HHsearch alignment for GI: 254780507 and conserved domain: PRK07718
>PRK07718 fliL flagellar basal body-associated protein FliL; Reviewed.
Probab=99.83 E-value=1.9e-19 Score=132.32 Aligned_cols=133 Identities=11% Similarity=0.211 Sum_probs=103.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEEEEECHHHHHH
Q ss_conf 99999999999999999999997402354444455634567754111585078764068623699999999827579976
Q gi|254780507|r 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS 80 (176)
Q Consensus 1 Miklii~gvwi~~Vtlga~Yf~~~~~~~~~~~~~~~~~~~~~~eyVkl~~i~VPvI~dg~v~~yv~~~l~~eV~~~~~~~ 80 (176)
T Consensus 5 li~Imiiil~~l~l~G~~a~~~~~~~~~~~~~~~~p~~~e~~~~~~~~~e~~t-NL~~~---rylkv~i~le~~~~~~~~ 80 (142)
T PRK07718 5 LIKIMLIILIVIALLGTAALVVVIGSSGEEKQSGEPTIDEIVESSVEVPEITT-NLKSG---NFIRISFKIETDSKKAKE 80 (142)
T ss_pred CHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHCCCCCCCCCEEE-ECCCC---CEEEEEEEEEECCHHHHH
T ss_conf 06699999999999999987246435775647888980330355401585168-75999---679999999988988997
Q ss_pred HHH---HHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEC
Q ss_conf 443---99999999998458234530301369899999999999999586714552320111
Q gi|254780507|r 81 YLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 (176)
Q Consensus 81 ~~~---p~i~D~~~~~L~~~~~~D~~~~~~~~l~~lk~~I~~~vN~~lG~~~V~DVLi~~f~ 139 (176)
T Consensus 81 El~~r~pqIrD~Ii~~Ls~kt~~dl~~~~G--k~~Lk~ei~~~iN~~l~~G~V~~VyfT~fV 140 (142)
T PRK07718 81 ELEKRDFQVKDIIISELAEMNAEDLEGKKG--LEKLKEQLKEKINNLMQEGKVKKVYITSFI 140 (142)
T ss_pred HHHHCCHHHHHHHHHHHHCCCHHHHCCHHH--HHHHHHHHHHHHHHHCCCCCEEEEEEEEEE
T ss_conf 766514256999999997499979459778--999999999999864678946999988766