~---~~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~ 229 (234)
+..+ .........+.+|++|||||++.|++|++|+|+|+|++|+++|+++++|+++.++|||+|+.|+++.++
T Consensus 159 ~~~~~~~t~~~~~~~~~~~~~~~P~~rITlg~~~I~~Ak~iilla~G~~Ka~av~~~l~~~~~~~~PaS~l~~h~~~~~~ 238 (289)
T 1ne7_A 159 VKTLAMDTILANARFFDGELTKVPTMALTVGVGTVMDAREVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTVFV 238 (289)
T ss_dssp EEECCHHHHHHHGGGTTTCGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGCSSEEEE
T ss_pred EEECCCHHHHHHHHHCCCCCCCCCCEEEECCHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEE
T ss_conf 47505124777777505777789955762589999546618999768789999999981899887373887249988999
Q ss_pred EE
Q ss_conf 98
Q gi|254780505|r 230 VH 231 (234)
Q Consensus 230 V~ 231 (234)
+.
T Consensus 239 ~D 240 (289)
T 1ne7_A 239 CD 240 (289)
T ss_dssp EE
T ss_pred EE
T ss_conf 87
No 14
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=100.00 E-value=0 Score=339.85 Aligned_cols=222 Identities=19% Similarity=0.239 Sum_probs=184.6
Q ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH----HCCCCCCEEEEECCCCC-CCCCC
Q ss_conf 28999489899999999999999999997289779998798646999987876----30795323899813210-03567
Q gi|254780505|r 4 YKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSI----INVDWHKVVVTLVDERF-VPLEN 78 (234)
Q Consensus 4 ~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~----~~~~w~kv~~~~~DER~-V~~~~ 78 (234)
+||++++|++++++.+|+.+.+.| +++++++|+||||+||..+|+.|.+ ..++|+||+||++|||| ||.++
T Consensus 1 Mkii~~~~~~e~~~~~a~~i~~~i----~~~~~~~i~lsgG~tP~~~y~~L~~~~~~~~i~w~~v~~~~~DEr~~~~~~~ 76 (242)
T 2bkx_A 1 MKVMECQTYEELSQIAARITADTI----KEKPDAVLGLATGGTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSDD 76 (242)
T ss_dssp CEEEEESSHHHHHHHHHHHHHHHH----HHCTTCEEEECCSSTTHHHHHHHHHHHHHSCCCCTTCEEEESEEETTCCTTS
T ss_pred CEEEEECCHHHHHHHHHHHHHHHH----HHCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHEEEEECEEECCCCCCC
T ss_conf 948997999999999999999999----9788989997985409999999998762268874677999565860799886
Q ss_pred CCCHHHHHHHHHHCCCCCCCCEEECCC-CCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEE---
Q ss_conf 320278899976235677632144458-8789899999999999631587764899447887714340278641002---
Q gi|254780505|r 79 LRSNQSFISKFFLQNKAQKASFIPLYY-PQKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSI--- 154 (234)
Q Consensus 79 ~~Sn~~~~~~~ll~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~--- 154 (234)
++||+.++++.|+++...+..+++++. ...+++++++.|++.+... ++||+++||||+||||||||||++..+.
T Consensus 77 ~~s~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~Dl~lLG~G~DGH~AslfPg~~~~~~~~~ 154 (242)
T 2bkx_A 77 PNSYHFYMNDRFFQHIDSKPSRHFIPNGNADDLEAECRRYEQLVDSL--GDTDIQLLGIGRNGHIGFNEPGTSFKSRTHV 154 (242)
T ss_dssp TTSHHHHHHHHTGGGSCCCGGGEECCCTTCSCHHHHHHHHHHHHHHT--TSCSEEEECCCTTSCBTTBCTTCCTTCCSEE
T ss_pred CHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC--CCCCEEEEECCCCCCEEECCCCCCCCCCCCE
T ss_conf 04399999973202877587503577776457899999999988535--7977799713788843424689743345623
Q ss_pred -ECCCCCCCC--EEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf -215667431--89953899872158708788841582999981834899999998089832060899961899968998
Q gi|254780505|r 155 -ALDTHTPRS--VIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLEVH 231 (234)
Q Consensus 155 -~~~~~~~~~--~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~V~ 231 (234)
.+...+... ........+|++|||||++.|++||+|+|+++|++|+++++++++|+.+..+||++|+.|+++.+++.
T Consensus 155 v~l~~~~~~~~~~~~~~~~~~p~~riTlt~~~i~~ak~iil~~~G~~K~~~l~~~l~~~~~~~~Pas~l~~h~~~~~~~D 234 (242)
T 2bkx_A 155 VTLNEQTRQANARYFPSIDSVPKKALTMGIQTILSSKRILLLISGKSKAEAVRKLLEGNISEDFPASALHLHSDVTVLID 234 (242)
T ss_dssp EECCHHHHHHHGGGSSSGGGSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHHTCCCTTSGGGGGGGCSSEEEEEE
T ss_pred EECCCHHHHHHHHCCCCCCCCCCEEEECCHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEE
T ss_conf 54371457764211788677874246279999948861799976879999999998289986474798645988899972
No 15
>2ri0_A Glucosamine-6-phosphate deaminase; carbohydrate metabolism, hydrolase; HET: BTB; 1.60A {Streptococcus mutans} PDB: 2ri1_A*
Probab=100.00 E-value=0 Score=334.14 Aligned_cols=220 Identities=19% Similarity=0.276 Sum_probs=180.9
Q ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC-CCCCCCCC
Q ss_conf 72899948989999999999999999999728977999879864699998787630795323899813210-03567320
Q gi|254780505|r 3 QYKLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERF-VPLENLRS 81 (234)
Q Consensus 3 ~~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~-V~~~~~~S 81 (234)
++||++++|.+++++.+++.+.+.++ ++.++|+||||+||..+|+.|.+..+||++|++|++|||+ ||.+|++|
T Consensus 1 ~mkii~~~~~~e~~~~a~~~~~~~i~-----~~~~~l~LsgG~tp~~~y~~L~~~~idw~~v~~~~~DE~~~v~~~~~~s 75 (234)
T 2ri0_A 1 SMKTIKVKNKTEGSKVAFRMLEEEIT-----FGAKTLGLATGSTPLELYKEIRESHLDFSDMVSINLDEYVGLSADDKQS 75 (234)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHHHHH-----TTCCEEEECCSSTTHHHHHHHHTSCCCCTTCEEEESEEETTCCTTSTTS
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHH-----CCCCEEEECCCCCHHHHHHHHHHHCCCCHHEEEEECCEEECCCCCCHHH
T ss_conf 95499969999999999999999997-----5998799799725999999999847990366999583797689985677
Q ss_pred HHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEEC----C
Q ss_conf 278899976235677632144458878989999999999963158776489944788771434027864100221----5
Q gi|254780505|r 82 NQSFISKFFLQNKAQKASFIPLYYPQKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIAL----D 157 (234)
Q Consensus 82 n~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~----~ 157 (234)
|+.+++++|+++.+.+..+++. ....+++++++.|+..+.. ++||+++||||+|||+||||||++...... .
T Consensus 76 ~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~Dl~lLG~G~DGHiAs~fP~~~~~~~~~~~~~~ 151 (234)
T 2ri0_A 76 YAYFMKQNLFAAKPFKKSYLPN-GLAADLAKETEYYDQILAQ---YPIDLQILGIGRNAHIGFNEPGTAFSSQTHLVDLT 151 (234)
T ss_dssp HHHHHHHHTTTTSCCSEEECCC-TTCSCHHHHHHHHHHHHHH---SCCSEEEECCCTTSCBTTBCTTCCTTCCSEEEECC
T ss_pred HHHHHHHHHHCCCCCHHCCCCC-CCCCCHHHHHHHHHHHHHC---CCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCC
T ss_conf 9999999863368802103899-9877899999999988752---79709998435778445436798432234332343
Q ss_pred CC--CCCCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf 66--743189953899872158708788841582999981834899999998089832060899961899968998
Q gi|254780505|r 158 TH--TPRSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLEVH 231 (234)
Q Consensus 158 ~~--~~~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~V~ 231 (234)
.. ..........+.+|.+|||||++.|++|++|+|+++|++|+++++++++|+++..+||++|+.|+++.+++.
T Consensus 152 ~~t~~~~~~~~~~~~~~p~~riTlt~~~i~~ak~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~l~~h~~~~~~~D 227 (234)
T 2ri0_A 152 PSTIAANSRFFEKAEDVPKQAISMGLASIMSAKMILLMAFGEEKAEAVAAMVKGPVTEEIPASILQTHPKVILIVD 227 (234)
T ss_dssp HHHHHHHHTTCSCGGGSCCEEEECCHHHHHTSSEEEEEECSGGGHHHHHHHHHSCCCTTSGGGGGGGCSSEEEEEE
T ss_pred HHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCEEEEEECCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEE
T ss_conf 6788665422688753111666368899840687999977879999999998389987465599715998799974
No 16
>2o0m_A Transcriptional regulator, SORC family; structural genomics, PSI-2, protein structure initiative; 1.60A {Enterococcus faecalis V583} SCOP: c.124.1.8
Probab=99.58 E-value=9.5e-16 Score=115.13 Aligned_cols=192 Identities=13% Similarity=0.144 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 89999999999999999999728977999879864699998787630795323899813210035673202788999762
Q gi|254780505|r 12 KKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFISKFFL 91 (234)
Q Consensus 12 ~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ll 91 (234)
.+...+.+++..+..+...++ ++...|++++|+|+..+++.|.....++.++.++.+....-. +.+.+...+-..|-
T Consensus 120 ~~~~~~~lg~aaA~~L~~~l~-~gd~vIgvswG~Tl~~~~~~l~~~~~~~~~v~~v~~~g~~~~--~~~~~~~~i~~~lA 196 (345)
T 2o0m_A 120 QKKVLSDFGDVLTNTLNLLLP-NGENTIAVMGGTTMAMVAENMGSLETEKRHNLFVPARGGIGE--AVSVQANSISAVMA 196 (345)
T ss_dssp CTHHHHHHHHHHHHHHHHHCC-SEEEEEEECCSHHHHHHHHTCCCCCCSSEEEEEEESBSCCCC--CGGGSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHCC-CCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC--CCCCCHHHHHHHHH
T ss_conf 389999999999999998643-699799993538999999973313688871899966776777--77778889999999
Q ss_pred CCCCCCCCEEECCCCCCCHHHHHHH------HHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEECCCCC---CC
Q ss_conf 3567763214445887898999999------99999631587764899447887714340278641002215667---43
Q gi|254780505|r 92 QNKAQKASFIPLYYPQKTIEEAIRI------ANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIALDTHT---PR 162 (234)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~~~~~---~~ 162 (234)
+....+..+++.|.-.. .+ ..+. +.+.+... ..+|++++|||+++|.+++++.++..-..+.... +-
T Consensus 197 ~~~~~~~~~L~aP~~~~-~e-~~~~l~~e~~i~~vl~~~--~~~dial~GIG~~~~~~~~~~~s~~~~~~L~~~gavGdi 272 (345)
T 2o0m_A 197 NKTGGNYRALYVPEQLS-RE-TYNSLLQEPSIQEVLTLI--SHANCVVHSIGRALHMAARRKMSDDEMVMLKQKNAVAES 272 (345)
T ss_dssp HHHTCEECCCCCCSSCC-HH-HHHHHHTCHHHHHHHHHH--HTCSEEEECCEEHHHHHHHTTCCHHHHHHHHHTTCCEEE
T ss_pred HHHCCCCEEECCCCCCC-HH-HHHHHHHHHHHHHHHHHH--HCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEH
T ss_conf 98099634433755378-99-999998646799999873--207999995588751002588998999999876866334
Q ss_pred CEEEECCCCCC---CEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCC
Q ss_conf 18995389987---2158708788841582999981834899999998089
Q gi|254780505|r 163 SVIAIKDYTSN---EQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGD 210 (234)
Q Consensus 163 ~~~~~~~~~~p---~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~ 210 (234)
...+.+....+ .++|++++..|.++++++++|.|++|++|++.++.|.
