HHsearch alignment for GI: 254780506 and conserved domain: PRK08192

Probab=94.79  E-value=0.43  Score=28.45  Aligned_cols=150  Identities=20%  Similarity=0.220  Sum_probs=85.9

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCC---HHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
Q ss_conf             986789999999999998397000024741112---26699999985231221258883468871137889860687435
Q gi|254780506|r   42 NDPASCSYVSAKTRMAKHCGFHSVQYNFPVDIS---QIDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSIIQSIVPEKD  118 (306)
Q Consensus        42 ddpaS~~Yv~~K~K~a~~lGI~~~~~~l~~~~s---e~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~~~I~p~KD  118 (306)
T Consensus        52 ~kpSTRTR~SFE-~A~~~LGg~~~~~~~~~~s~l~kGEsi~DTarvls~y--~D~iviR~~~~~~~--~e~a~~s----~  122 (338)
T PRK08192         52 FEPSTRTRVSFG-CAFNLLGGHVRETTGMASSSLSKGESLYDTARVLSTY--SDVIAMRHPDAYSV--KEFAEGS----R  122 (338)
T ss_pred             CCCCCCHHHHHH-HHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHHCC--CCEEEEECCCHHHH--HHHHHCC----C
T ss_conf             289744699999-9999849986025783324467897899999998615--98999988510048--9987418----9


Q ss_pred             HHHCCHHHHHHHHHCCCCCCCCCCCHHH-HHHHHHHH--CCCCCCCCEEEEECC---CCCCHHHHHHHHHHH-CCCEEEC
Q ss_conf             1321553388873047788756766799-99999986--787720012899616---442034689999862-0453312
Q gi|254780506|r  119 VDGLHVVNAGKVMIGDFTTGLVPCTPAG-AILLIEQF--KGCDLSGQHAVVIGR---SNLFGKPMGQLLLSR-NATVTMA  191 (306)
Q Consensus       119 VDGl~~~N~g~l~~~~~~~~~~PcTp~a-v~~ll~~y--~~i~l~Gk~vvVvGr---s~~VG~Pla~lL~~~-~atVti~  191 (306)
T Consensus       123 ---vPVINa-----~~-~~~~HPtQaLaDl~Ti~e~~~~~~~~l~glkia~vGD~~~~r~~-~s~~~ll~~~~g~~~~l~  192 (338)
T PRK08192        123 ---VPVING-----GD-GSNEHPTQALLDLFTIQKELAHAGRGIDGMHIAMVGDLKFGRTV-HSLSRLLCMYKNISFTLI  192 (338)
T ss_pred             ---CCEEEC-----CC-CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHH-HHHHHHHHHHCCCEEEEE
T ss_conf             ---878967-----88-98768278988899999998740898557489997677756389-999999996559889998


Q ss_pred             CCCC---------------------CCHHHHHHHCCEEEE
Q ss_conf             4676---------------------534776422357365
Q gi|254780506|r  192 HSKT---------------------KNLPEICRTADILVV  210 (306)
Q Consensus       192 hs~T---------------------~~l~~~~~~ADivIs  210 (306)
T Consensus       193 ~P~~~~~p~~~~~~~~~~g~~i~~~~d~~~a~~~aDvvy~  232 (338)
T PRK08192        193 SPKELAMPDYVISDIENAGHKITITDQLEGNLDKADILYL  232 (338)
T ss_pred             CCCCCCCCHHHHHHHHHCCCEEEEEECHHHHHCCCEEEEE
T ss_conf             9987789999999999849949997288897236849995