HHsearch alignment for GI: 254780506 and conserved domain: PRK12548

>PRK12548 shikimate 5-dehydrogenase; Provisional.
Probab=98.03  E-value=0.00069  Score=47.90  Aligned_cols=215  Identities=20%  Similarity=0.292  Sum_probs=132.9

Q ss_pred             HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCC-CCHHHCCHH--
Q ss_conf             99999999998397000024741112266999999852312212588834688711378898606874-351321553--
Q gi|254780506|r   49 YVSAKTRMAKHCGFHSVQYNFPVDISQIDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSIIQSIVPE-KDVDGLHVV--  125 (306)
Q Consensus        49 Yv~~K~K~a~~lGI~~~~~~l~~~~se~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~~~I~p~-KDVDGl~~~--  125 (306)
T Consensus        24 SP~ihn~~~~~~gi~~~Y~~~--~v~~~~l~~~~~~~~-~~~~~G~nVTiP~K~~v--~~~~d~l~~~A~~iGAvNTi~~   98 (289)
T PRK12548         24 SPAMYNYSFQKAGLDYAYLAF--DVPKEKVADAITAIR-TFNMRGANVTMPCKSEV--AKLMDELSPAARIIGAVNTIVN   98 (289)
T ss_pred             CHHHHHHHHHHCCCCCEEEEE--ECCHHHHHHHHHHHH-HCCCCEEEECHHHHHHH--HHHHCCCCHHHHHHCCEEEEEC
T ss_conf             499999999986999299978--778889999999887-47998899726139999--9975649988998405247773


Q ss_pred             HHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC-EEECCCC------CC--
Q ss_conf             38887304778875676679999999986787720012899616442034689999862045-3312467------65--
Q gi|254780506|r  126 NAGKVMIGDFTTGLVPCTPAGAILLIEQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNAT-VTMAHSK------TK--  196 (306)
Q Consensus       126 N~g~l~~~~~~~~~~PcTp~av~~ll~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~at-Vti~hs~------T~--  196 (306)
T Consensus        99 ~~g~l-~G~NT------D~~Gf~~~L~~~-~~~~~~k~vlIlGaGG-aa~ai~~~l~~~g~~~i~i~nr~~~~~~ra~~~  169 (289)
T PRK12548         99 DDGKL-TGHIT------DGLGFVRNLREH-GVDVKGKKLTIIGAGG-AATAIQVQCALDGAKEITIFNIKDDFYERAEQT  169 (289)
T ss_pred             CCCEE-EEECC------CHHHHHHHHHHH-CCCCCCCEEEEEECCH-HHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
T ss_conf             39989-98758------779999999980-9996777479995216-799999999976998899996881488999999


Q ss_pred             ----------------------CHHHHHHHCCEEEEEC--CC-C-----CCCCCCCCCCCCEEEEEEEEECCCCCCCCCE
Q ss_conf             ----------------------3477642235736522--44-3-----2122010476626998311111267668856
Q gi|254780506|r  197 ----------------------NLPEICRTADILVVAV--GR-P-----RMVQVDWIKTGSLVIDVGINRINSPQLGKTV  246 (306)
Q Consensus       197 ----------------------~l~~~~~~ADivIsAv--G~-p-----~~i~~~~vk~gavvIDvGi~~~~~~~~~~~~  246 (306)
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliINaT~~Gm~p~~~~~~~~~~~~~~~~~~v~D~vY~P~~T-------  242 (289)
T PRK12548        170 VAKIKEEVPACIVHVYDLNDTEKLNAEIATSDILVNATLVGMHPNEDETPIKDTSVFRKDLVVADTVYNPKKT-------  242 (289)
T ss_pred             HHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCC-------
T ss_conf             9999845877647985143166665543226744533565668775568887866738897899831388478-------


Q ss_pred             EECCCCH-HHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             8417756-7873144008986986868999999999999999868898555
Q gi|254780506|r  247 LVGDVAD-ECKSVVGAITPVPGGVGPMTIAMLMANTVIAAYRSLGMKSPKF  296 (306)
Q Consensus       247 ~~GDvd~-~~~~~a~~iTPVPGGVGp~Tva~L~~N~v~aa~~~~~~~~~~~  296 (306)
T Consensus       243 -----~ll~~A~~-~G~~~i~G------l~MLv~Qa~~~FelwtG~~~p~~  281 (289)
T PRK12548        243 -----KLLEDAEA-AGCKTVGG------LGMLLWQGAEAYKLFTGKDMPVS  281 (289)
T ss_pred             -----HHHHHHHH-CCCEEECH------HHHHHHHHHHHHHHHHCCCCCHH
T ss_conf             -----99999998-82968572------99999999999999839999999