T Consensus 273 ~~~f~D~~G~~v~~~r~igi~l~~L~~ip~~I~VA~G~~Ka~AI~aAL~gg 323 (345)
T 2o0m_A 273 FGYFFDEEGKVVYKIPRIGLQLKNLQEIPYVVAIAGGKTKAKAIRAYMKNA 323 (345)
T ss_dssp TTEEECTTSCEEEECCCSBCCGGGGGGCSEEEEECCSGGGHHHHHHHHTTS
T ss_pred HCCEECCCCCCCCCCCEECCCHHHHHCCCCEEEEECCHHHHHHHHHHHHCC
T ss_conf 113467899867888742589899826993899976727899999999579
No 17
>2okg_A Central glycolytic gene regulator; alpha/beta/alpha sandwich, rossmann-like fold, structural genomics, PSI-2, protein structure initiative; HET: MSE G3H; 1.65A {Bacillus subtilis} SCOP: c.124.1.8 PDB: 3bxe_A* 3bxf_A* 3bxg_A* 3bxh_A*
Probab=99.58 E-value=2.2e-15 Score=112.84 Aligned_cols=199 Identities=9% Similarity=0.058 Sum_probs=124.6
Q ss_pred EEEEEC----CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 899948----9899999999999999999997289779998798646999987876307953238998132100356732
Q gi|254780505|r 5 KLYVAE----NKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLR 80 (234)
Q Consensus 5 ~i~i~~----~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~ 80 (234)
+++|.+ +.++..+.+++..++.+.+.+ ++...|++++|+|+..+++.|.... ...+++|..++. .++. +.+
T Consensus 24 ~~~Vv~~~~~~~~~~~~~l~~aaA~~L~~~l--~~~~~igvswG~T~~~~~~~l~~~~-~~~~v~vv~l~G-~~~~-~~~ 98 (255)
T 2okg_A 24 DAIIVSGDSDQSPWVKKEMGRAAVACMKKRF--SGKNIVAVTGGTTIEAVAEMMTPDS-KNRELLFVPARG-GLGE-DVK 98 (255)
T ss_dssp EEEEESSCTTTCTHHHHHHHHHHHHHHHHHC--CSEEEEEECCSHHHHHHHHHCCCCT-TCCEEEEEESEE-ECC----C
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHHHC--CCCCEEEEECCHHHHHHHHHHHCCC-CCCCEEEEECCC-CCCC-CCC
T ss_conf 8999669988766999999999999999865--7998899956789999999730005-688717998058-7788-877
Q ss_pred CHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHH-----HHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEE
Q ss_conf 0278899976235677632144458878989999-----99999996315877648994478877143402786410022
Q gi|254780505|r 81 SNQSFISKFFLQNKAQKASFIPLYYPQKTIEEAI-----RIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIA 155 (234)
Q Consensus 81 Sn~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~ 155 (234)
++...+...|.++...+..++|.|.-. +.++.. ..+.+.+.... ..|++++|+|.+||+++++|.++.--..
T Consensus 99 ~~~~~~~~~lA~~~~~~~~~l~aP~~~-~~~~~~~l~~~~~i~~~l~~~~--~~Dial~GIG~~~~~~~~~~~~~~~~~~ 175 (255)
T 2okg_A 99 NQANTICAHMAEKASGTYRLLFVPGQL-SQGAYSSIIEEPSVKEVLNTIK--SASMLVHGIGEAKTMAQRRNTPLEDLKK 175 (255)
T ss_dssp CHHHHHHHHHHHHHTCEECCCCCCCSC-CHHHHHHHHTSHHHHHHHHHHH--TCSEEEECCEEHHHHHHHTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHCCCCEEEECCCCCC-CHHHHHHHHHCHHHHHHHHHHC--CCCEEEEECCCCCCCCCCCCCCHHHHHH
T ss_conf 588999999999819963543488778-9899999986868999999703--7988999467676322048899899999
Q ss_pred CCCCC-----CCCEEEECCCCC-CCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf 15667-----431899538998-721587087888415829999818348999999980898
Q gi|254780505|r 156 LDTHT-----PRSVIAIKDYTS-NEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD 211 (234)
Q Consensus 156 ~~~~~-----~~~~~~~~~~~~-p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~ 211 (234)
+.... ...++....... +.+.|++++..|+++++++++|.|++|+++++.++.|..
T Consensus 176 l~~~gavgdi~~~f~d~~G~~~~~~r~igi~l~~l~~~~~~I~vA~G~~K~~AI~aaL~g~~ 237 (255)
T 2okg_A 176 IDDNDAVTEAFGYYFNADGEVVHKVHSVGMQLDDIDAIPDIIAVAGGSSKAEAIEAYFKKPR 237 (255)
T ss_dssp HHHTTEEEEETTEEEETTSCEEEECSEEECCGGGGGGCSEEEEECCSGGGHHHHHHHTTSCC
T ss_pred HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
T ss_conf 98724188897504126998302451104587897168968999768066999999982599
No 18
>2gnp_A Transcriptional regulator; structural genomics, MCSG, APC84799, PSI, protein structure initiative; 1.65A {Streptococcus pneumoniae TIGR4} SCOP: c.124.1.8
Probab=99.15 E-value=9e-10 Score=78.51 Aligned_cols=194 Identities=10% Similarity=0.014 Sum_probs=117.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98999999999999999999972897799987986469999878763079532389981321003567320278899976
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFISKFF 90 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~l 90 (234)
+.+.+.+.++...++.+...+++ ...|++++|+|...+.+.|... +..+++|+.+.-- ++..+...+...+-..|
T Consensus 35 ~~~~~~~~l~~~aA~~l~~~l~~--~~~IGv~wG~Tl~~~~~~l~~~--~~~~~~vv~l~Gg-~~~~~~~~~~~~i~~~l 109 (266)
T 2gnp_A 35 TPTILSERISQVAAGVLRNLIDD--NMKIGFSWGKSLSNLVDLIHSK--SVRNVHFYPLAGG-PSHIHAKYHVNTLIYEM 109 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCT--TCEEEECCSHHHHHHHHHCCCC--CCSSCEEEESBCC-CTTSCGGGSHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCC--CCEEEEECCHHHHHHHHHHCCC--CCCCCEEEECCCC-CCCCCCCCCHHHHHHHH
T ss_conf 76799999999999999985778--9989993888899999971755--7677348824788-77776656899999999
Q ss_pred HCCCCCCCCEEECCCCCCCHHHHHH-----HHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEE---CCCC---
Q ss_conf 2356776321444588789899999-----9999996315877648994478877143402786410022---1566---
Q gi|254780505|r 91 LQNKAQKASFIPLYYPQKTIEEAIR-----IANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIA---LDTH--- 159 (234)
Q Consensus 91 l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~---~~~~--- 159 (234)
-.+...+..+++.|.-..+.+.... .+.+.+.... ..|++++|+|.-++.+++++..-..+.. +...
T Consensus 110 A~~~~~~~~~l~aP~~~~s~~~~~~l~~~~~i~~~~~~~~--~~diaivGIG~~~~~~~~~~~~~~~~~~~~~l~~~gav 187 (266)
T 2gnp_A 110 SRKFHGECTFMNATIVQENKLLADGILQSRYFENLKNSWK--DLDIAVVGIGDFSNKGKHQWLDMLTEDDFKELTKVKTV 187 (266)
T ss_dssp HHHHTCEECCCCSCSBCSSHHHHHHHHTSTTTHHHHHHTT--SCSEEEECCEECSHHHHHTTTTTSCHHHHHHHHHTTCC
T ss_pred HHHCCCEEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHHH--CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHH
T ss_conf 9980996652247556799999999975769999999984--49999995766777753003689999999999876869
Q ss_pred CCCCEEEECCCCC------CCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf 7431899538998------721587087888415829999818348999999980898
Q gi|254780505|r 160 TPRSVIAIKDYTS------NEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD 211 (234)
Q Consensus 160 ~~~~~~~~~~~~~------p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~ 211 (234)
.+-...+.+.... ..+-|++++..|.++++++.++.|++|++++..++.|.-
T Consensus 188 Gdi~g~f~d~~G~~v~~~~~~r~I~i~l~~l~~~~~vI~vA~G~~K~~aI~aAL~gg~ 245 (266)
T 2gnp_A 188 GEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRANL 245 (266)
T ss_dssp EEETTEEECTTSCCCCHHHHTTBCBCCHHHHTTSSEEEEECCSGGGHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHCCCCEEEEECCHHHHHHHHHHHHCCC
T ss_conf 9999887345899865777751442578997068968999568166999999983599
No 19
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens TC1}
Probab=99.01 E-value=6.7e-09 Score=73.16 Aligned_cols=207 Identities=14% Similarity=0.108 Sum_probs=116.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC-CCCCCCCCHHHHHHH
Q ss_conf 8989999999999999999999728977999879864699998787630795323899813210-035673202788999
Q gi|254780505|r 10 ENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERF-VPLENLRSNQSFISK 88 (234)
Q Consensus 10 ~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~-V~~~~~~Sn~~~~~~ 88 (234)
.+.++..+.++...++.+...++ +...|++++|+|+..+++.|.... -..+.++.+.... .+.+.. .+...+-.
T Consensus 33 ~~~~~~~~~v~~~aA~~l~~~l~--~~~~iGv~wG~Tl~~~~~~l~~~~--~~~~~vv~l~g~~~~~~~~~-~~~~~i~~ 107 (267)
T 3nze_A 33 LNEAETLDRVAMQAARTIGPLVD--SNAIIGVAWGATLSAVSRHLTRKM--THDSIVVQLNGAGNMQTTGI-TYASDIMR 107 (267)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGCC--SSCEEEECCSHHHHHHHHTCCCCC--CSSCEEEECSCCCCTTSCSH-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCC--CCCEEEECCCHHHHHHHHHHCCCC--CCCCEEEECCCCCCCCCCCC-CCHHHHHH
T ss_conf 98489999999999999998688--999899858888999999733124--79988996678887777666-69999999
Q ss_pred HHHCCCCCCCCEEECCCCCCCHHHH-----HHHHHHHHHHHCCCCCCEEEECCCCCCCEE--EECCCC----CCCEEEC-
Q ss_conf 7623567763214445887898999-----999999996315877648994478877143--402786----4100221-
Q gi|254780505|r 89 FFLQNKAQKASFIPLYYPQKTIEEA-----IRIANEKICQLIHFPFDVVVLGMGIDGHTA--SFFPKG----DTLSIAL- 156 (234)
Q Consensus 89 ~ll~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~A--SlFP~~----~~l~~~~- 156 (234)
.|-.....+..++|.|.--.+.+.. ...+.+.++... ..|++++|+|.=++-. .+++.. ..+....
T Consensus 108 ~lA~~~~~~~~~l~aP~~v~s~~~~~~l~~~~~i~~~l~~~~--~~diai~GIG~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (267)
T 3nze_A 108 RFGSAYGARVEQFPVPAFFDHASTKTAMWNERSVQRILDLQA--RMSIAIFGVGSVDSDYPSHVYAGGYLDEHDLTMLAA 185 (267)
T ss_dssp HHHHHHTCEEECCCSCSSCSSHHHHHHHTTCHHHHHHHHHHH--TCSEEEECCEECC-----CCCTTSCCCHHHHHHHHH
T ss_pred HHHHHHCCCEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH--CCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHH
T ss_conf 999983995114577432698999999986869999999984--699899965788888851020379999999999987
Q ss_pred ---CCCCCCCEEEECCCCC----CCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC-----CCCCCHHHHHHC
Q ss_conf ---5667431899538998----721587087888415829999818348999999980898-----320608999618
Q gi|254780505|r 157 ---DTHTPRSVIAIKDYTS----NEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD-----ALEMPIRAILWN 223 (234)
Q Consensus 157 ---~~~~~~~~~~~~~~~~----p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~-----~~~~Pas~ll~~ 223 (234)
.-+-.-.++-.+.... ..+.|++++..|++++++++++.|++|++++..++.+.- +.+--|..||..
