HHsearch alignment for GI: 254780506 and conserved domain: PRK00258

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed.
Probab=98.15  E-value=0.00016  Score=52.21  Aligned_cols=224  Identities=18%  Similarity=0.254  Sum_probs=136.8

Q ss_pred             EECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCC-C
Q ss_conf             967986789999999999998397000024741112266999999852312212588834688711378898606874-3
Q gi|254780506|r   39 LVGNDPASCSYVSAKTRMAKHCGFHSVQYNFPVDISQIDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSIIQSIVPE-K  117 (306)
Q Consensus        39 lvGddpaS~~Yv~~K~K~a~~lGI~~~~~~l~~~~se~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~~~I~p~-K  117 (306)
T Consensus        10 liG~pi~hS~SP~ihn~~f~~~gl~~~Y~~~--~v~~~~l~~~i~~l~~-~~~~G~nVT~P~K~~v--~~~ld~l~~~A~   84 (275)
T PRK00258         10 VIGNPIAHSKSPFIHNAAAKQLGLDGEYLAF--LVPLDDLEDAVRGFFA-LGGKGANVTVPFKEAA--FALADELSERAR   84 (275)
T ss_pred             EECCCCCCCCCHHHHHHHHHHCCCCCEEEEE--ECCHHHHHHHHHHHHH-CCCCEEEECHHHHHHH--HHCCCHHHHHHH
T ss_conf             9888824130799999999986999389988--7888899999997776-6987799668989999--862460217788


Q ss_pred             CHHHCCHH-H-HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC-CEEECCCC
Q ss_conf             51321553-3-888730477887567667999999998678772001289961644203468999986204-53312467
Q gi|254780506|r  118 DVDGLHVV-N-AGKVMIGDFTTGLVPCTPAGAILLIEQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNA-TVTMAHSK  194 (306)
Q Consensus       118 DVDGl~~~-N-~g~l~~~~~~~~~~PcTp~av~~ll~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~a-tVti~hs~  194 (306)
T Consensus        85 ~igavNTi~~~~g~-l~G~------NTD~~G~~~~l~~~-~~~~~~k~vlIlGaGG-aarai~~al~~~g~~~i~i~nR~  155 (275)
T PRK00258         85 LAGAVNTLVLEDGR-LIGD------NTDGIGFVRDLERL-GLDLKGKRILLLGAGG-AARAVILPLLELGVAEITIVNRT  155 (275)
T ss_pred             HHCCEEEEEEECCE-EEEE------ECCHHHHHHHHHHH-CCCCCCCEEEEECCCC-HHHHHHHHHHHCCCCEEEEEECC
T ss_conf             74554589955998-9998------36778999999984-8785687599988871-07999999997699989999589


Q ss_pred             C-------------------CCHHHHHHHCCEEEEECCC---CC--CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECC
Q ss_conf             6-------------------5347764223573652244---32--1220104766269983111112676688568417
Q gi|254780506|r  195 T-------------------KNLPEICRTADILVVAVGR---PR--MVQVDWIKTGSLVIDVGINRINSPQLGKTVLVGD  250 (306)
Q Consensus       195 T-------------------~~l~~~~~~ADivIsAvG~---p~--~i~~~~vk~gavvIDvGi~~~~~~~~~~~~~~GD  250 (306)
T Consensus       156 ~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~diiInaTp~Gm~~~~~~~~~~~~~~~~~v~D~~Y~P~~T-----------  224 (275)
T PRK00258        156 VERAEELAELFGEGVQALGLDELAGELADFDLIINTTSAGMSGELPPLPASLLRPGTVVYDMIYGPLPT-----------  224 (275)
T ss_pred             HHHHHHHHHHHCCCCCEEEHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCC-----------
T ss_conf             999999999835676275378754304457779965777777886511387648886699866579999-----------


Q ss_pred             CCHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             75678731440089869868689999999999999998688985
Q gi|254780506|r  251 VADECKSVVGAITPVPGGVGPMTIAMLMANTVIAAYRSLGMKSP  294 (306)
Q Consensus       251 vd~~~~~~a~~iTPVPGGVGp~Tva~L~~N~v~aa~~~~~~~~~  294 (306)
T Consensus       225 -~ll~~a~~~G~~~i~G------l~Mli~Qa~~qf~iwtg~~~~  261 (275)
T PRK00258        225 -PFLAWAKAQGARTVDG------LGMLVHQAAEAFELWTGVRPD  261 (275)
T ss_pred             -HHHHHHHHCCCEEECC------HHHHHHHHHHHHHHHHCCCCC
T ss_conf             -9999999882948577------999999999999998499999