RPSBLAST alignment of GI: 254780505 and protein with PDBid: 1y89
>1y89_A DEVB protein; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; HET: 2PE; 2.00A {Vibrio cholerae o1 biovar eltor str} Length = 238
Score = 112 bits (280), Expect = 9e-26
Identities = 49/226 (21%), Positives = 88/226 (38%), Gaps = 17/226 (7%)
Query: 16 AQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELS----IINVDWHKVVVTLVDE 71
A + K +A+ + I+LSGG TP+ + L+ ++ W + DE
Sbjct: 10 ADAVVKSLADDMLAYSQQGQPVHISLSGGSTPKMLFKLLASQPYANDIQWKNLHFWWGDE 69
Query: 72 RFVPLENLRSNQSFISKFFLQNKAQKASFIPLYYPQKTIEEAIRIANEKICQLIHF---- 127
R V ++ SN + A I + + + + +I
Sbjct: 70 RCVAPDDAESNYGEANALLFSKINMPAQNIHRILGENEPQAEAERFAQAMAHVIPTENGT 129
Query: 128 -PFDVVVLGMGIDGHTASFFPKGDTLSIALDTHTPRSVIAIKDYTSNEQRMTMTFSALHD 186
FD ++LG+G DGHTAS FP + SV+A S + R++ T L
Sbjct: 130 PVFDWILLGVGADGHTASLFPGQTDYA-----DANLSVVASHPE-SGQLRVSKTAKVLQA 183
Query: 187 AQFLALHIEGTQKKHVLEKAISGDDALEMPIRAILWNAQSPLEVHW 232
A+ ++ + G K ++E+ + ++P A ++ S W
Sbjct: 184 AKRISYLVLGAGKAEIVEQIHTTPAE-QLPYPAAKIHSTSG-VTEW 227