T Consensus 186 ~gavGdi~g~ffd~~G~~v~~~~~~r~igi~l~~l~~i~~vI~vA~G~~K~~AI~aAL~gg~i~~LITDe~tA~~LL~~ 264 (267)
T 3nze_A 186 DDVVGDVATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAGLATDLILDEASARRLVSF 264 (267)
T ss_dssp TTEEEEETTEEEETTSCCTTCGGGGGCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHTTCCSEEEEEHHHHHHHTC-
T ss_pred CCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
T ss_conf 8855888342514789886765665301368899826897899967816699999999469997899799999999810
No 20
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2a str} SCOP: c.124.1.8
Probab=98.99 E-value=5e-09 Score=73.95 Aligned_cols=193 Identities=9% Similarity=-0.014 Sum_probs=106.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC---CCCCCHHHHHH
Q ss_conf 989999999999999999999728977999879864699998787630795323899813210035---67320278899
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPL---ENLRSNQSFIS 87 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~---~~~~Sn~~~~~ 87 (234)
+.+...+.++...++.+.+.++ +.-.||++.|+|+..+++.|....- -.++.|..+=- .+.. .+.++| .+.
T Consensus 38 ~~~~~~~~l~~aAA~~l~~~l~--~~~~iGv~wG~Tl~~~~~~l~~~~~-~~~~~~v~l~G-g~~~~~~~~~~~~--~~~ 111 (266)
T 3efb_A 38 DEETQLAMMGLHGAQLLDRLLE--PGDIVGFSWGRAVSALVENLPQAGQ-SRQLICVPIIG-GPSGKLESRYHVN--TLT 111 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCC--TTCEEEECCSHHHHHHHHTCCCCSS-CCCCEEEESBC-BCTTSSCGGGCHH--HHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCC--CCCEEEECCCHHHHHHHHHCCCCCC-CCCEEEEEECC-CCCCCCCCCCCHH--HHH
T ss_conf 7168999999999999998678--9998998188889999997021157-88808998147-7776667765879--999
Q ss_pred HHHHCCCCCCCCEEECCCCCCCHHHH-----HHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCC----CCEEECCC
Q ss_conf 97623567763214445887898999-----9999999963158776489944788771434027864----10022156
Q gi|254780505|r 88 KFFLQNKAQKASFIPLYYPQKTIEEA-----IRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGD----TLSIALDT 158 (234)
Q Consensus 88 ~~ll~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~----~l~~~~~~ 158 (234)
..|-.....+..++|.|.--.+.+.. ...+.+.+.... ..|++++|+|.-+|..++.+..- .+......
T Consensus 112 ~~lA~~~~~~~~~l~aP~~v~s~~~~~~l~~~~~v~~~~~~~~--~~dial~GIG~~~~~~~~~~~~~~~~~~~~~l~~~ 189 (266)
T 3efb_A 112 YSAAAKLKGESHLADFPALLDNPLIRNGIMQSQHFKTISAYWD--NLDIALVGIGSPAIRDGANWHAFYGGEESDDLNAR 189 (266)
T ss_dssp HHHHHHTTCEECCCCSBSBCSSHHHHHHHHTSHHHHHHHHHHH--TCSEEEECCBCCC---------CSCHHHHHHHHHT
T ss_pred HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH--CCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 9999981896436677445899899999986669999999873--59999991787876565343678888999999772
Q ss_pred ----CCCCCEEEECCCCC----CCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf ----67431899538998----721587087888415829999818348999999980898
Q gi|254780505|r 159 ----HTPRSVIAIKDYTS----NEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD 211 (234)
Q Consensus 159 ----~~~~~~~~~~~~~~----p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~ 211 (234)
+-...++-.+.... ..+-|++++..|++++++++++.|++|+++++.++.|.-
T Consensus 190 gavGdi~~~f~d~~G~~v~~~~~~r~igi~l~~lr~i~~~I~vA~G~~K~~aI~aALrgg~ 250 (266)
T 3efb_A 190 QVAGDICSRFFDIHGAMVETNMSEKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRGKY 250 (266)
T ss_dssp TCCEEETTEEECTTSCBCCCTTGGGBCBCCHHHHHTSSEEEEECCCSCSSCHHHHHHHTTS
T ss_pred CHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
T ss_conf 7399998504225899977645453421687896468968999668167999999983599
No 21
>2w48_A Sorbitol operon regulator; SORC, activator, repressor, DNA-binding, transcription, transcription regulator, transcription regulation; 3.20A {Klebsiella pneumoniae}
Probab=98.84 E-value=1.5e-07 Score=64.93 Aligned_cols=191 Identities=12% Similarity=0.017 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC-C-CCCCCHHHHHHHHHH
Q ss_conf 99999999999999999972897799987986469999878763079532389981321003-5-673202788999762
Q gi|254780505|r 14 RLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVP-L-ENLRSNQSFISKFFL 91 (234)
Q Consensus 14 ~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~-~-~~~~Sn~~~~~~~ll 91 (234)
+..+.++..-+..+...++ + .-.|+++.|+|...+.+.|.... ...++.|..+-=-.-. . .+.++| .+-..+-
T Consensus 90 ~~~~~l~~~aa~~l~~~l~-~-~~~iGvswG~Tl~~~~~~l~~~~-~~~~v~~v~l~G~~~~~~~~~~~~~--~~~~~~A 164 (315)
T 2w48_A 90 EQLSAMGQHGALLVDRLLE-P-GDIIGFSWGRAVRSLVENLPQRS-QSRQVICVPIIGGPSGKLESRYHVN--TLTYGAA 164 (315)
T ss_dssp HHHHHHHHHHHHHHHHHCC-T-TCEEEECCSHHHHHHHTTSCCCS-SCCCCEEEESBCBCTTSSCGGGCHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC-C-CCEEEECCCHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCCCCCCCCHH--HHHHHHH
T ss_conf 7999999999999996267-9-99899825399999999700104-6788189970577788766645889--9999999
Q ss_pred CCCCCCCCEEECCCCCCCHHHHH-----HHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCC----CCCCEEECCC----
Q ss_conf 35677632144458878989999-----9999999631587764899447887714340278----6410022156----
Q gi|254780505|r 92 QNKAQKASFIPLYYPQKTIEEAI-----RIANEKICQLIHFPFDVVVLGMGIDGHTASFFPK----GDTLSIALDT---- 158 (234)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~----~~~l~~~~~~---- 158 (234)
.....+..+++.|.--.+++... ..+.+.+.... ..|++++|+|.-++..+++.. ...+......
T Consensus 165 ~~~~~~~~~l~aP~~~~s~~~~~~l~~~~~i~~~~~~~~--~~dial~GIG~~~~~~~~~~~~~~~~~~~~~l~~~gaVG 242 (315)
T 2w48_A 165 ARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWD--SLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAG 242 (315)
T ss_dssp HHTTCEECCCCSBSBCSSHHHHHHHHHSHHHHHHHHHHT--TCSEEEECCBCTTCCSSSCHHHHHCTHHHHHHHHTTEEE
T ss_pred HHHCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH--HCCEEEEECCCCCCCCCCHHCCCCCHHHHHHHHHCCCHH
T ss_conf 984797546766534799899999996623999999997--499999965877666741230589999999998678299
Q ss_pred CCCCCEEEECCCCC----CCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf 67431899538998----721587087888415829999818348999999980898
Q gi|254780505|r 159 HTPRSVIAIKDYTS----NEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD 211 (234)
Q Consensus 159 ~~~~~~~~~~~~~~----p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~ 211 (234)
+-.-.++-.+.... ..+.|++++..|.++++++.++.|++|++++..++.|.-
T Consensus 243 di~g~f~d~~G~~v~~~~~~r~i~i~l~~lr~i~~~I~vA~G~~K~~AI~aAL~gg~ 299 (315)
T 2w48_A 243 DICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRY 299 (315)
T ss_dssp EETTEEEETTSCBCCCSSGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTS
T ss_pred HHHHHHHHCCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 999998703899987876664523787997268978999668455999999983699
No 22
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.70A {Vibrio fischeri ES114}
Probab=98.31 E-value=1.3e-05 Score=52.96 Aligned_cols=195 Identities=9% Similarity=0.050 Sum_probs=111.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 89899999999999999999997289779998798646999987876307953238998132100356732027889997
Q gi|254780505|r 10 ENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFISKF 89 (234)
Q Consensus 10 ~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ 89 (234)
++.++..+.+++..++.+...++. .-.|+++.|+|...+.+.|... .-.+++|..+== -+...+...+...+-+.
T Consensus 32 ~~~~~~~~~v~~~aA~~l~~~l~~--~~~iGv~wG~Tl~~~~~~l~~~--~~~~~~vv~l~G-g~~~~~~~~~~~~i~~~ 106 (267)
T 3kv1_A 32 PNTNEQRKQVAALVSSYLNNNLQE--GMAVAVGQGQNVAAVADHAGIV--TQRNARFVSAIG-GTHRSGDIINADHICRR 106 (267)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCCT--TCEEEECCSHHHHHHHHCCCCC--CCCCCEEEESBC-BCC----CCCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCC--CCEEEEECCHHHHHHHHHCCCC--CCCCCEEEECCC-CCCCCCCCCCHHHHHHH
T ss_conf 993699999999999999975768--9889994788999999835766--778956994688-76777675689999999
Q ss_pred HHCCCCCCCCEEECCCCCCCHHHHH-----HHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCC-----CCCEEECCC-
Q ss_conf 6235677632144458878989999-----99999996315877648994478877143402786-----410022156-
Q gi|254780505|r 90 FLQNKAQKASFIPLYYPQKTIEEAI-----RIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKG-----DTLSIALDT- 158 (234)
Q Consensus 90 ll~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~-----~~l~~~~~~- 158 (234)
|-+....+..++|.|.--.+.+... ..+.+-+.... ..|+++.|+|.=+..+++.... +........
T Consensus 107 lA~~~gg~~~~l~aP~~v~s~~~~~~l~~e~~i~~~l~~~~--~~diai~GIG~~~~~~~~~~~~~~~~~e~~~~l~~~g 184 (267)
T 3kv1_A 107 LAKKYGGSSETLYAPAYVNDPSLRSAFMEHATIKETLSQAR--KAEFALVGIGDMDENSHMVKLGFFTPKEFVEARLNDG 184 (267)
T ss_dssp HHHHHTCEEECCCSBSBCSSHHHHHHHHTSHHHHHHHHHHH--TCSEEEEEEEEHHHHTHHHHTTSSCHHHHHHHHHTTC
T ss_pred HHHHHCCEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHH--HCCEEEEECCCCCCCCHHHHCCCCCHHHHHHHHHHCC
T ss_conf 99982998999827822799999999975868999999998--6999999526888774045416898699999999789
Q ss_pred -C---CCCCEEEECCCCC--C-C-EEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf -6---7431899538998--7-2-1587087888415829999818348999999980898
Q gi|254780505|r 159 -H---TPRSVIAIKDYTS--N-E-QRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD 211 (234)
Q Consensus 159 -~---~~~~~~~~~~~~~--p-~-~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~ 211 (234)
. ....++-.+.... + . +.|.+++..|.+.++++.++.|++|++++..++.|.-
T Consensus 185 avgdi~~~rf~D~~G~~v~~~~~~r~igi~le~l~~ip~~I~vA~G~~K~~AI~aALrgg~ 245 (267)
T 3kv1_A 185 IVGDIGGFDFFKLDGTDADTLMRGRVIGLEMEDLRQIPNVVAMASESRKALSIMGALRTGV 245 (267)
T ss_dssp EEEEETTTEEEETTSCBCCCGGGGGBCBCCHHHHHTSSEEEEECCCGGGHHHHHHHHHTSC
T ss_pred CEEEEECCEEECCCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCCHHHHHHHHHHHCCC
T ss_conf 5799933403658998955634254211687997479968999678166999999983599
No 23
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural genomics, PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=98.22 E-value=8.3e-05 Score=48.07 Aligned_cols=195 Identities=12% Similarity=0.118 Sum_probs=100.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE-CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9899999999999999999997289779998-798646999987876307953238998132100356732027889997
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGTASIAL-SGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFISKF 89 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~l-sGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ 89 (234)
+.+...+.++...+..+.+.++.. -.|++ +.|+|...+-+.|......-..++|..+-= -+....+ -+...+-..
