HHsearch alignment for GI: 254780506 and conserved domain: TIGR01772
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent; InterPro: IPR010097 This entry represents the NAD-dependent malate dehydrogenase found in eukaryotes and certain gamma proteobacteria. The enzyme is involved in the citric acid cycle as well as the glyoxalate cycle. Several isoforms exist in eukaryotes. In Saccharomyces cereviseae, for example, there are cytoplasmic, mitochondrial and peroxisomal forms. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities.; GO: 0030060 L-malate dehydrogenase activity, 0006108 malate metabolic process.
Probab=91.24 E-value=0.25 Score=30.05 Aligned_cols=65 Identities=26% Similarity=0.450 Sum_probs=46.4
Q ss_pred EEEEECCCCCCHHHHHHHHHHH--CCC-------EEEC--------------------CCC-----------------CC
Q ss_conf 2899616442034689999862--045-------3312--------------------467-----------------65
Q gi|254780506|r 163 HAVVIGRSNLFGKPMGQLLLSR--NAT-------VTMA--------------------HSK-----------------TK 196 (306)
Q Consensus 163 ~vvVvGrs~~VG~Pla~lL~~~--~at-------Vti~--------------------hs~-----------------T~ 196 (306)
T Consensus 1 KVAVLGA~GGIGQpLSLLLK~~Lp~~slkesnrsvthi~L~LYDi~~ea~~GVa~DLSHI~T~~~v~gf~~~~~~hkrdP 80 (379)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQLPQVSLKESNRSVTHIELSLYDIKGEAAEGVAADLSHIDTAASVKGFSGEEGDHKRDP 80 (379)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
T ss_conf 96898558642146899998517645752036505677765303456656764313442178645704468888865660
Q ss_pred CHHHHHHHCCEEEEECCC---CCCCCCCCCCCCC
Q ss_conf 347764223573652244---3212201047662
Q gi|254780506|r 197 NLPEICRTADILVVAVGR---PRMVQVDWIKTGS 227 (306)
Q Consensus 197 ~l~~~~~~ADivIsAvG~---p~~i~~~~vk~ga 227 (306)
T Consensus 81 ~l~~~L~~advVvIPAGVPRKPGMtRDDLF~~NA 114 (379)
T TIGR01772 81 ALENALKGADVVVIPAGVPRKPGMTRDDLFNVNA 114 (379)
T ss_pred CHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCH
T ss_conf 1488862795899817878875567556755041