HHsearch alignment for GI: 254780506 and conserved domain: PRK12829

Probab=93.46  E-value=0.092  Score=33.13  Aligned_cols=71  Identities=23%  Similarity=0.245  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHCCCCCCCCEEEEEC-CCCCCHHHH-HHHHHHHCCCEEECCCCCCCHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf             999999998678772001289961-644203468-999986204533124676534776422357365224432122010
Q gi|254780506|r  145 AGAILLIEQFKGCDLSGQHAVVIG-RSNLFGKPM-GQLLLSRNATVTMAHSKTKNLPEICRTADILVVAVGRPRMVQVDW  222 (306)
Q Consensus       145 ~av~~ll~~y~~i~l~Gk~vvVvG-rs~~VG~Pl-a~lL~~~~atVti~hs~T~~l~~~~~~ADivIsAvG~p~~i~~~~  222 (306)
T Consensus       127 ~~~~p~m~~~-~---~G~~IinisS~~~~~~~~~~~~Y~asKaal~----~ltr~lA~E~a~~gIrVNaV-~PG~i~T~~  197 (264)
T PRK12829        127 RAAVPLLRAS-G---HGGVIIALSSVAGRLGYPGRTPYAASKWAVV----GLVKSLAIELGPLGIRVNAI-LPGIVRGPR  197 (264)
T ss_pred             HHHHHHHHHC-C---CCCEEEEEECHHHCCCCCCCHHHHHHHHHHH----HHHHHHHHHHHHHCEEEEEE-EECCCCCCH
T ss_conf             9999999873-9---9808999802654779988678999999999----99999999985409499988-628888802


Q ss_pred             CC
Q ss_conf             47
Q gi|254780506|r  223 IK  224 (306)
Q Consensus       223 vk  224 (306)
T Consensus       198 ~~  199 (264)
T PRK12829        198 MR  199 (264)
T ss_pred             HH
T ss_conf             54