BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780508|ref|YP_003064921.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter asiaticus str. psy62] (123 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780508|ref|YP_003064921.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter asiaticus str. psy62] gi|254040185|gb|ACT56981.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter asiaticus str. psy62] Length = 123 Score = 253 bits (645), Expect = 9e-66, Method: Compositional matrix adjust. Identities = 123/123 (100%), Positives = 123/123 (100%) Query: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS Sbjct: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK Sbjct: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120 Query: 121 TTT 123 TTT Sbjct: 121 TTT 123 >gi|315122295|ref|YP_004062784.1| hypothetical protein CKC_02735 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495697|gb|ADR52296.1| hypothetical protein CKC_02735 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 123 Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 91/121 (75%), Positives = 101/121 (83%) Query: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60 MST +DYRIQTVLKRVI VIDNENKNLK N QFDIS SND+KGRCLHELSV ++SC+ IS Sbjct: 1 MSTLNDYRIQTVLKRVIEVIDNENKNLKTNKQFDISASNDNKGRCLHELSVFLISCKYIS 60 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120 DH EQIR L EKLALNSSLLESYL+AARVVADLFKK+LQ+ID DGTY +G + K Sbjct: 61 CDHSEQIRILQEKLALNSSLLESYLNAARVVADLFKKRLQDIDTDGTYSNGCSGFFDTSK 120 Query: 121 T 121 T Sbjct: 121 T 121 >gi|325291973|ref|YP_004277837.1| hypothetical protein AGROH133_04008 [Agrobacterium sp. H13-3] gi|325059826|gb|ADY63517.1| hypothetical protein AGROH133_04008 [Agrobacterium sp. H13-3] Length = 122 Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 53/107 (49%), Positives = 76/107 (71%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEISW 61 S+D+RI++VL R+ +IDNEN N+ + QFD +SN HK RCL+EL++L EEI+ Sbjct: 5 SNDHRIKSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLFRDTPHEEIAA 64 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 HL+Q++ + KLA N+S +E++L+A R VADL K +QE D DGTY Sbjct: 65 GHLDQVQGIKSKLATNASRVEAHLNAVRAVADLLKTAIQEADTDGTY 111 >gi|159184376|ref|NP_353611.2| hypothetical protein Atu0585 [Agrobacterium tumefaciens str. C58] gi|159139689|gb|AAK86396.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 122 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 51/107 (47%), Positives = 77/107 (71%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEISW 61 S+D+RIQ+VL R+ +IDNEN N+ + QFD +SN HK RCL+EL++L+ E+I+ Sbjct: 5 SNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHEDIAA 64 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 ++EQ++ + KLA N++ +E++L+A R VADL K +QE D DGTY Sbjct: 65 GYMEQVKGIKSKLATNATRVEAHLNAVRAVADLLKNAIQEADTDGTY 111 >gi|86356341|ref|YP_468233.1| hypothetical protein RHE_CH00690 [Rhizobium etli CFN 42] gi|86280443|gb|ABC89506.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 121 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 5 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 64 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 65 SHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111 >gi|116250511|ref|YP_766349.1| hypothetical protein RL0739 [Rhizobium leguminosarum bv. viciae 3841] gi|115255159|emb|CAK06233.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 144 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 28 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 87 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 88 AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 134 >gi|327193071|gb|EGE59983.1| hypothetical protein RHECNPAF_1760072 [Rhizobium etli CNPAF512] Length = 143 Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 27 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 86 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 87 AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 133 >gi|222147600|ref|YP_002548557.1| hypothetical protein Avi_0777 [Agrobacterium vitis S4] gi|221734588|gb|ACM35551.