HHsearch alignment for GI: 254780506 and conserved domain: PRK09310
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed.
Probab=97.64 E-value=0.0014 Score=45.65 Aligned_cols=205 Identities=16% Similarity=0.246 Sum_probs=126.0
Q ss_pred HHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCC-CHHHCCHH--HHH
Q ss_conf 999999983970000247411122669999998523122125888346887113788986068743-51321553--388
Q gi|254780506|r 52 AKTRMAKHCGFHSVQYNFPVDISQIDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSIIQSIVPEK-DVDGLHVV--NAG 128 (306)
Q Consensus 52 ~K~K~a~~lGI~~~~~~l~~~~se~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~~~I~p~K-DVDGl~~~--N~g 128 (306)
T Consensus 233 lHN~~f~~~gl~~~Y~~~~v--~~~~l~~f~~~~~-~~~f~G~sVTiP~K~~i--~~~lDeld~~A~~iGAVNTiv~~~g 307 (477)
T PRK09310 233 SHNPLFSQLSLNCPYIKLPL--TPQELPEFFSLIR-DLPFLGLSVTMPLKTAV--LDFLDKLDPSVKLCGSCNTLVFRNG 307 (477)
T ss_pred HHHHHHHHCCCCCEEEEEEC--CHHHHHHHHHHHH-HCCCCEEEECCCCHHHH--HHHHCCCCHHHHHHCCEEEEEEECC
T ss_conf 99999997799967788856--8889999999875-37998899880779999--9871528988997376658998899
Q ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCC------------
Q ss_conf 87304778875676679999999986787720012899616442034689999862045331246765------------
Q gi|254780506|r 129 KVMIGDFTTGLVPCTPAGAILLIEQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNATVTMAHSKTK------------ 196 (306)
Q Consensus 129 ~l~~~~~~~~~~PcTp~av~~ll~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~atVti~hs~T~------------ 196 (306)
T Consensus 308 kl-~G~NTD------~~G~~~~L~~~-~~~~~~~~~~vlGaGG-aarAi~~~l~~~g~~i~I~nRt~~ka~~La~~~~~~ 378 (477)
T PRK09310 308 KI-LGYNTD------GEGLFSLLKQK-NISLNNQHVAIVGAGG-AAKAIATTLARQGAELLIFNRTKAHAEALASRCQGK 378 (477)
T ss_pred EE-EEEECC------HHHHHHHHHHH-CCCCCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCC
T ss_conf 89-998257------89999999970-9994446224424750-799999999867997999979989999999874886
Q ss_pred --CHHH--HHHHCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCCCH-HHHHHCCEECCCCCCCCH
Q ss_conf --3477--64223573652244321220104766269983111112676688568417756-787314400898698686
Q gi|254780506|r 197 --NLPE--ICRTADILVVAVGRPRMVQVDWIKTGSLVIDVGINRINSPQLGKTVLVGDVAD-ECKSVVGAITPVPGGVGP 271 (306)
Q Consensus 197 --~l~~--~~~~ADivIsAvG~p~~i~~~~vk~gavvIDvGi~~~~~~~~~~~~~~GDvd~-~~~~~a~~iTPVPGGVGp 271 (306)
T Consensus 379 ~~~~~~l~~~~~~dliIn~tp-~~~~~~~~~~--~~v~D~vY~P~~T------------~lL~~A~~-~G~~~v~G---- 438 (477)
T PRK09310 379 AFPLGSLPELHTIDIIINCLP-PSVTIPEAFP--PVVVDINTLPKHS------------PYTQYARK-HGSSIIYG---- 438 (477)
T ss_pred EEEHHHHHHCCCCCEEEECCC-CCCCCCCCCC--CEEEEEECCCCCC------------HHHHHHHH-CCCEEECC----
T ss_conf 753566531677898998989-9877753128--8899996388479------------99999998-75988785----
Q ss_pred HHHHHHHHHHHHHHHHHCCCC
Q ss_conf 899999999999999986889
Q gi|254780506|r 272 MTIAMLMANTVIAAYRSLGMK 292 (306)
Q Consensus 272 ~Tva~L~~N~v~aa~~~~~~~ 292 (306)
T Consensus 439 --leMLv~Qa~~qFelW~g~~ 457 (477)
T PRK09310 439 --YEMFAEQALLQFRLWFPTF 457 (477)
T ss_pred --HHHHHHHHHHHHHHHCCCC
T ss_conf --9999999999998537999