T Consensus 35 ~~~~~~~~lg~~aA~~L~~~l~~~--~~iGv~~WG~Tv~~~~~~l~~~~~~~~~~~vV~l~G-g~~~~~~-~~~~~i~~~ 110 (264)
T 2r5f_A 35 DEESIKQAIGSAAAHYLETSLSAQ--DHIGISSWSSTIRAMVSHMHPQPGKQSAQEVVQLLG-GVGNKGA-FEATLLTQR 110 (264)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCTT--CEEEECTTCHHHHHHHHTCCC--CCCCCSEEEECEE-CCC--CH-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCC--CEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCC-CCCCCCC-CCHHHHHHH
T ss_conf 768999999999999999865569--879994465899999986277766668986996679-9988876-579999999
Q ss_pred HHCCCCCCCCEEECCCCCCCHHH-----HHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECC-----CCCCCEEECCC-
Q ss_conf 62356776321444588789899-----99999999963158776489944788771434027-----86410022156-
Q gi|254780505|r 90 FLQNKAQKASFIPLYYPQKTIEE-----AIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFP-----KGDTLSIALDT- 158 (234)
Q Consensus 90 ll~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP-----~~~~l~~~~~~- 158 (234)
|-+....+..++|.|.-..+.+. .-..+.+-++... ..|++++|+|.=..-++++- ..+.++.....
T Consensus 111 lA~~~~~~~~~l~aP~~~~s~~~~~~l~~~~~v~~~l~~~~--~~diav~gIG~~~~~s~~~~~g~~~~~~~~~~l~~~g 188 (264)
T 2r5f_A 111 LATLLNCPAFLLPSQSIEQSVESKQRIVEMEEVKEVLHRFD--SITLAIVGIGELEPSQLLRNSGNYYTEDMLRVLAERG 188 (264)
T ss_dssp HHHHHTSCEECCCCC----------CCHHHHHHHHHHHHTT--TCCEEEECCEECC-------------------CTTTT
T ss_pred HHHHHCCEEEECCCCHHCCCHHHHHHHHHCHHHHHHHHHHH--HCCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCC
T ss_conf 99970982782057010068999999985938999999997--5999999547887662145506879999999998789
Q ss_pred -CCCCCEEEECCCCC----C-CEE-EEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf -67431899538998----7-215-87087888415829999818348999999980898
Q gi|254780505|r 159 -HTPRSVIAIKDYTS----N-EQR-MTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD 211 (234)
Q Consensus 159 -~~~~~~~~~~~~~~----p-~~R-ITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~ 211 (234)
..+-...+.+.... + ..| |.+++..|.+.++++.++.|++|++++..++.|.-
T Consensus 189 AVGdi~g~f~D~~G~~v~~~~~~r~igi~l~~Lr~i~~~I~VA~G~~K~~AI~aALrgg~ 248 (264)
T 2r5f_A 189 AVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGGY 248 (264)
T ss_dssp CCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTC
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
T ss_conf 399968126856898986544023514787895679968999667465999999983699
No 24
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii OT3} PDB: 2z0c_A 3a4i_A
Probab=83.61 E-value=2.1 Score=21.04 Aligned_cols=54 Identities=19% Similarity=0.311 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 999999999999972897799987986469999878763079532389981321003
Q gi|254780505|r 19 LAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVP 75 (234)
Q Consensus 19 ~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~ 75 (234)
..+..++.|++.+.. ..+.+++|||--- .+...|+.+-+. .++.-..+|.-+.+
T Consensus 6 fIe~~I~~Ir~~vg~-~kVvvalSGGVDS-sV~A~L~~kAlG-d~v~aV~~d~g~~r 59 (308)
T 2dpl_A 6 FVEEKVREIRETVGD-SKAIIALSGGVDS-STAAVLAHKAIG-DRLHAVFVNTGFLR 59 (308)
T ss_dssp HHHHHHHHHHHHHTT-SCEEEECCSSHHH-HHHHHHHHHHHG-GGEEEEEEECSCCC
T ss_pred HHHHHHHHHHHHHCC-CCEEEEECCCHHH-HHHHHHHHHHHC-CCEEEEEECCCCCC
T ss_conf 999999999998489-9899990488999-999999999738-86899994788788
No 25
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=80.08 E-value=2.9 Score=20.25 Aligned_cols=37 Identities=22% Similarity=0.161 Sum_probs=20.9
Q ss_pred CCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 321444588789899999999999631587764899447
Q gi|254780505|r 98 ASFIPLYYPQKTIEEAIRIANEKICQLIHFPFDVVVLGM 136 (234)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGi 136 (234)
.-++-++.+-.+.+|....+...--..... .+++|..
T Consensus 111 dafIvlPGG~GTLdEl~evltl~qlg~~~k--piilln~ 147 (215)
T 2a33_A 111 DAFIALPGGYGTLEELLEVITWAQLGIHDK--PVGLLNV 147 (215)
T ss_dssp SEEEECSCCHHHHHHHHHHHHHHHTTSCCC--CEEEECG
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCC--CEEEEEC
T ss_conf 788991887412888999999998088788--8489836
No 26
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=77.09 E-value=3.5 Score=19.70 Aligned_cols=37 Identities=14% Similarity=0.003 Sum_probs=20.6
Q ss_pred CCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECC
Q ss_conf 321444588789899999999999631587764899447
Q gi|254780505|r 98 ASFIPLYYPQKTIEEAIRIANEKICQLIHFPFDVVVLGM 136 (234)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGi 136 (234)
.-++-++..-.+.+|-...+...- +...+--+++++.
T Consensus 99 dafI~lPGG~GTLdEl~e~lt~~q--l~~~~kPiil~n~ 135 (191)
T 1t35_A 99 DGFISMPGGFGTYEELFEVLCWAQ--IGIHQKPIGLYNV 135 (191)
T ss_dssp SEEEECSCCHHHHHHHHHHHHTTS--CSSCCCCEEEECG
T ss_pred CEEEEECCCCCHHHHHHHHHHHHH--CCCCCCCEEEECC
T ss_conf 878995786113999999999987--0568898577466
No 27
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=75.85 E-value=3.8 Score=19.49 Aligned_cols=21 Identities=29% Similarity=0.271 Sum_probs=12.3
Q ss_pred CEEECCCCCCCHHHHHHHHHH
Q ss_conf 214445887898999999999
Q gi|254780505|r 99 SFIPLYYPQKTIEEAIRIANE 119 (234)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~ 119 (234)
-++-++.+-.+.+|-...+..
T Consensus 108 afIvlPGG~GTLdEl~evltl 128 (216)
T 1ydh_A 108 AFIALPGGYGTMEELLEMITW 128 (216)
T ss_dssp EEEECSCSHHHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHH
T ss_conf 899848872359999999999
No 28
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=75.20 E-value=3.9 Score=19.39 Aligned_cols=84 Identities=19% Similarity=0.136 Sum_probs=35.8
Q ss_pred HHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC-CCCEEEEECCCCCC-CCCCCC--CH-HHHHHHHHHCCCCCCCCEEEC
Q ss_conf 99972897799987986469999878763079-53238998132100-356732--02-788999762356776321444
Q gi|254780505|r 29 IGITNKGTASIALSGGLTPRFFLEELSIINVD-WHKVVVTLVDERFV-PLENLR--SN-QSFISKFFLQNKAQKASFIPL 103 (234)
Q Consensus 29 ~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~-w~kv~~~~~DER~V-~~~~~~--Sn-~~~~~~~ll~~~~~~~~~~~~ 103 (234)
..+.++|. ++++||.. ++-.+.++.-.. =-++.=+.-||.-. +.-+.. .. ...-|+.++-.. ..-++-+
T Consensus 52 ~~La~~G~--~V~~GG~~--GlM~a~a~ga~~~GG~viGIiP~~~~~n~~~~~~~~~~~~~~~Rk~~m~~~--sDa~Ial 125 (195)
T 1rcu_A 52 RTLAKKGY--LVFNGGRD--GVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTGLDFQMRSFVLLRN--ADVVVSI 125 (195)
T ss_dssp HHHHHTTC--EEEECCSS--HHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECCCCHHHHHHHHHTT--CSEEEEE
T ss_pred HHHHHCCC--EEECCCHH--HHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCEEECCCHHHHHHHHHHC--CCCEEEE
T ss_conf 99998799--99948727--488999998886299068873267635775673134554467766787532--6620550
Q ss_pred CCCCCCHHHHHHHHH
Q ss_conf 588789899999999
Q gi|254780505|r 104 YYPQKTIEEAIRIAN 118 (234)
Q Consensus 104 ~~~~~~~~~~~~~~~ 118 (234)
+....+.+|....+.
T Consensus 126 PGG~GTL~El~~~~~ 140 (195)
T 1rcu_A 126 GGEIGTAIEILGAYA 140 (195)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHH
T ss_conf 434435899999999
No 29
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=72.03 E-value=4.7 Score=18.92 Aligned_cols=103 Identities=16% Similarity=0.148 Sum_probs=53.8
Q ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHH--CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECC---
Q ss_conf 9972897799987986469999878763--07953238998132100356732027889997623567763214445---
Q gi|254780505|r 30 GITNKGTASIALSGGLTPRFFLEELSII--NVDWHKVVVTLVDERFVPLENLRSNQSFISKFFLQNKAQKASFIPLY--- 104 (234)
Q Consensus 30 ~i~~~~~~~i~lsGGstp~~~y~~L~~~--~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ll~~~~~~~~~~~~~--- 104 (234)
.+++.....||+|||.--..++..|... ..++ ++...++|..+=+.++.+ -..++++.- ....++.......
T Consensus 14 l~~~~~~v~va~SGG~DS~~Ll~~l~~~~~~~~~-~~~~~hvnh~lr~~~s~~-~~~~~~~~~-~~~~i~~~~~~~~~~~ 90 (464)
T 3a2k_A 14 LLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKL-QVIAAHVDHMFRGRESEE-EMEFVKRFC-VERRILCETAQIDVPA 90 (464)
T ss_dssp SSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTC-BCEEEEEECTTCTHHHHH-HHHHHHHHH-HHTTCEEEEEECCCHH
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCC-EEEEEEEECCCCCCCHHH-HHHHHHHHH-HHCCCEEEEEEEEEEH
T ss_conf 9998398999980719999999999998897298-599999779899866699-999999999-9849919999986001
Q ss_pred ---CCCCCHHHHHH--HHHHHHHHHCCCCCCEEEEC
Q ss_conf ---88789899999--99999963158776489944
Q gi|254780505|r 105 ---YPQKTIEEAIR--IANEKICQLIHFPFDVVVLG 135 (234)
Q Consensus 105 ---~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~lLG 135 (234)
....+.++.|+ +|..........++|.+++|
T Consensus 91 ~~~~~~~~~e~~aR~~Ry~~~~~~~~~~~~~~i~~a 126 (464)
T 3a2k_A 91 FQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVG 126 (464)
T ss_dssp HHTTTTCCSHHHHHHHHHHHHHHHHHTTTCCEEECC
T ss_pred HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEE
T ss_conf 102589898999999998764123334563158754
No 30
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni}
Probab=66.97 E-value=6 Score=18.26 Aligned_cols=59 Identities=15% Similarity=0.257 Sum_probs=32.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHH--CCCEEEEECCC--CCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf 98999999999999999999972--89779998798--646999987876307953238998132100356
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITN--KGTASIALSGG--LTPRFFLEELSIINVDWHKVVVTLVDERFVPLE 77 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~--~~~~~i~lsGG--stp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~ 77 (234)
|.+++. +.+...|++-+++ ...+.++|||| ||- .-.|+.+-+. +++....++.+..+..