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 121 Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 51/108 (47%), Positives = 77/108 (71%), Gaps = 2/108 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S+DYRI+TVL R+ ++DNEN + N+ QFD +SN HK RCL+EL++L + EI+ Sbjct: 4 VSNDYRIKTVLGRLEMIVDNENHRIGNDPQFDFKVSNAHKSRCLYELTMLFRDTDPKEIA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +++EQ+ L +KLALN+ +E++LDA R VAD+ + +Q+ D DGTY Sbjct: 64 INYVEQMHGLKKKLALNARRVEAHLDAVRAVADILRSAVQDADNDGTY 111 >gi|218463242|ref|ZP_03503333.1| hypothetical protein RetlK5_29129 [Rhizobium etli Kim 5] Length = 121 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 5 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 64 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 65 AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111 >gi|190890393|ref|YP_001976935.1| hypothetical protein RHECIAT_CH0000768 [Rhizobium etli CIAT 652] gi|218509488|ref|ZP_03507366.1| hypothetical protein RetlB5_19249 [Rhizobium etli Brasil 5] gi|218516755|ref|ZP_03513595.1| hypothetical protein Retl8_25658 [Rhizobium etli 8C-3] gi|190695672|gb|ACE89757.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 121 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 5 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 64 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 65 AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111 >gi|241203135|ref|YP_002974231.1| hypothetical protein Rleg_0381 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857025|gb|ACS54692.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 121 Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/108 (48%), Positives = 76/108 (70%), Gaps = 2/108 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS L + E++ Sbjct: 4 VSNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSTLFRDTDPAELA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111 >gi|209547957|ref|YP_002279874.1| hypothetical protein Rleg2_0349 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533713|gb|ACI53648.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 121 Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 51/108 (47%), Positives = 77/108 (71%), Gaps = 2/108 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S++YRI++VL R+ +IDNEN + ++ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 4 VSNEYRIKSVLGRLEMIIDNENTRIGSDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111 >gi|222084896|ref|YP_002543425.1| hypothetical protein Arad_0925 [Agrobacterium radiobacter K84] gi|221722344|gb|ACM25500.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 122 Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 49/107 (45%), Positives = 76/107 (71%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI--LSCEEISW 61 S+DYRI++VL R+ +IDNEN + ++ +FD+ +SN HK RCL+EL++L + E++ Sbjct: 5 SNDYRIKSVLGRLEMIIDNENNRIGSDPEFDLKVSNAHKSRCLYELTMLFRDTNPAELAV 64 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 H+EQ+ L +KL LN+ +E++L+A R VAD+ K +Q DADGTY Sbjct: 65 THIEQLHGLKKKLTLNARRVEAHLEAVRAVADILKNAVQNADADGTY 111 >gi|227820886|ref|YP_002824856.1| hypothetical protein NGR_c03050 [Sinorhizobium fredii NGR234] gi|227339885|gb|ACP24103.1| hypothetical protein NGR_c03050 [Sinorhizobium fredii NGR234] Length = 122 Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 2/108 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEIS 60 S D RIQ VL R+ +IDNEN + + +FDI SN HK RCL+EL++L + EIS Sbjct: 5 ASHDLRIQNVLGRLEMIIDNENSRIGVDPKFDIKTSNAHKSRCLYELTMLHRDTAAGEIS 64 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 Q R L +KL LN+ +E++L+A R V DL K Q+ DADG Y Sbjct: 65 PSFASQTRHLRQKLKLNAQKVEAHLEAVRSVVDLLKTAAQDADADGIY 112 >gi|15964443|ref|NP_384796.1| hypothetical protein SMc03072 [Sinorhizobium meliloti 1021] gi|307311585|ref|ZP_07591226.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C] gi|307318940|ref|ZP_07598371.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|15073620|emb|CAC45262.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306895354|gb|EFN26109.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|306899602|gb|EFN30231.