HHsearch alignment for GI: 254780506 and conserved domain: PRK09496
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed.
Probab=92.52 E-value=0.43 Score=28.44 Aligned_cols=82 Identities=12% Similarity=0.203 Sum_probs=55.1
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCC--------------------CC-
Q ss_conf 567667999999998678772001289961644203468999986204533124676--------------------53-
Q gi|254780506|r 139 LVPCTPAGAILLIEQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNATVTMAHSKT--------------------KN- 197 (306)
Q Consensus 139 ~~PcTp~av~~ll~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~atVti~hs~T--------------------~~- 197 (306)
T Consensus 210 ~vig~~~~i~~~~~~~g~~~~~~~~v~I~Ggg~-ig~~la~~L-~~~~~v~iIe~d~~~~~~la~~l~~~~Vi~GD~td~ 287 (455)
T PRK09496 210 FFVAASEHIRRVMSELGRLEKPVKRIMIAGGGN-IGLYLAKLL-EKGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQ 287 (455)
T ss_pred EEEECHHHHHHHHHHHCCCCCCCCEEEEECCCH-HHHHHHHHH-HCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCCH
T ss_conf 999257769999998586546665189987869-999999987-408838997089899999997478539997887688
Q ss_pred --H-HHHHHHCCEEEEECCC--CCCCCCCC
Q ss_conf --4-7764223573652244--32122010
Q gi|254780506|r 198 --L-PEICRTADILVVAVGR--PRMVQVDW 222 (306)
Q Consensus 198 --l-~~~~~~ADivIsAvG~--p~~i~~~~ 222 (306)
T Consensus 288 ~~L~e~gi~~aD~~ia~T~~De~Ni~~~ll 317 (455)
T PRK09496 288 ELLEEEGIDEADAFIALTNDDEANILSSLL 317 (455)
T ss_pred HHHHHHCCCCCCEEEEECCCHHHHHHHHHH
T ss_conf 999763645564899903881889999999