HHsearch alignment for GI: 254780506 and conserved domain: cd01079
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=100.00 E-value=0 Score=378.57 Aligned_cols=160 Identities=24% Similarity=0.406 Sum_probs=143.3
Q ss_pred CCCCHHHCCHHHHHHHHHCC-------CCCCCCCCCHHHHHHHHHHH--------CCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 74351321553388873047-------78875676679999999986--------7877200128996164420346899
Q gi|254780506|r 115 PEKDVDGLHVVNAGKVMIGD-------FTTGLVPCTPAGAILLIEQF--------KGCDLSGQHAVVIGRSNLFGKPMGQ 179 (306)
Q Consensus 115 p~KDVDGl~~~N~g~l~~~~-------~~~~~~PcTp~av~~ll~~y--------~~i~l~Gk~vvVvGrs~~VG~Pla~ 179 (306)
T Consensus 1 P~KDVDGlhp~N~G~L~~~~~~~~~~~~~~~~iPCTP~gv~~LL~~~~i~~~~~~yg~~l~Gk~vvVIGRS~iVGkPla~ 80 (197)
T cd01079 1 PHKDVEGLSHKYIFNLYHNIRFLDPENRKKSILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAA 80 (197)
T ss_pred CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHH
T ss_conf 99775688978876676176533445677778778699999999971855433235778899989998987315488999
Q ss_pred HHHHHCCCEEE---------------------CCCCCCCHHHHHHHCCEEEEECCCCCC-CCCCCCCCCCEEEEEEEEEC
Q ss_conf 99862045331---------------------246765347764223573652244321-22010476626998311111
Q gi|254780506|r 180 LLLSRNATVTM---------------------AHSKTKNLPEICRTADILVVAVGRPRM-VQVDWIKTGSLVIDVGINRI 237 (306)
Q Consensus 180 lL~~~~atVti---------------------~hs~T~~l~~~~~~ADivIsAvG~p~~-i~~~~vk~gavvIDvGi~~~ 237 (306)
T Consensus 81 LL~~~~ATVt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDIvI~avg~p~~~i~~~~vk~GaivIDvg~~~- 159 (197)
T cd01079 81 LLANDGARVYSVDINGIQVFTRGESIRHEKHHVTDEEAMTLDCLSQSDVVITGVPSPNYKVPTELLKDGAICINFASIK- 159 (197)
T ss_pred HHHHCCCEEEEECCCCEEEEECCCCCCCEEEEECCCCHHHHHHCCCCCEEEECCCCCCCCCCHHHCCCCCEEEEECCCC-
T ss_conf 9973899677503442146404665221245641421005654234799998878776656675544896899816843-
Q ss_pred CCCCCCCCEEECCCCHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 26766885684177567873144008986986868999999999999999868
Q gi|254780506|r 238 NSPQLGKTVLVGDVADECKSVVGAITPVPGGVGPMTIAMLMANTVIAAYRSLG 290 (306)
Q Consensus 238 ~~~~~~~~~~~GDvd~~~~~~a~~iTPVPGGVGp~Tva~L~~N~v~aa~~~~~ 290 (306)
T Consensus 160 ------------~~~~~v~~~a~~itPv---VGPmTvAmLl~Ntv~~~~~~h~ 197 (197)
T cd01079 160 ------------NFEPSVKEKASIYVPS---IGKVTIAMLLRNLLRLYHNQHH 197 (197)
T ss_pred ------------CCCHHHHHCCCEECCC---CCHHHHHHHHHHHHHHHHHHHC
T ss_conf ------------6674563003133898---8989999999999999998509