HHsearch alignment for GI: 254780506 and conserved domain: pfam02423
>pfam02423 OCD_Mu_crystall Ornithine cyclodeaminase/mu-crystallin family. This family contains the bacterial Ornithine cyclodeaminase enzyme EC:4.3.1.12, which catalyses the deamination of ornithine to proline. This family also contains mu-Crystallin the major component of the eye lens in several Australian marsupials, mRNA for this protein has also been found in human retina.
Probab=97.44 E-value=0.00059 Score=48.36 Aligned_cols=90 Identities=13% Similarity=0.206 Sum_probs=66.2
Q ss_pred CCCCCH--HHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCCEEEEECCCC-
Q ss_conf 567667--99999999867877200128996164420346899998620453312467653477642235736522443-
Q gi|254780506|r 139 LVPCTP--AGAILLIEQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNATVTMAHSKTKNLPEICRTADILVVAVGRP- 215 (306)
Q Consensus 139 ~~PcTp--~av~~ll~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~atVti~hs~T~~l~~~~~~ADivIsAvG~p- 215 (306)
T Consensus 134 iiGaG~QA~~~l~al~~v--~~--i~~v~v~~r~~~~~~~f~~~~~~~~~~v~~~~----~~~~av~~ADIIvtaT~s~~ 205 (312)
T pfam02423 134 IIGAGAQAEFQAEALSAV--LP--IEEIRIYDRDPEAAEKFARNLQGKGFEIVACT----SAEEAVEGADIVVTVTPDKE 205 (312)
T ss_pred EECCCHHHHHHHHHHHHH--CC--CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEC----CHHHHHHCCCEEEEEECCCC
T ss_conf 964625389999999961--99--76899996898999999999983499659948----99999714998999735997
Q ss_pred -CCCCCCCCCCCCEEEEEEEEE
Q ss_conf -212201047662699831111
Q gi|254780506|r 216 -RMVQVDWIKTGSLVIDVGINR 236 (306)
Q Consensus 216 -~~i~~~~vk~gavvIDvGi~~ 236 (306)
T Consensus 206 ~P~~~~~~l~~G~hv~~vGs~~ 227 (312)
T pfam02423 206 FPILKAEWVKPGVHINAVGADC 227 (312)
T ss_pred CCCCCHHHCCCCCEEEEECCCC
T ss_conf 7500778838986899726999