HHsearch alignment for GI: 254780507 and conserved domain: PRK05697

>PRK05697 flagellar basal body-associated protein FliL-like protein; Validated.
Probab=99.56  E-value=8e-14  Score=99.91  Aligned_cols=99  Identities=15%  Similarity=0.275  Sum_probs=85.2

Q ss_pred             CCCCCCCCCCC-EEEEEECCCCEEEEEEEEEEEEECHHHHHH---HHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHH
Q ss_conf             67754111585-078764068623699999999827579976---44399999999998458234530301369899999
Q gi|254780507|r   40 IKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK  115 (176)
Q Consensus        40 ~~~~eyVkl~~-i~VPvI~dg~v~~yv~~~l~~eV~~~~~~~---~~~p~i~D~~~~~L~~~~~~D~~~~~~~~l~~lk~  115 (176)
T Consensus        28 ~~~~~Y~~l~P~fV~N~~~~g~rlrylqv~v~Lmv~d~~~~~~le~H~PlIR~~li~lls~qt~~~l~t~eGr--e~Lr~  105 (135)
T PRK05697         28 APKYAYYGLEPDIVTNYISDGKKLGYVKIDVELMVKDPDDLAAVEHHDPLIRNALVELLGQQTEDKVKSLTGR--EEIRQ  105 (135)
T ss_pred             CCCEEEEECCCCEEEECCCCCCCEEEEEEEEEEEECCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHCCHHHH--HHHHH
T ss_conf             8855899658997996578986046999999999878756899997076899999999854998796598789--99999


Q ss_pred             HHHHHHHHHH----CCCCEEEEEEEEECC
Q ss_conf             9999999995----867145523201113
Q gi|254780507|r  116 KIKEDLNSRL----GSQFISEVLIDELNY  140 (176)
Q Consensus       116 ~I~~~vN~~l----G~~~V~DVLi~~f~y  140 (176)
T Consensus       106 e~l~~vn~~l~~etG~~~Ve~VlFT~fV~  134 (135)
T PRK05697        106 ECLKQVNELLEQETGKPLVVDLLFTKYLY  134 (135)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEECCEE
T ss_conf             99999999998631866434675000344