HHsearch alignment for GI: 254780506 and conserved domain: PRK02255
>PRK02255 putrescine carbamoyltransferase; Provisional.
Probab=97.08 E-value=0.037 Score=35.87 Aligned_cols=187 Identities=17% Similarity=0.154 Sum_probs=113.9
Q ss_pred EECHHHHHHHHHHHHHHHHHHHHHH--CCC-----CCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCC--CC
Q ss_conf 0053899999999999999999983--699-----97599999679867899999999999983970000247411--12
Q gi|254780506|r 4 LIDGKVVASVLTDKIAESVAFLKKE--TGV-----QVGLAVVLVGNDPASCSYVSAKTRMAKHCGFHSVQYNFPVD--IS 74 (306)
Q Consensus 4 iLdGk~iA~~i~~~lk~~i~~l~~~--~g~-----~P~LavIlvGddpaS~~Yv~~K~K~a~~lGI~~~~~~l~~~--~s 74 (306)
T Consensus 7 ~L~~~Dls~~ei~~ll~~A~~~K~~~~~~~~~~~L~gk~v~~lF-~epSTRTR~S-FE~A~~~LGg~~i~l~~~~~sl~k 84 (341)
T PRK02255 7 FIDTQDYSKEEILYMIDLGLKLKEAIKNGAYPQLLKNKSLGMIF-EQPSTRTRVS-FETAMTQLGGHAQYLAPGQIHLGG 84 (341)
T ss_pred CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-CCCCCHHHHH-HHHHHHHCCCCEEECCCCCCCCCC
T ss_conf 47222199999999999999998777558887557999899996-7897107999-999999859979982765445788
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCHHH-HHHHHHH
Q ss_conf 266999999852312212588834688711378898606874351321553388873047788756766799-9999998
Q gi|254780506|r 75 QIDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSIIQSIVPEKDVDGLHVVNAGKVMIGDFTTGLVPCTPAG-AILLIEQ 153 (306)
Q Consensus 75 e~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~~~PcTp~a-v~~ll~~ 153 (306)
T Consensus 85 gEsl~DT~~vls~~--~D~iviR~~~~~~~--~~la~~~----~v---PVIN------g~-~~~~HPtQaL~Dl~Ti~e~ 146 (341)
T PRK02255 85 HESIEDTARVLSRM--VDIIMARVLRHQTV--VELAKYA----TV---PVIN------GM-SDYNHPTQELGDVFTMLEH 146 (341)
T ss_pred CCCHHHHHHHHHHH--CCEEEEEECCCHHH--HHHHHHC----CC---CEEE------CC-CCCCCCHHHHHHHHHHHHH
T ss_conf 76699999999863--78899993484679--9999867----99---9897------89-9887727899989999998
Q ss_pred H-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEECCCC-------------------------CCCHHHHHHHCCE
Q ss_conf 6-7877200128996164420346899998620453312467-------------------------6534776422357
Q gi|254780506|r 154 F-KGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNATVTMAHSK-------------------------TKNLPEICRTADI 207 (306)
Q Consensus 154 y-~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~atVti~hs~-------------------------T~~l~~~~~~ADi 207 (306)
T Consensus 147 ~~~~~~l~glkva~vGD~~nv~~S~~~~~~~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDv 226 (341)
T PRK02255 147 LPAGKKLEDCKVVFVGDATQVCSSLMFITTKMGMDFVHFGPKGFQLPEEHLAIARENCEVSGGSVLVTDDADEAVKDADF 226 (341)
T ss_pred HHCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCE
T ss_conf 60179845656887268534488999999975998999879746899999999999999739979999788887257987
Q ss_pred EEE
Q ss_conf 365
Q gi|254780506|r 208 LVV 210 (306)
Q Consensus 208 vIs 210 (306)
T Consensus 227 vyt 229 (341)
T PRK02255 227 IYT 229 (341)
T ss_pred EEE
T ss_conf 851