T Consensus 5 d~~~~~----~~i~~~i~~~~~~~g~~~vvlglSGGVDSsv---~a~La~~al~-~~v~~v~~~~~~~~~~ 67 (249)
T 3p52_A 5 DWQKIT----EKMCDFIQEKVKNSQSQGVVLGLSGGIDSAL---VATLCKRALK-ENVFALLMPTQISNKA 67 (249)
T ss_dssp CHHHHH----HHHHHHHHHHHHTSSCSEEEEECCSSHHHHH---HHHHHHHHHT-TSEEEEECCSCCSSCH
T ss_pred CHHHHH----HHHHHHHHHHHHHHCCCEEEEECCCCHHHHH---HHHHHHHHCC-CCEEEEECCCCCCCHH
T ss_conf 899999----9999999999999299829997889889999---9999998448-7179985784110006
No 31
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus HB8} SCOP: c.129.1.1
Probab=60.54 E-value=5.5 Score=18.48 Aligned_cols=22 Identities=23% Similarity=0.137 Sum_probs=15.0
Q ss_pred CCEEECCCCCCCHHHHHHHHHH
Q ss_conf 3214445887898999999999
Q gi|254780505|r 98 ASFIPLYYPQKTIEEAIRIANE 119 (234)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~ 119 (234)
.-++-++..-.+.+|....+..
T Consensus 99 da~I~lPGG~GTL~El~~~~~~ 120 (171)
T 1weh_A 99 AGYLALPGGVGTLAELVLAWNL 120 (171)
T ss_dssp EEEEECSCCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHH
T ss_conf 9999938972139999999999
No 32
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=57.17 E-value=9.1 Score=17.17 Aligned_cols=39 Identities=23% Similarity=0.224 Sum_probs=23.5
Q ss_pred CEEECCCCCCCHHHHHHHHHHHHH-HHCCCCCCEEEECCCCCCCE
Q ss_conf 214445887898999999999996-31587764899447887714
Q gi|254780505|r 99 SFIPLYYPQKTIEEAIRIANEKIC-QLIHFPFDVVVLGMGIDGHT 142 (234)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~lLGiG~DGH~ 142 (234)
-++-++....+.+|-...+....- .....| +++++ +|.-
T Consensus 134 afI~LPGG~GTLdEl~e~lt~~qlg~~~~kP--iil~~---~gyw 173 (217)
T 1wek_A 134 GFVFLPGGFGTLDELSEVLVLLQTEKVHRFP--VFLLD---RGYW 173 (217)
T ss_dssp EEEECSCCHHHHHHHHHHHHHHHTTSSCCCC--EEEEC---HHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCCCE--EEEEC---CCCH
T ss_conf 6898488876189999999997625667873--99977---7501
No 33
>3kwm_A Ribose-5-phosphate isomerase A; structural genomics, IDP02119, center for structural genomics of infectious diseases, csgid; 2.32A {Francisella tularensis subsp}
Probab=56.55 E-value=9.3 Score=17.11 Aligned_cols=43 Identities=23% Similarity=0.360 Sum_probs=32.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHC
Q ss_conf 8989999999999999999999728977999879864699998787630
Q gi|254780505|r 10 ENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIIN 58 (234)
Q Consensus 10 ~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~ 58 (234)
.+.+++-+.+|...++.+ ++.-.|+|=+|||...+.+.|.++.
T Consensus 7 ~~~~~~K~~aa~~A~~~v------~~gmvIGLGtGSTv~~~i~~L~~~~ 49 (224)
T 3kwm_A 7 NNQDELKKLAATEAAKSI------TTEITLGVGTGSTVGFLIEELVNYR 49 (224)
T ss_dssp CCHHHHHHHHHHHHHTTC------CSSEEEEECCSHHHHHHHHHGGGCT
T ss_pred CCHHHHHHHHHHHHHHHC------CCCCEEEECCHHHHHHHHHHHHHCC
T ss_conf 899999999999999855------8999999586699999999999606
No 34
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=54.72 E-value=10 Score=16.92 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-----CCCEEEEECCCCC
Q ss_conf 8999999999999999999972-----8977999879864
Q gi|254780505|r 12 KKRLAQKLAKKVAEQLSIGITN-----KGTASIALSGGLT 46 (234)
Q Consensus 12 ~~~l~~~~a~~i~~~i~~~i~~-----~~~~~i~lsGGst 46 (234)
++.+++.=.+.+...+++++++ +.--.|+++.|.-
T Consensus 40 P~~A~r~H~~~l~~~i~~~l~~a~i~~~~id~iavt~gPG 79 (330)
T 2ivn_A 40 PKEAAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPG 79 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCC
T ss_conf 5899999999999999999998499855686688812898
No 35
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.10A {Pyrococcus horikoshii OT3}
Probab=51.82 E-value=11 Score=16.64 Aligned_cols=47 Identities=17% Similarity=0.250 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHCCCEEEEECCC--CCHHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 99999999999997289779998798--64699998787630795323899813
Q gi|254780505|r 19 LAKKVAEQLSIGITNKGTASIALSGG--LTPRFFLEELSIINVDWHKVVVTLVD 70 (234)
Q Consensus 19 ~a~~i~~~i~~~i~~~~~~~i~lsGG--stp~~~y~~L~~~~~~w~kv~~~~~D 70 (234)
+.+.+.+.+++. ....+.++|||| ||. .-.|+.+.+.-.++..+..+
T Consensus 9 ~v~~l~d~~~~~--g~~~vvvglSGGVDSav---~A~La~~AlG~~~v~~v~~~ 57 (257)
T 2e18_A 9 VIERILEFIREK--GNNGVVIGISGGVDSAT---VAYLATKALGKEKVLGLIMP 57 (257)
T ss_dssp HHHHHHHHHHHH--CTTCEEEECCSSHHHHH---HHHHHHHHHCGGGEEEEECC
T ss_pred HHHHHHHHHHHH--CCCCEEEECCCCHHHHH---HHHHHHHHCCCCEEEEECCC
T ss_conf 999999999983--99978996887799999---99999986386416885157
No 36
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei 1710B}
Probab=51.02 E-value=11 Score=16.56 Aligned_cols=39 Identities=21% Similarity=0.214 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC--CCHHHHH
Q ss_conf 9899999999999999999997289779998798--6469999
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGTASIALSGG--LTPRFFL 51 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGG--stp~~~y 51 (234)
++++..+...+.+-++++. .....+.|+|||| |+....+
T Consensus 25 ~~~~~i~~~v~~l~dy~~k--sg~k~vVvGlSGGVDSaV~A~L 65 (285)
T 3dpi_A 25 DARDEAERRIGFVADYLRT--AGLRACVLGISGGIDSSTAGRL 65 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHH--HTCCEEEEECCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHH--HCCCCEEEECCCCHHHHHHHHH
T ss_conf 9999999999999999998--1999699978888999999999
No 37
>2pjm_A Ribose-5-phosphate isomerase A; 3D-structure, structural genomics, pentose phosphate pathway, carbon fixation, NPPSFA; 1.78A {Methanocaldococcus jannaschii} PDB: 3ixq_A*
Probab=48.72 E-value=12 Score=16.50 Aligned_cols=40 Identities=30% Similarity=0.394 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 8999999999999999999972897799987986469999878763
Q gi|254780505|r 12 KKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSII 57 (234)
Q Consensus 12 ~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~ 57 (234)
.+++-+.+|...++.+ +....|+|-+|||...+.+.|.++
T Consensus 3 ~~~~K~~aA~~A~~~i------~~gmviGLGtGsTv~~~i~~L~~~ 42 (226)
T 2pjm_A 3 NEDLKLKVAKEAVKLV------KDGMVIGLGTGSTAALFIRELGNR 42 (226)
T ss_dssp CHHHHHHHHHHHGGGC------CTTCEEEECCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHC------CCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 8999999999999757------999999948769999999999875
No 38
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=45.58 E-value=9 Score=17.19 Aligned_cols=50 Identities=16% Similarity=0.224 Sum_probs=29.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 9899999999999999999997289-----7799987986469999878763079
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKG-----TASIALSGGLTPRFFLEELSIINVD 60 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~-----~~~i~lsGGstp~~~y~~L~~~~~~ 60 (234)
..+++.+.+-+.+...+++++++.+ --.|.|.||+|-.++.+.+.+..+.
T Consensus 273 ~fe~l~~~~~~~~~~~i~~~l~~a~~~~~~I~~V~LvGGssriP~v~~~l~~~fg 327 (509)
T 2v7y_A 273 KFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELG 327 (509)
T ss_dssp HHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCCHHHHHHHHHHHC
T ss_conf 9998889999999999999999839998999689998970476899999999858
No 39
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=45.12 E-value=14 Score=15.99 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-----CCCEEEEECCCCC
Q ss_conf 8999999999999999999972-----8977999879864
Q gi|254780505|r 12 KKRLAQKLAKKVAEQLSIGITN-----KGTASIALSGGLT 46 (234)
Q Consensus 12 ~~~l~~~~a~~i~~~i~~~i~~-----~~~~~i~lsGGst 46 (234)
++..++.=.+.+...+++++++ +.--.|+.+.|..
T Consensus 45 P~~A~r~H~~~l~~~i~~~l~~a~i~~~~id~ia~t~gPG 84 (334)
T 3eno_A 45 PLDAAVHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPG 84 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCC
T ss_conf 6999999999999999999997498643302688435787
No 40
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=45.00 E-value=14 Score=15.98 Aligned_cols=57 Identities=14% Similarity=0.075 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHH--HCCCEEEEECCCC-CHHHHH-----HHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 99999999999997--2897799987986-469999-----878763079532389981321003
Q gi|254780505|r 19 LAKKVAEQLSIGIT--NKGTASIALSGGL-TPRFFL-----EELSIINVDWHKVVVTLVDERFVP 75 (234)
Q Consensus 19 ~a~~i~~~i~~~i~--~~~~~~i~lsGGs-tp~~~y-----~~L~~~~~~w~kv~~~~~DER~V~ 75 (234)
+.+.+..++..... .+..+.||++||+ +.+..+ +.|.+..-.-.++.++-+|.++.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~P~iIgiaG~~GSGKSTla~~l~~~l~~~~~~~~~v~~iSlDdfY~~ 76 (290)
T 1odf_A 12 TIEFLDKYIPEWFETGNKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASIDDFYLT 76 (290)
T ss_dssp HHHHHHHHHHHHHTTTCCSCEEEEEECCTTSSHHHHHHHHHHHHHHHHGGGSCEEEEEGGGGBCC
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
T ss_conf 99999999999734589999899967898788999999999999975288870799634567779
No 41
>1lk5_A D-ribose-5-phosphate isomerase; alpha/beta structure; 1.75A {Pyrococcus horikoshii} SCOP: c.124.1.4 d.58.40.1 PDB: 1lk7_A*
Probab=44.52 E-value=14 Score=15.94 Aligned_cols=41 Identities=22% Similarity=0.312 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 98999999999999999999972897799987986469999878763
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSII 57 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~ 57 (234)
|.+++-+.+|+.-.+.+ ++.-.|+|-+|||...+.+.|.++
T Consensus 2 ~~~~~K~~aA~~A~~~V------~~gmvvGLGtGsTv~~~i~~L~~~ 42 (229)
T 1lk5_A 2 NVEEMKKIAAKEALKFI------EDDMVIGLGTGSTTAYFIKLLGEK 42 (229)
T ss_dssp CHHHHHHHHHHHHGGGC------CTTCEEEECCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHC------CCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 98999999999999647------999999958648999999999998
No 42
>3hhe_A Ribose-5-phosphate isomerase A; niaid, ssgcid, decode, SBRI, UW, structural genomics; HET: 5RP; 2.30A {Bartonella henselae str}
Probab=44.43 E-value=14 Score=15.93 Aligned_cols=42 Identities=21% Similarity=0.203 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHC
Q ss_conf 989999999999999999999728977999879864699998787630
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIIN 58 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~ 58 (234)
|.|++=+.+|..-++.+ +..-.|+|-+|||...+.+.|.++.