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C] Length = 122 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 2/108 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEIS 60 S+D RIQ VL R+ +IDNEN + + +FD+ SN HK RCL+EL++L EIS Sbjct: 5 ASNDLRIQNVLGRLEMIIDNENSRIGADPEFDLKTSNAHKSRCLYELTMLHRDAGPGEIS 64 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 Q R L KL +N+ + ++L+A R V DL K Q+ DADG Y Sbjct: 65 PAFAAQTRHLRSKLQVNAQKVAAHLEAVRSVVDLLKTAAQDADADGIY 112 >gi|150395514|ref|YP_001325981.1| hypothetical protein Smed_0287 [Sinorhizobium medicae WSM419] gi|150027029|gb|ABR59146.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 122 Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 2/108 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEIS 60 S+D RIQ VL R+ +IDNEN + + +FD+ SN HK RCL+EL++L EIS Sbjct: 5 ASNDLRIQNVLGRLEMIIDNENSRIGADPEFDLKTSNAHKSRCLYELTMLHRDAGPGEIS 64 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 Q R L KL +N+ + ++L+A R V DL K Q+ DADG Y Sbjct: 65 PAFAAQTRHLRNKLEVNAQKVAAHLEAVRSVVDLLKTAAQDADADGIY 112 >gi|163758043|ref|ZP_02165131.1| hypothetical protein HPDFL43_00420 [Hoeflea phototrophica DFL-43] gi|162284332|gb|EDQ34615.1| hypothetical protein HPDFL43_00420 [Hoeflea phototrophica DFL-43] Length = 126 Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 38/107 (35%), Positives = 67/107 (62%), Gaps = 2/107 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI--LSCEEISW 61 + D RIQ VL R+ VID ENK L +D+ SN K RCL+++++L + +++ Sbjct: 9 TQDQRIQLVLSRLETVIDAENKALGVERDYDLKRSNALKSRCLYDMTMLFKNIRPGQLAP 68 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 H ++ ++ KL +N + +++++DA R +AD+ K+ + E +ADGTY Sbjct: 69 GHKRRLDSVRAKLDVNQAKVKAHMDAVRDIADMIKESVAESEADGTY 115 >gi|110632629|ref|YP_672837.1| hypothetical protein Meso_0268 [Mesorhizobium sp. BNC1] gi|110283613|gb|ABG61672.1| conserved hypothetical protein [Chelativorans sp. BNC1] Length = 132 Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEE--ISWDHLEQIR 68 +++ R+ I+ E L+ N +FDI SN K R LHELS+++ + E + DH E + Sbjct: 25 SLITRIEESIEAETVALRANPRFDIKASNARKSRYLHELSMVVRTIREGDLGADHREALV 84 Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 L KL N + L ++L A VA L + +++ ADGTY Sbjct: 85 RLRTKLTQNEAALRAHLSAVGEVATLLQDAIRQAQADGTY 124 >gi|319781644|ref|YP_004141120.1| hypothetical protein Mesci_1917 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167532|gb|ADV11070.1| hypothetical protein Mesci_1917 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 141 Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 2/105 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66 + ++ R+ V++ E ++N + +D+ SN K R L+EL+ + E + H E Sbjct: 30 LAAIIGRIEEVVEEETAGIRNATNYDLKASNARKSRYLYELTRAMKGGSEAEFLEQHREG 89 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 + L +KLA N + + ++L A VA L + +Q + DGTY G Sbjct: 90 LTRLRQKLAKNEAAILAHLSAVNEVASLLRHAIQRAETDGTYSAG 134 >gi|13472617|ref|NP_104184.1| hypothetical protein mlr2965 [Mesorhizobium loti MAFF303099] gi|14023363|dbj|BAB49970.1| mlr2965 [Mesorhizobium loti MAFF303099] Length = 141 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66 + ++ R+ V++ E +++++ +D+ SN K R L+EL+ + E + H E Sbjct: 30 LAAIIGRIEEVVEEETAGIRSDTSYDLKASNARKSRYLYELTRAMKGGSEAEFLEQHREG 89 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 + L +KLA N + + ++L A VA L + +Q + DGTY G Sbjct: 90 LTRLRQKLAKNEAAILAHLSAVNEVAGLLRSAIQRAETDGTYSAG 134 >gi|260466577|ref|ZP_05812765.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|259029583|gb|EEW30871.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] Length = 140 Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 2/102 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66 + ++ R+ V++ E +++++ +D+ SN K R L+EL+ + E+ + H E Sbjct: 30 LAAIIGRIEEVVEEETAGIRSDTSYDLKASNARKSRYLYELTRAMKGGSEVEFLEQHREG 89 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 + L +KLA N + + ++L A VA L + +Q + DGTY Sbjct: 90 LTRLRQKLARNEAAILAHLSAVNEVAGLLRTAIQRAETDGTY 131 >gi|300024565|ref|YP_003757176.1| hypothetical protein Hden_3060 [Hyphomicrobium denitrificans ATCC 51888] gi|299526386|gb|ADJ24855.1| hypothetical protein Hden_3060 [Hyphomicrobium denitrificans ATCC 51888] Length = 163 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI--LSCEEISWDHLEQIR 68 V+ R+ +D E L + +FD SND K + L +L+ + L +++ D ++ Sbjct: 53 