HHsearch alignment for GI: 254780507 and conserved domain: PRK08455

>PRK08455 fliL flagellar basal body-associated protein FliL; Reviewed.
Probab=99.82  E-value=2.3e-19  Score=131.89  Aligned_cols=92  Identities=15%  Similarity=0.238  Sum_probs=80.2

Q ss_pred             CCCCCCEEEEEECCCCEEEEEEEEEEEEECHHHHHHH---HHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             1115850787640686236999999998275799764---4399999999998458234530301369899999999999
Q gi|254780507|r   45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL  121 (176)
Q Consensus        45 yVkl~~i~VPvI~dg~v~~yv~~~l~~eV~~~~~~~~---~~p~i~D~~~~~L~~~~~~D~~~~~~~~l~~lk~~I~~~v  121 (176)
T Consensus        84 ~~~l~~f~v-Nl~~~~~~rylq~~i~l~~~~~~~~~~~~~~~p~ird~ii~~ls~~~~~~l~~~~G--k~~Lr~ei~~~i  160 (180)
T PRK08455         84 MYPLDPFTV-NLLSQSGRRYLKTSISLELSNELLKPELDKKDPVIRDTIIRILSSKTVEEVSTNKG--KERLKDEIVGKL  160 (180)
T ss_pred             CCCCCCEEE-ECCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHH--HHHHHHHHHHHH
T ss_conf             545677799-77789986389999999986888899999866999999999996499989509778--999999999999


Q ss_pred             HHHHCCCCEEEEEEEEEC
Q ss_conf             999586714552320111
Q gi|254780507|r  122 NSRLGSQFISEVLIDELN  139 (176)
Q Consensus       122 N~~lG~~~V~DVLi~~f~  139 (176)
T Consensus       161 n~~l~~~~V~~V~Ft~fV  178 (180)
T PRK08455        161 NEFLIDGFIKNVFFTDFV  178 (180)
T ss_pred             HHHHCCCCEEEEEEEEEE
T ss_conf             987367955799842417