T Consensus 23 ~~e~~K~~~A~~A~~~V------~dG~~IGLGsGSTv~~~i~~L~~~~ 64 (255)
T 3hhe_A 23 NVQQLKKMAALKALEFV------EDDMRLGIGSGSTVNEFIPLLGERV 64 (255)
T ss_dssp CHHHHHHHHHHHHHTTC------CTTEEEEECCSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHC------CCCCEEEECCCHHHHHHHHHHHHHH
T ss_conf 99999999999999757------8998999787269999999999998
No 43
>1uj6_A Ribose 5-phosphate isomerase; enzyme-inhibitor complex, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: A5P; 1.74A {Thermus thermophilus} SCOP: c.124.1.4 d.58.40.1 PDB: 1uj5_A* 1uj4_A*
Probab=43.75 E-value=15 Score=15.86 Aligned_cols=39 Identities=18% Similarity=0.237 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 999999999999999999972897799987986469999878763
Q gi|254780505|r 13 KRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSII 57 (234)
Q Consensus 13 ~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~ 57 (234)
++.-+.+|...++.+ +....|+|-+|||...+.+.|.++
T Consensus 6 ~~~K~~aa~~A~~~V------~~gmvIGLGtGsTv~~~i~~L~~~ 44 (227)
T 1uj6_A 6 ESYKKEAAHAAIAYV------QDGMVVGLGTGSTARYAVLELARR 44 (227)
T ss_dssp HHHHHHHHHHHHTTC------CTTCEEEECCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC------CCCCEEEECCCHHHHHHHHHHHHH
T ss_conf 999999999999757------999999968637999999999986
No 44
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=43.69 E-value=15 Score=15.86 Aligned_cols=58 Identities=14% Similarity=0.060 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC--CCHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 89899999999999999999997289779998798--64699998787630795323899813210
Q gi|254780505|r 10 ENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGG--LTPRFFLEELSIINVDWHKVVVTLVDERF 73 (234)
Q Consensus 10 ~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGG--stp~~~y~~L~~~~~~w~kv~~~~~DER~ 73 (234)
.+.+.+...+.+.|.+.+++. ....+.++|||| ||... .|+.+-. -++++-..++.++
T Consensus 3 ~d~~~~i~~l~~~i~~~v~~~--g~k~vvvglSGGVDSav~A---~La~~a~-~~~v~~v~mp~~~ 62 (268)
T 1xng_A 3 KDYQKLIVYLCDFLEKEVQKR--GFKKVVYGLSGGLDSAVVG---VLCQKVF-KENAHALLMPSSV 62 (268)
T ss_dssp CCHHHHHHHHHHHHHHHHHHT--TCCCEEEECCSSHHHHHHH---HHHHHHH-GGGEEEEECCCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHC--CCCEEEEECCCCHHHHHHH---HHHHHHH-HHCCEEEECCCHH
T ss_conf 109999999999999999982--9981999786889999999---9999850-3226787135010
No 45
>1m0s_A Ribose-5-phosphate isomerase A; D-ribose 5-phosphate isomerase, northeast structural genomics consortium, IR21, structural genomics, PSI; HET: CIT; 1.90A {Haemophilus influenzae} SCOP: c.124.1.4 d.58.40.1
Probab=41.49 E-value=16 Score=15.65 Aligned_cols=40 Identities=20% Similarity=0.318 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 8999999999999999999972897799987986469999878763
Q gi|254780505|r 12 KKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSII 57 (234)
Q Consensus 12 ~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~ 57 (234)
.+++-+.+|+...+.+ ++.-.|+|-+|||...+.+.|.+.
T Consensus 3 ~~~~K~~aA~~A~~~i------k~gm~IGLGtGsTv~~~i~~L~~~ 42 (219)
T 1m0s_A 3 QLEMKKLAAQAALQYV------KADRIVGVGSGSTVNCFIEALGTI 42 (219)
T ss_dssp HHHHHHHHHHHHGGGC------CTTSEEEECCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHC------CCCCEEEECCHHHHHHHHHHHHHH
T ss_conf 8999999999999767------899999947569999999999875
No 46
>1kqp_A NAD+ synthase;, NH(3)-dependent NAD(+) synthetase; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=40.16 E-value=17 Score=15.52 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=23.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC--CCHHH
Q ss_conf 9899999999999999999997289779998798--64699
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGTASIALSGG--LTPRF 49 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGG--stp~~ 49 (234)
|+++..+.....+-+.++.. ....+.|+|||| |+-..
T Consensus 17 d~~~~i~~~v~~Lrd~v~~~--g~~~vVvGlSGGIDSav~A 55 (271)
T 1kqp_A 17 DPKQEIEDRVNFLKQYVKKT--GAKGFVLGISGGQDSTLAG 55 (271)
T ss_dssp CHHHHHHHHHHHHHHHHHHH--TCCEEEEECCSSHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHH--CCCEEEEECCCCHHHHHHH
T ss_conf 98999999999999999996--8981999798888899999
No 47
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=39.87 E-value=17 Score=15.49 Aligned_cols=20 Identities=10% Similarity=0.230 Sum_probs=14.2
Q ss_pred EEEEEEECHHHHHHHHHHHC
Q ss_conf 29999818348999999980
Q gi|254780505|r 189 FLALHIEGTQKKHVLEKAIS 208 (234)
Q Consensus 189 ~i~ll~~G~~K~~al~~~l~ 208 (234)
.-++++-|......+++.++
T Consensus 335 ~~V~lvGG~s~~p~v~~~i~ 354 (383)
T 1dkg_D 335 DDVILVGGQTRMPMVQKKVA 354 (383)
T ss_dssp CEEEEESGGGGSHHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHH
T ss_conf 99999895104589999999
No 48
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=38.78 E-value=18 Score=15.39 Aligned_cols=58 Identities=21% Similarity=0.124 Sum_probs=29.5
Q ss_pred EEECCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEEECCC--CCHHHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 9948989999999999999999999728--9779998798--64699998787630795323899813210
Q gi|254780505|r 7 YVAENKKRLAQKLAKKVAEQLSIGITNK--GTASIALSGG--LTPRFFLEELSIINVDWHKVVVTLVDERF 73 (234)
Q Consensus 7 ~i~~~~~~l~~~~a~~i~~~i~~~i~~~--~~~~i~lsGG--stp~~~y~~L~~~~~~w~kv~~~~~DER~ 73 (234)
..-=++++..+.+.+.| ++-+++. ..+.|+|||| ||.. ..|+.+.. .++....+..++
T Consensus 4 ~~~~~~~~~~~~iv~~i----~~~~~~~~~~~vvvglSGGVDSav~---A~L~~~a~--~~v~~v~m~~~~ 65 (249)
T 3fiu_A 4 VKDFSPKEYSQKLVNWL----SDSCMNYPAEGFVIGLSGGIDSAVA---ASLAVKTG--LPTTALILPSDN 65 (249)
T ss_dssp --CCCHHHHHHHHHHHH----HHHHHTTTCSEEEEECCSSHHHHHH---HHHHHHTT--SCEEEEECCCTT
T ss_pred CCCCCHHHHHHHHHHHH----HHHHHHCCCCEEEEECCCCHHHHHH---HHHHHHCC--CCCEEEECCCCC
T ss_conf 68799999999999999----9999980998299967798999999---99999829--875252368763
No 49
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=38.51 E-value=18 Score=15.36 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=53.7
Q ss_pred HHHCCCEEEEECCCCCHHHHHHHHHH--HCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECC----
Q ss_conf 97289779998798646999987876--307953238998132100356732027889997623567763214445----
Q gi|254780505|r 31 ITNKGTASIALSGGLTPRFFLEELSI--INVDWHKVVVTLVDERFVPLENLRSNQSFISKFFLQNKAQKASFIPLY---- 104 (234)
Q Consensus 31 i~~~~~~~i~lsGGstp~~~y~~L~~--~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ll~~~~~~~~~~~~~---- 104 (234)
++......||+|||.--..++..|.+ ...++..+.+.++|.-+=+ + .+.....+.+.. ....++.......
T Consensus 21 ~~~~~kvlva~SGG~DS~~Ll~~l~~l~~~~~~~~i~~~hv~h~~r~-~-s~~~~~~v~~~~-~~~~i~~~~~~~~~~~~ 97 (317)
T 1wy5_A 21 FSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRE-S-AERDEEFCKEFA-KERNMKIFVGKEDVRAF 97 (317)
T ss_dssp CSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSST-H-HHHHHHHHHHHH-HHHTCCEEEEECCHHHH
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC-C-HHHHHHHHHHHH-HHCCCCCCCCEEEEEEE
T ss_conf 79978599998182999999999999998779980999996189997-5-599999999999-96062422110234431
Q ss_pred --CCCCCHHHHHH--HHHHHHHHHCCCCCCEEEECC
Q ss_conf --88789899999--999999631587764899447
Q gi|254780505|r 105 --YPQKTIEEAIR--IANEKICQLIHFPFDVVVLGM 136 (234)
Q Consensus 105 --~~~~~~~~~~~--~~~~~~~~~~~~~~Dl~lLGi 136 (234)
....+.+..++ +|..........++|.+++|-
T Consensus 98 ~~~~~~~~e~~aR~~Ry~~l~~~~~~~~~~~i~~gH 133 (317)
T 1wy5_A 98 AKENRMSLEEAGRFLRYKFLKEILESEGFDCIATAH 133 (317)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHTTCSEEECCC
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 147998878999999998855323431266467613
No 50
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphatase, transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli K12} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=37.33 E-value=19 Score=15.25 Aligned_cols=88 Identities=14% Similarity=0.195 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCC--CCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 999999999997289779998798--646999987876307953238998132100356732027889997623567763
Q gi|254780505|r 21 KKVAEQLSIGITNKGTASIALSGG--LTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFISKFFLQNKAQKA 98 (234)
Q Consensus 21 ~~i~~~i~~~i~~~~~~~i~lsGG--stp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ll~~~~~~~ 98 (234)
+..++.|++.+. ++...++|||| ||..+ +|..+.+. ++++..++|-=+.-.+-. ..+.+.|-++...+.
T Consensus 215 ~~~i~~Ir~~Vg-~~kVi~~lSGGVDSsV~A---~Ll~kAig-~~l~cvfvD~GllRk~E~----~~v~~~~~~~~~~~~ 285 (525)
T 1gpm_A 215 DDAVARIREQVG-DDKVILGLSGGVDSSVTA---MLLHRAIG-KNLTCVFVDNGLLRLNEA----EQVLDMFGDHFGLNI 285 (525)
T ss_dssp HHHHHHHHHHHT-TCEEEEECCSSHHHHHHH---HHHHHHHG-GGEEEEEEECSCSCTTHH----HHHHHHHTTTTCCCE
T ss_pred HHHHHHHHHHHC-CCEEEEEECCCCCHHHHH---HHHHHHCC-CCEEEEEECCCCCCCCCH----HHHHHHHHHHCCCEE
T ss_conf 999999999848-870799724882169999---99987305-606899827876646729----999999998629707
Q ss_pred C-------EEECCCCCCCHHHHHHHH
Q ss_conf 2-------144458878989999999
Q gi|254780505|r 99 S-------FIPLYYPQKTIEEAIRIA 117 (234)
Q Consensus 99 ~-------~~~~~~~~~~~~~~~~~~ 117 (234)
. |...-.+-.+||+--+..