AVIARIEGYLDEETHALDKSLKFDFKTSNDRKSQGLLDLNQALRRLQKSDVNADLQLRLA 112 Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 T EKL++N + +LDA + +A + +Q ++DGTY Sbjct: 113 TFREKLSVNLRKIRLHLDAVKEIAAMLSDAIQNAESDGTY 152 >gi|27381959|ref|NP_773488.1| hypothetical protein bll6848 [Bradyrhizobium japonicum USDA 110] gi|27355129|dbj|BAC52113.1| bll6848 [Bradyrhizobium japonicum USDA 110] Length = 170 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 10/102 (9%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI-----LSCE-EISWDHLEQ 66 ++R+ ++++ E L + D + K R + E L+ L E EI+ E+ Sbjct: 64 IRRLESIVEEETVALATGKKIDFDDFSARKSRSMLEFVRLMRARMHLGSEVEIT----EE 119 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 ++ L EKL N S+LE + DA R VA + K +++ D+DGTY Sbjct: 120 VQRLREKLERNRSILEMHYDAVREVATIIVKAIKDADSDGTY 161 >gi|115523204|ref|YP_780115.1| hypothetical protein RPE_1183 [Rhodopseudomonas palustris BisA53] gi|115517151|gb|ABJ05135.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 159 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 2/100 (2%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDH--LEQIR 68 + ++R+ ID E + L+ + D + K R L EL+ + E D + ++ Sbjct: 53 SAIERLKTTIDEETEKLEIRAATDFDGFSRRKNRGLLELTRAVRLAENGGVDPRLVPELT 112 Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 L L N + L+ +LDA R V+ + K +QE+++DGTY Sbjct: 113 RLRASLVRNQAALQIHLDAVREVSAIIAKSIQEVESDGTY 152 >gi|328545477|ref|YP_004305586.1| hypothetical protein SL003B_3861 [polymorphum gilvum SL003B-26A1] gi|326415217|gb|ADZ72280.1| hypothetical protein SL003B_3861 [Polymorphum gilvum SL003B-26A1] Length = 122 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 2/102 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHEL--SVLILSCEEISWDHLEQ 66 + + R AV++ E + L+ + D+ K + L +L + L E + EQ Sbjct: 12 LHAAIARAQAVVEAETEALRRRAGIDLKSFEYRKSQALLDLDRARRSLPSEGLDRRTSEQ 71 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 + L +L N +LL +++ A R +AD+ K + E D+DGTY Sbjct: 72 LGMLRMRLDENMALLSTHMSAVREIADVIAKAMLEADSDGTY 113 >gi|90422635|ref|YP_531005.1| hypothetical protein RPC_1122 [Rhodopseudomonas palustris BisB18] gi|90104649|gb|ABD86686.1| hypothetical protein RPC_1122 [Rhodopseudomonas palustris BisB18] Length = 162 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 8/102 (7%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWD-----HLEQ 66 ++R+ A ID E + L+ D+ S+ K L EL+ + + + D HL + Sbjct: 55 AIERLNAAIDEETERLEIRVSVDLEESSRRKNHGLLELTRAMRLAQGAAVDPRVVPHLAR 114 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +R L N + L+ +LDA R V+ + + +QE+++DGTY Sbjct: 115 LRA---SLVRNQAALQIHLDAVRQVSAIIARSIQEVESDGTY 153 >gi|23009327|ref|ZP_00050418.1| hypothetical protein Magn03004242 [Magnetospirillum magnetotacticum MS-1] Length = 109 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQI--RTL 70 LKR+ A I+ E + L N D+ N K + L EL+ L S E + D I L Sbjct: 6 LKRLEATIEAETEALAANGALDLDAVNRAKSQSLLELTRLARSVEAGALDADTGIVLARL 65 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +KL N + +L A + D+ + LQ ++DGTY Sbjct: 66 RDKLIRNQEAVALHLRAVEEIGDVLQASLQAAESDGTY 103 >gi|188579936|ref|YP_001923381.1| hypothetical protein Mpop_0668 [Methylobacterium populi BJ001] gi|179343434|gb|ACB78846.1| conserved hypothetical protein [Methylobacterium populi BJ001] Length = 114 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQI--RTL 70 LKR+ A ++ E + L N+ D+ N K R L EL+ L + + D I L Sbjct: 6 LKRLEATVEAETEALAANAPLDLGAVNRAKSRSLLELTRLARGIDAANIDAETGIVLARL 65 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +KL N + +L A V + + LQ ++DGTY Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTY 103 >gi|158422282|ref|YP_001523574.1| hypothetical protein AZC_0658 [Azorhizobium caulinodans ORS 571] gi|158329171|dbj|BAF86656.1| hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 161 Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust. Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-EEISWDHLEQIRTLH 71 L R+ VID E L+ + D++ N K R L ELS + +++ E++ + Sbjct: 55 LDRLEIVIDQETAALEAHQPVDLAEMNRRKSRSLLELSRALRGLPDDVDSSLGERLTGIK 114 Query: 72 EKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 KL N +L +L AAR + + L+ ++DGTY Sbjct: 115 AKLTRNCEVLAMHLAAAREITTILNGALRAAESDGTY 151 >gi|218528738|ref|YP_002419554.1| hypothetical protein Mchl_0705 [Methylobacterium chloromethanicum CM4] gi|240137268|ref|YP_002961737.1| hypothetical protein MexAM1_META1p0519 [Methylobacterium extorquens AM1] gi|218521041|gb|ACK81626.