HHsearch alignment for GI: 254780507 and conserved domain: PRK07021
>PRK07021 fliL flagellar basal body-associated protein FliL; Reviewed.
Probab=99.86 E-value=1.4e-20 Score=138.91 Aligned_cols=134 Identities=14% Similarity=0.155 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEECHHHHHHH--
Q ss_conf 999999999999999999974023544444556345677541115850787640686236999999998275799764--
Q gi|254780507|r 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY-- 81 (176)
Q Consensus 4 lii~gvwi~~Vtlga~Yf~~~~~~~~~~~~~~~~~~~~~~eyVkl~~i~VPvI~dg~v~~yv~~~l~~eV~~~~~~~~-- 81 (176)
T Consensus 17 ii~~~~lll~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~pvf~~l~~f~VNL~~~~~~~ryLqv~i~L~~~d~~~~~~l~ 96 (159)
T PRK07021 17 ILLILITLAAAAGAGYSYWLSKQGAAHAAAKAEPAPPPAPVFFPLETFTVNLQPDDDADRVLYIGLTLRLKDEATRERLK 96 (159)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCCEEEEEEEEEEECCHHHHHHHH
T ss_conf 89999999999999999995477666666666677889875773475179713899864599999999976877898998
Q ss_pred -HHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC----CEEEEEEEEEC
Q ss_conf -43999999999984582345303013698999999999999995867----14552320111
Q gi|254780507|r 82 -LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISEVLIDELN 139 (176)
Q Consensus 82 -~~p~i~D~~~~~L~~~~~~D~~~~~~~~l~~lk~~I~~~vN~~lG~~----~V~DVLi~~f~ 139 (176)
T Consensus 97 ~~~P~Ird~ll~lls~~~~~dL~t~eG--k~~L~~ei~~~vn~~l~~~~~~~~V~~VlFT~FV 157 (159)
T PRK07021 97 EYLPEVRSRLLLLLSRKHAAELATEEG--KQKLAAEIKETLEQPLVPGQPKQVVTDVLFTAFI 157 (159)
T ss_pred HCCHHHHHHHHHHHHCCCHHHHCCHHH--HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
T ss_conf 607478999999985499889649889--9999999999999987456888834589214406