HHSEARCH alignment of GI: 254780505 and SCOP domain: d1fsfa_

Alignment

Probab=100.00  E-value=0  Score=341.22  Aligned_cols=226  Identities=20%  Similarity=0.216  Sum_probs=188.6

Q ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHHHHH----CCCCCCEEEEECCCCC-CCCC
Q ss_conf             289994898999999999999999999972-897799987986469999878763----0795323899813210-0356
Q gi|254780505|r    4 YKLYVAENKKRLAQKLAKKVAEQLSIGITN-KGTASIALSGGLTPRFFLEELSII----NVDWHKVVVTLVDERF-VPLE   77 (234)
Q Consensus         4 ~~i~i~~~~~~l~~~~a~~i~~~i~~~i~~-~~~~~i~lsGGstp~~~y~~L~~~----~~~w~kv~~~~~DER~-V~~~   77 (234)
                      +|+++++|.+++++.+|++|++.|++.... ++.|+|+||||+||..+|+.|++.    ++||+|++||++|||| +|.+
T Consensus         1 M~iii~~~~~e~~~~aA~~i~~~I~~~~~~~~~~f~ialsGGsTP~~~y~~L~~~~~~~~i~w~~v~~~~~DEr~v~p~~   80 (266)
T d1fsfa_           1 MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKE   80 (266)
T ss_dssp             CEEEECSSHHHHHHHHHHHHHHHHHHHCCBTTBCEEEEECCSSTTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSSCTT
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHEEEEECCCCCCCCCC
T ss_conf             90799599999999999999999997330469977999789824999999999777515997356699968830358998


Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCEEECCCC-CCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEEC
Q ss_conf             73202788999762356776321444588-78989999999999963158776489944788771434027864100221
Q gi|254780505|r   78 NLRSNQSFISKFFLQNKAQKASFIPLYYP-QKTIEEAIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIAL  156 (234)
Q Consensus        78 ~~~Sn~~~~~~~ll~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~  156 (234)
                      +++||+.+++++|+++...+..+++.+.. ..+.++.++.|++.+...  ++||+++||||+|||+||||||++......
T Consensus        81 ~~~s~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~Dl~lLGiG~DGH~AslfP~~~~~~~~~  158 (266)
T d1fsfa_          81 HPESYYSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSY--GKIHLFMGGVGNDGHIAFNEPASSLASRTR  158 (266)
T ss_dssp             STTSHHHHHHHHTGGGSCCCGGGEECCCTTCSSHHHHHHHHHHHHHHH--CCCSEEEECCCTTSCCTTCCTTCCTTCCSE
T ss_pred             CHHHHHHHHHHHHHCCCCCCHHHEECCCCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCCEEEECCCCCCCCCCCE
T ss_conf             367789998752000035658874315677665899999999998743--885699943577863553056663445523


Q ss_pred             ----C--CC-CCCCEEEECCCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf             ----5--66-7431899538998721587087888415829999818348999999980898320608999618999689
Q gi|254780505|r  157 ----D--TH-TPRSVIAIKDYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLE  229 (234)
Q Consensus       157 ----~--~~-~~~~~~~~~~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~~~~Pas~ll~~~~~~~~  229 (234)
                          .  .. ....+.....+.+|++|||||++.|++|++|+++++|++|+++++++++|+.+.+|||++|+.|+++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~p~~riTltl~~i~~ak~i~ll~~G~~Ka~al~~~l~~~~~~~~Pas~l~~h~~~~~~  238 (266)
T d1fsfa_         159 IKTLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEGCVNHMWTISCLQLHPKAIMV  238 (266)
T ss_dssp             EEECCHHHHHTTTTTTTTCTTTSCSEEEECCHHHHHTSSCEEEEECSGGGHHHHHHHHTSCCCTTSGGGGGGGSSSEEEE
T ss_pred             EEEECHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEE
T ss_conf             68604166776522156678989965344589999522058999758789999999973899875762986549987999


Q ss_pred             EE
Q ss_conf             98
Q gi|254780505|r  230 VH  231 (234)
Q Consensus       230 V~  231 (234)
                      +.
T Consensus       239 ~D  240 (266)
T d1fsfa_         239 CD  240 (266)
T ss_dssp             EC
T ss_pred             EE
T ss_conf             84

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: NagB-like
domain: Glucosamine 6-phosphate deaminase/isomerase NagB
species: Escherichia coli [TaxId: 562]