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] gi|240007234|gb|ACS38460.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 110 Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQI--RTL 70 LKR+ A ++ E + L N+ D+ N K R L EL+ L + + D I L Sbjct: 6 LKRLEATVEAETEALSANAALDLDAVNRAKSRSLLELTRLARGLDVATLDAETGIVLARL 65 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +KL N + +L A V + + LQ ++DGTY Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTY 103 >gi|163850134|ref|YP_001638177.1| hypothetical protein Mext_0694 [Methylobacterium extorquens PA1] gi|254559279|ref|YP_003066374.1| hypothetical protein METDI0675 [Methylobacterium extorquens DM4] gi|163661739|gb|ABY29106.1| conserved hypothetical protein [Methylobacterium extorquens PA1] gi|254266557|emb|CAX22321.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 114 Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust. Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQI--RTL 70 LKR+ A ++ E + L N+ D+ N K R L EL+ L + + D I L Sbjct: 6 LKRLEATVEAETEALSANAALDLDAVNRAKSRSLLELTRLARGLDVATLDAETGIVLARL 65 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +KL N + +L A V + + LQ ++DGTY Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTY 103 >gi|153011497|ref|YP_001372711.1| hypothetical protein Oant_4182 [Ochrobactrum anthropi ATCC 49188] gi|151563385|gb|ABS16882.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 156 Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 5/102 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC----EEISWDHLEQI 67 ++R+ VID E + L D++ N K R L++ + I E + L+ + Sbjct: 44 AIQRLEDVIDTETRLLLEGGNPDLAEINSRKSRGLYDFNKAIKKAASAAEPATMKRLQPL 103 Query: 68 -RTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +L +KL N L+ +L A +ADL + L+ +ADGTY Sbjct: 104 LDSLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTY 145 >gi|254720783|ref|ZP_05182594.1| hypothetical protein Bru83_15042 [Brucella sp. 83/13] gi|265985842|ref|ZP_06098577.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306840126|ref|ZP_07472911.1| Hypothetical protein BROD_2999 [Brucella sp. NF 2653] gi|264664434|gb|EEZ34695.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306404771|gb|EFM61065.1| Hypothetical protein BROD_2999 [Brucella sp. NF 2653] Length = 158 Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL----SCEEISWDHL 64 + ++R+ VI+ E + L D++ N K R L++ + I + E + L Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGL 102 Query: 65 EQ-IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|306845408|ref|ZP_07477982.1| Hypothetical protein BIBO1_2096 [Brucella sp. BO1] gi|306274151|gb|EFM55967.1| Hypothetical protein BIBO1_2096 [Brucella sp. BO1] Length = 158 Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL----SCEEISWDHL 64 + ++R+ VI+ E + L D++ N K R L++ + I + E + L Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGL 102 Query: 65 EQ-IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|306841286|ref|ZP_07473997.1| Hypothetical protein BIBO2_1070 [Brucella sp. BO2] gi|306288688|gb|EFM60019.1| Hypothetical protein BIBO2_1070 [Brucella sp. BO2] Length = 164 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL----SCEEISWDHL 64 + ++R+ VI+ E + L D++ N K R L++ + I + E + L Sbjct: 49 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGL 108 Query: 65 EQ-IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 109 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154 >gi|170744555|ref|YP_001773210.1| hypothetical protein M446_6519 [Methylobacterium sp. 4-46] gi|168198829|gb|ACA20776.