T Consensus 286 ~~vda~~~Fl~~L~gv~dPE~KRkiI 311 (525)
T 1gpm_A 286 VHVPAEDRFLSALAGENDPEAKRKII 311 (525)
T ss_dssp EEEECHHHHHHHHTTCCCHHHHHHHH
T ss_pred EEECCHHHHHHHHCCCCCHHHHHCCC
T ss_conf 99761888899754876888960400
No 51
>1x3l_A Hypothetical protein PH0495; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.10A {Pyrococcus horikoshii OT3}
Probab=36.46 E-value=16 Score=15.62 Aligned_cols=37 Identities=19% Similarity=0.094 Sum_probs=28.8
Q ss_pred ECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 48989999999999999999999728977999879864
Q gi|254780505|r 9 AENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLT 46 (234)
Q Consensus 9 ~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGst 46 (234)
++-+++-+-.+++.+++.+++. .++....+.+|||.|
T Consensus 98 HP~Pd~~sl~Aa~~il~~~~~l-~~~Dlvl~LISGGgS 134 (440)
T 1x3l_A 98 HPIPDEKSILGAKEALSILNRA-RENDIVFILISGGGS 134 (440)
T ss_dssp SSSCCHHHHHHHHHHHHHHHHC-CTTSEEEEEECTTHH
T ss_pred CCCCCHHHHHHHHHHHHHHHCC-CCCCEEEEECCCCCC
T ss_conf 9988877999999999999708-986636874048703
No 52
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCSG, PSI-2, midwest center for structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=35.68 E-value=20 Score=15.09 Aligned_cols=69 Identities=20% Similarity=0.213 Sum_probs=37.0
Q ss_pred EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE----ECCCCCCC
Q ss_conf 99813210035673202788999762356776321444588789899999999999631587764899----44788771
Q gi|254780505|r 66 VTLVDERFVPLENLRSNQSFISKFFLQNKAQKASFIPLYYPQKTIEEAIRIANEKICQLIHFPFDVVV----LGMGIDGH 141 (234)
Q Consensus 66 ~~~~DER~V~~~~~~Sn~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~l----LGiG~DGH 141 (234)
+.-+|| ++.-.-.++|..++.+.|.... .+...+... ..+.++-.+...+.+.. .|+++ ||.|+|-+
T Consensus 9 i~~GdE-ll~G~i~dtN~~~l~~~L~~~G-~~v~~~~~v--~D~~~~i~~~l~~~~~~-----~d~vittGGlGpt~dD~ 79 (172)
T 3kbq_A 9 ITVGNE-ILKGRTVNTNAAFIGNFLTYHG-YQVRRGFVV--MDDLDEIGWAFRVALEV-----SDLVVSSGGLGPTFDDM 79 (172)
T ss_dssp EEECHH-HHTTSSCCHHHHHHHHHHHHTT-CEEEEEEEE--CSCHHHHHHHHHHHHHH-----CSEEEEESCCSSSTTCC
T ss_pred EEECCC-CCCCEEEEHHHHHHHHHHHHCC-CCEEEEEEE--CCCHHHHHHHHHHHHHC-----CCEEEECCCCCCCCCCH
T ss_conf 997511-5177046619999999999879-917799998--98499999999998734-----88999817886787540
Q ss_pred EE
Q ss_conf 43
Q gi|254780505|r 142 TA 143 (234)
Q Consensus 142 ~A 143 (234)
|.
T Consensus 80 T~ 81 (172)
T 3kbq_A 80 TV 81 (172)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
No 53
>1xho_A Chorismate mutase; southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI, structural genomics; 2.20A {Clostridium thermocellum} SCOP: d.79.1.2
Probab=34.82 E-value=17 Score=15.45 Aligned_cols=65 Identities=15% Similarity=0.222 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHHHHHHH-HHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCC
Q ss_conf 9899999999999999999-9972897799987986469999878763079532389981321003
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSI-GITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERFVP 75 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~-~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~ 75 (234)
++++..++..+.+.+.++. .|+...-.++.++.-.--...|.+.+.+.+.|..|-++-.-|=-||
T Consensus 45 t~e~I~~At~eLl~eii~~N~l~~edIiSv~FT~T~DL~a~FPA~AaR~lG~~~VPLmc~~Em~V~ 110 (148)
T 1xho_A 45 TADEIVAETQKLLKEMAEKNGLEEDDIISIIFTVTKDLDAAFPAIAARNMGWTSTALMCMNEIDVP 110 (148)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECTTCCSSCTHHHHHHTTCTTSEEEEEECCCCT
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 999999999999999999759997898999998668545428899997679977350135547789
No 54
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomics consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=34.29 E-value=21 Score=14.95 Aligned_cols=12 Identities=8% Similarity=-0.058 Sum_probs=4.3
Q ss_pred CCCEEEEECCCC
Q ss_conf 897799987986
Q gi|254780505|r 34 KGTASIALSGGL 45 (234)
Q Consensus 34 ~~~~~i~lsGGs 45 (234)
.....+.-++|+
T Consensus 57 g~dviv~a~TGs 68 (228)
T 3iuy_A 57 GIDLIVVAQTGT 68 (228)
T ss_dssp TCCEEEECCTTS
T ss_pred CCCEEEECCCCC
T ss_conf 998899878999
No 55
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=33.63 E-value=19 Score=15.26 Aligned_cols=17 Identities=18% Similarity=0.317 Sum_probs=13.6
Q ss_pred CCCCCEEEECCCCCCCE
Q ss_conf 87764899447887714
Q gi|254780505|r 126 HFPFDVVVLGMGIDGHT 142 (234)
Q Consensus 126 ~~~~Dl~lLGiG~DGH~ 142 (234)
...+|++++|.|.+|.+
T Consensus 59 ~~~peilliGtG~~~~~ 75 (122)
T 2ab1_A 59 EKGVQTLVIGRGMSEAL 75 (122)
T ss_dssp TTCCSEEEEEECSSCCS
T ss_pred CCCCCEEEEECCCCCCC
T ss_conf 05999999928988665
No 56
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=31.52 E-value=23 Score=14.67 Aligned_cols=56 Identities=13% Similarity=0.076 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCC---CEEEEECCC--CCHHHH--HHHHHHHCC--CCCCEEEEECC
Q ss_conf 9899999999999999999997289---779998798--646999--987876307--95323899813
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKG---TASIALSGG--LTPRFF--LEELSIINV--DWHKVVVTLVD 70 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~---~~~i~lsGG--stp~~~--y~~L~~~~~--~w~kv~~~~~D 70 (234)
|+++..+.. ...|++-+++.+ .+.|+|||| |+.... .+++....+ .+++++++.+.
T Consensus 18 ~~~~~i~~~----v~~lrd~v~k~~~~k~vVlGLSGGVDSaV~A~L~~~Alg~~~v~~~~~~~~~~~v~ 82 (275)
T 1wxi_A 18 NAEEEIRRS----VDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVR 82 (275)
T ss_dssp CHHHHHHHH----HHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CHHHHHHHH----HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 999999999----99999999974998859997888788999999999999988763155553189997
No 57
>2cyj_A Hypothetical protein PH1505; conserved hypothetical protein, structural genomics, NPPSFA; HET: OCS; 1.50A {Pyrococcus horikoshii OT3} SCOP: c.103.1.1
Probab=31.40 E-value=23 Score=14.66 Aligned_cols=21 Identities=33% Similarity=0.524 Sum_probs=15.4
Q ss_pred HHHCCCCCCEEEECCCCCCCE
Q ss_conf 631587764899447887714
Q gi|254780505|r 122 CQLIHFPFDVVVLGMGIDGHT 142 (234)
Q Consensus 122 ~~~~~~~~Dl~lLGiG~DGH~ 142 (234)
..+.....|+.++|.|..+.+
T Consensus 54 ~~~l~~~peiliiGtG~~~~~ 74 (118)
T 2cyj_A 54 EKYLVEDFDVLLVGTGIYGML 74 (118)
T ss_dssp HTTTTSCCSEEEEEECTTCCC
T ss_pred HHHHCCCCCEEEEECCCCCCC
T ss_conf 998515998899935875555
No 58
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=31.20 E-value=23 Score=14.64 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH-HHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf 999999999999999999728977999879864699-998787630795323899813210
Q gi|254780505|r 14 RLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRF-FLEELSIINVDWHKVVVTLVDERF 73 (234)
Q Consensus 14 ~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~-~y~~L~~~~~~w~kv~~~~~DER~ 73 (234)
.+.+.+++.+.+.++.+++..+.-.|+++||-.--. +-+.|.+. ..-..+.++.-+-++
T Consensus 227 s~Q~~i~~~L~~~~~~a~~~~~~~~lvvsGGVaaN~~LR~~l~~~-~~~~~~~~~~p~~~~ 286 (540)
T 3en9_A 227 SLQEYAFSMLTEITERALAHTNKGEVMLVGGVAANNRLREMLKAM-CEGQNVDFYVPPKEF 286 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSEEEEESGGGGCHHHHHHHHHH-HHHTTCEEECCCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHH-HHHCCCEEECCCHHH
T ss_conf 999999999999999999970929799985499989999999999-987699998788787
No 59
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=30.81 E-value=24 Score=14.60 Aligned_cols=63 Identities=17% Similarity=0.148 Sum_probs=37.3
Q ss_pred EEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC------------------CHHHHHHHHHHHCCCCCCEEE
Q ss_conf 89994898999999999999999999972897799987986------------------469999878763079532389
Q gi|254780505|r 5 KLYVAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGL------------------TPRFFLEELSIINVDWHKVVV 66 (234)
Q Consensus 5 ~i~i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGs------------------tp~~~y~~L~~~~~~w~kv~~ 66 (234)
-+++.++.+.+.+ +.+.+ .......+.....+.||. ||..++..+....+...++..
T Consensus 103 alIl~PTreL~~q-v~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ilV~TP~~l~~~~~~~~~~l~~l~~ 177 (253)
T 1wrb_A 103 CLILAPTRELAIQ-ILSES----QKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKY 177 (253)
T ss_dssp EEEECSSHHHHHH-HHHHH----HHHHTTSSCCEEEECSSSCSHHHHHHHSSCCSEEEECHHHHHHHHHTTSBCCTTCCE
T ss_pred EEEECCCHHHHHH-HHHHH----HHHCCCCCCEEEEEECCCCHHHHHHHHCCCCEEEEECHHHHHHHHHCCCEECCCCEE
T ss_conf 9997577777530-24554----421257884699995797759999986269719997809988888369274563249
Q ss_pred EECCCC
Q ss_conf 981321
Q gi|254780505|r 67 TLVDER 72 (234)
Q Consensus 67 ~~~DER 72 (234)
+-+||-
T Consensus 178 lVlDEa 183 (253)
T 1wrb_A 178 IVLDEA 183 (253)
T ss_dssp EEEETH
T ss_pred EEEEHH
T ss_conf 986657
No 60
>3h1q_A Ethanolamine utilization protein EUTJ; structural genomics, PSI-2, protein structure initiative; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-2901}
Probab=28.60 E-value=26 Score=14.36 Aligned_cols=13 Identities=23% Similarity=0.141 Sum_probs=7.0
Q ss_pred CCEEEEECCCCCH
Q ss_conf 9779998798646
Q gi|254780505|r 35 GTASIALSGGLTP 47 (234)
Q Consensus 35 ~~~~i~lsGGstp 47 (234)
.++.|++|.|-|+
T Consensus 93 ~~~vi~VP~~~t~ 105 (272)
T 3h1q_A 93 FQAATAIPPGTVG 105 (272)
T ss_dssp CEEEEECCSCC--
T ss_pred CCEEEEECCCCCH
T ss_conf 8689998998998
No 61
>1o8b_A Ribose 5-phosphate isomerase; RPIA, PSI, protein structure initiative, MCSG, midwest center for structural genomics; HET: ABF; 1.25A {Escherichia coli} SCOP: c.124.1.4 d.58.40.1 PDB: 1lkz_A 1ks2_A* 3enq_A 3env_A* 3enw_A*
Probab=26.50 E-value=17 Score=15.46 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
Q ss_conf 999999999999999999972897799987986469999878763
Q gi|254780505|r 13 KRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSII 57 (234)
Q Consensus 13 ~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~ 57 (234)
+++-+.+|+..++.++ +.-.|+|=+|||...+.+.|.+.
T Consensus 4 ~~~K~~~a~~A~~~i~------~gmviGLGtGsTv~~~i~~L~~~ 42 (219)
T 1o8b_A 4 DELKKAVGWAALQYVQ------PGTIVGVGTGSTAAHFIDALGTM 42 (219)
T ss_dssp -------------------------CEEECCSCC-----------
T ss_pred HHHHHHHHHHHHHHCC------CCCEEEECCHHHHHHHHHHHHHH
T ss_conf 9999999999997479------99999868669999999999862
No 62
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase, RV2981C, structural genomics, TB structural genomics consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=26.38 E-value=3.6 Score=19.65 Aligned_cols=18 Identities=33% Similarity=0.484 Sum_probs=10.4
Q ss_pred CCEEEE----CCCCCCCEEEEC
Q ss_conf 648994----478877143402
Q gi|254780505|r 129 FDVVVL----GMGIDGHTASFF 146 (234)
Q Consensus 129 ~Dl~lL----GiG~DGH~ASlF 146 (234)
+|+++. +-|+||.+..++
T Consensus 110 ~D~vf~~lHG~~GEdG~iQ~ll 131 (373)
T 3lwb_A 110 VDVVFPVLHGPYGEDGTIQGLL 131 (373)
T ss_dssp CSEEEECCEETTEECCHHHHHH
T ss_pred CCEEEECCCCCCCCHHHHHHHH
T ss_conf 7889987768774346999999
No 63
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=25.05 E-value=30 Score=13.97 Aligned_cols=50 Identities=16% Similarity=0.140 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCC-----EEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 98999999999999999999972897-----799987986469999878763079
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGT-----ASIALSGGLTPRFFLEELSIINVD 60 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~-----~~i~lsGGstp~~~y~~L~~~~~~ 60 (234)
..+++.+.+.+.+...++++++..+. -.+.|.||+|-.++.+.+.+..++
T Consensus 301 eFe~l~~~l~~r~~~~i~~~L~~a~~~~~dId~V~LvGGssriP~V~~~l~~~f~ 355 (554)
T 1yuw_A 301 RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFN 355 (554)
T ss_dssp HHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 9998889999999999999999829998889789998983743779999999819
No 64
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATP, ATPase, PP-type, PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=24.73 E-value=31 Score=13.93 Aligned_cols=101 Identities=16% Similarity=0.073 Sum_probs=51.4
Q ss_pred HHHHCCCEEEEECCCCCHHHHHHHHHHHC--CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEC--CC
Q ss_conf 99728977999879864699998787630--795323899813210035673202788999762356776321444--58
Q gi|254780505|r 30 GITNKGTASIALSGGLTPRFFLEELSIIN--VDWHKVVVTLVDERFVPLENLRSNQSFISKFFLQNKAQKASFIPL--YY 105 (234)
Q Consensus 30 ~i~~~~~~~i~lsGGstp~~~y~~L~~~~--~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ll~~~~~~~~~~~~--~~ 105 (234)
.+..+....+|+|||.--..++..|.+.. ..--++.+.++|..+=+ ++.+ -...+++.. ....++...... ..
T Consensus 9 ~~~~~~~vlva~SGG~DS~~ll~~l~~~~~~~~~~~~~~~h~~h~~r~-~s~~-~~~~v~~~~-~~~~i~~~~~~~~~~~ 85 (433)
T 1ni5_A 9 QLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSA-NADA-WVTHCENVC-QQWQVPLVVERVQLAQ 85 (433)
T ss_dssp HHTTCSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCS-SHHH-HHHHHHHHH-HHTTCCEEEECCCCCC
T ss_pred HCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC-CHHH-HHHHHHHHH-HHCCCCEEEEEEECCC
T ss_conf 258998299998180999999999999897589981999998298895-5799-999999999-9759978999996478
Q ss_pred CCCCHHHHHH--HHHHHHHHHCCCCCCEEEEC
Q ss_conf 8789899999--99999963158776489944
Q gi|254780505|r 106 PQKTIEEAIR--IANEKICQLIHFPFDVVVLG 135 (234)
Q Consensus 106 ~~~~~~~~~~--~~~~~~~~~~~~~~Dl~lLG 135 (234)
.....+++++ +|.-..+.. ...|++++|
T Consensus 86 ~~~~~e~~aR~~Ry~~~~~~~--~~~~~i~~a 115 (433)
T 1ni5_A 86 EGLGIEAQARQARYQAFARTL--LPGEVLVTA 115 (433)
T ss_dssp SSSTTTTHHHHHHHHHHHHTC--CTTEEEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHH--CCCCEEEEE
T ss_conf 888879999999999878654--165703220
No 65
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helicase, alternative splicing, ATP-binding; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=23.59 E-value=32 Score=13.80 Aligned_cols=26 Identities=19% Similarity=0.188 Sum_probs=13.8
Q ss_pred CHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 46999987876307953238998132
Q gi|254780505|r 46 TPRFFLEELSIINVDWHKVVVTLVDE 71 (234)
Q Consensus 46 tp~~~y~~L~~~~~~w~kv~~~~~DE 71 (234)
||..+++.+.+..+.++++.++-+||
T Consensus 156 TPgrL~~~l~~~~~~~~~l~~lVlDE 181 (237)
T 3bor_A 156 TPGRVFDMLNRRYLSPKWIKMFVLDE 181 (237)
T ss_dssp CHHHHHHHHHTTSSCSTTCCEEEEES
T ss_pred CCHHHHHHHHCCCCCCCCCEEEECHH
T ss_conf 95679999975997656755774016
No 66
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A*
Probab=23.54 E-value=32 Score=13.79 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=27.5
Q ss_pred CCCEEEEECCCC-CHHHHHHH-HHHHC---CCCCCEEEEECCCCCCC
Q ss_conf 897799987986-46999987-87630---79532389981321003
Q gi|254780505|r 34 KGTASIALSGGL-TPRFFLEE-LSIIN---VDWHKVVVTLVDERFVP 75 (234)
Q Consensus 34 ~~~~~i~lsGGs-tp~~~y~~-L~~~~---~~w~kv~~~~~DER~V~ 75 (234)
+..+.||++||+ +.+..+.. |...- -.-.++.+.-+|.++.|
T Consensus 88 ~~PfIIGIaG~sgSGKST~a~~L~~lL~~~~~~~~v~~is~D~f~~~ 134 (312)
T 3aez_A 88 PVPFIIGVAGSVAVGKSTTARVLQALLARWDHHPRVDLVTTDGFLYP 134 (312)
T ss_dssp CCCEEEEEECCTTSCHHHHHHHHHHHHHTSTTCCCEEEEEGGGGBCC
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 99889998898987899999999999853078996599955555377
No 67
>2b8n_A Glycerate kinase, putative; TM1585, glycerate kinase (EC 2.7.1.31), structural genomics, joint center for structural genomics, JCSG; 2.53A {Thermotoga maritima MSB8} SCOP: c.118.1.1
Probab=23.48 E-value=20 Score=15.02 Aligned_cols=36 Identities=22% Similarity=0.258 Sum_probs=26.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
Q ss_conf 8989999999999999999999728977999879864
Q gi|254780505|r 10 ENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLT 46 (234)
Q Consensus 10 ~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGst 46 (234)
+-+++-+-.+++.+.+.++. +.++..+.+.+|||.|
T Consensus 103 P~Pd~~sl~Aa~~il~~~~~-~~~~Dlvl~LISGGgS 138 (429)
T 2b8n_A 103 PVPDENTIKTTRRVLELVDQ-LNENDTVLFLLSGGGS 138 (429)
T ss_dssp SSCCHHHHHHHHHHHHHHSS-CCTTCEEEEEECTTHH
T ss_pred CCCCHHHHHHHHHHHHHHHC-CCCCCEEEEEECCCCC
T ss_conf 99987799999999999962-8987769997258803
No 68
>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like hydrolase; 2.45A {Bacillus subtilis subsp}
Probab=23.00 E-value=33 Score=13.73 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCC
Q ss_conf 99999999999999972897799987986469999878763079
Q gi|254780505|r 17 QKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVD 60 (234)
Q Consensus 17 ~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~ 60 (234)
....+.+.+.+.+..+ +....+++++|+++..+.+.+.+..+.
T Consensus 43 ~~~~~~l~~~l~~~~~-~~gi~~~iaTGR~~~~~~~~~~~~~~~ 85 (289)
T 3gyg_A 43 QQDIYELEDYLEQKSK-DGELIIGWVTGSSIESILDKMGRGKFR 85 (289)
T ss_dssp HHHHHHHHHHHHHHHH-TTCEEEEEECSSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 4689999999999998-179889998899867789999984887
No 69
>2a7y_A Hypothetical protein RV2302/MT2359; anti-parallel beta sheet, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.34.6.3
Probab=22.84 E-value=29 Score=14.11 Aligned_cols=23 Identities=26% Similarity=0.544 Sum_probs=16.4
Q ss_pred CCCCCEEEECCCCCCCEEEECCCCCC
Q ss_conf 87764899447887714340278641
Q gi|254780505|r 126 HFPFDVVVLGMGIDGHTASFFPKGDT 151 (234)
Q Consensus 126 ~~~~Dl~lLGiG~DGH~ASlFP~~~~ 151 (234)
.+|+.+-+ -+|||.+..|||.+.
T Consensus 37 ~PPY~VRw---~ddGhe~lv~PGpDa 59 (83)
T 2a7y_A 37 SPPYVVRW---LVNGHETTVYPGSDA 59 (83)
T ss_dssp CSCEEEEE---TTTTEEEEECCCSSC
T ss_pred CCCEEEEE---CCCCEEEEEECCCCE
T ss_conf 99989885---799808889459995
No 70
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, acetylation, ATP-binding, calmodulin-binding, chaperone, cytoplasm; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=22.26 E-value=28 Score=14.22 Aligned_cols=20 Identities=20% Similarity=0.084 Sum_probs=8.5
Q ss_pred EEEECCCCCHHHHHHHHHHH
Q ss_conf 99987986469999878763
Q gi|254780505|r 38 SIALSGGLTPRFFLEELSII 57 (234)
Q Consensus 38 ~i~lsGGstp~~~y~~L~~~ 57 (234)
.+.|.||+|-.+..+.+.+.
T Consensus 337 ~V~LvGGssriP~v~~~l~~ 356 (675)
T 3d2f_A 337 FVEIIGGTTRIPTLKQSISE 356 (675)
T ss_dssp EEEEESGGGGSHHHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHH
T ss_conf 99996893653689999999
No 71
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=21.38 E-value=36 Score=13.52 Aligned_cols=44 Identities=14% Similarity=0.226 Sum_probs=29.5
Q ss_pred HHCCCEEEEECCCC-CHHHHHHHHHHHCC-CC---CCEEEEECCCCCCC
Q ss_conf 72897799987986-46999987876307-95---32389981321003
Q gi|254780505|r 32 TNKGTASIALSGGL-TPRFFLEELSIINV-DW---HKVVVTLVDERFVP 75 (234)
Q Consensus 32 ~~~~~~~i~lsGGs-tp~~~y~~L~~~~~-~w---~kv~~~~~DER~V~ 75 (234)
.++..+.||++||+ +.+..+..+.+..+ .| .++.++.+|.++.|
T Consensus 76 ~~k~P~IIGIaG~sgsGKSTla~~L~~lL~~~~~~~~v~lis~D~F~~~ 124 (308)
T 1sq5_A 76 GQRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHP 124 (308)
T ss_dssp -CCCCEEEEEEECTTSSHHHHHHHHHHHHTTSTTCCCEEEEEGGGGBCC
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 9999689999899988799999999999710169996599853515288
Done!