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 107 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQIRT-LH 71 L R+ A ID E + L D N K + L EL+ L +E + L T L Sbjct: 6 LTRLEATIDEETEALLTRRPIDQDEVNRRKSQSLLELTRLARHRDEPADPDLAACLTRLR 65 Query: 72 EKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +KLA N ++ L A V+++ L+ D+DGTY Sbjct: 66 DKLARNQEVVALNLRAVEEVSEVIAGALRAADSDGTY 102 >gi|256826733|ref|YP_003150692.1| ParB-like nuclease [Cryptobacterium curtum DSM 15641] gi|256582876|gb|ACU94010.1| ParB-like nuclease [Cryptobacterium curtum DSM 15641] Length = 410 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%) Query: 29 NNSQFDISISNDHKGRCLHELSVLILSCEEISWDHL--EQIRT---LHEKLALNSS---- 79 +N Q D+ I H GR L + I +C I DHL EQ R +H +L LNSS Sbjct: 52 HNPQGDMEIVEGH-GRVLALQRLGIDTCPVIYLDHLSDEQRRAYTHVHNQLTLNSSFDMS 110 Query: 80 LLESYLDAARVVADLF-----------KKQLQEIDADGTYHDGFCESLNPCKTT 122 +LES LD+ F +K+ + D HD F E KTT Sbjct: 111 VLESDLDSLDFDWGSFGFDDGESWFENRKKWDDQKGDSAEHDAFVEKFENKKTT 164 >gi|239834416|ref|ZP_04682744.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239822479|gb|EEQ94048.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 160 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC----EEISWDHLEQI 67 ++R+ VID E + L D++ N K R L++ + I E + L+ + Sbjct: 48 AIQRLEDVIDTETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAAGAAEPATMKPLQPL 107 Query: 68 -RTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 +L KL N L+ +L A +ADL + L+ +ADGTY Sbjct: 108 LDSLKHKLEKNCEALQLHLRAVGELADLIRGALETQEADGTY 149 >gi|163845447|ref|YP_001623102.1| hypothetical protein BSUIS_B1355 [Brucella suis ATCC 23445] gi|163676170|gb|ABY40280.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 158 Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E++ L D++ N K R L++ + I + + + Sbjct: 43 VMRAIERLEDVIETESRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGL 102 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|148558381|ref|YP_001257993.1| hypothetical protein BOV_A1033 [Brucella ovis ATCC 25840] gi|225628418|ref|ZP_03786452.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|148369666|gb|ABQ62538.1| conserved hypothetical protein [Brucella ovis ATCC 25840] gi|225616264|gb|EEH13312.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 175 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 60 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGL 119 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 120 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 165 >gi|23500843|ref|NP_700283.1| hypothetical protein BRA1128 [Brucella suis 1330] gi|161621171|ref|YP_001595057.1| hypothetical protein BCAN_B1157 [Brucella canis ATCC 23365] gi|254699253|ref|ZP_05161081.1| hypothetical protein Bsuib55_00087 [Brucella suis bv. 5 str. 513] gi|254702372|ref|ZP_05164200.1| hypothetical protein Bsuib36_00070 [Brucella suis bv. 3 str. 686] gi|254706507|ref|ZP_05168335.1| hypothetical protein BpinM_05857 [Brucella pinnipedialis M163/99/10] gi|254711208|ref|ZP_05173019.1| hypothetical protein BpinB_13295 [Brucella pinnipedialis B2/94] gi|256015887|ref|YP_003105896.1| hypothetical protein BMI_II1134 [Brucella microti CCM 4915] gi|256030163|ref|ZP_05443777.1| hypothetical protein BpinM2_05865 [Brucella pinnipedialis M292/94/1] gi|256059815|ref|ZP_05450010.1| hypothetical protein Bneo5_05660 [Brucella neotomae 5K33] gi|256158342|ref|ZP_05456246.1| hypothetical protein BcetM4_05797 [Brucella ceti M490/95/1] gi|256252724|ref|ZP_05458260.1| hypothetical protein BcetB_00085 [Brucella ceti B1/94] gi|260166785|ref|ZP_05753596.1| hypothetical protein BruF5_00070 [Brucella sp. F5/99] gi|260568725|ref|ZP_05839194.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261219802|ref|ZP_05934083.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313962|ref|ZP_05953159.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261318799|ref|ZP_05957996.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261323795|ref|ZP_05962992.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261749691|ref|ZP_05993400.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261752935|ref|ZP_05996644.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261756162|ref|ZP_05999871.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265987194|ref|ZP_06099751.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996857|ref|ZP_06109414.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|23464506|gb|AAN34288.1| conserved hypothetical protein [Brucella suis 1330] gi|161337982|gb|ABX64286.1| Hypothetical protein BCAN_B1157 [Brucella canis ATCC 23365] gi|255998547|gb|ACU50234.1| hypothetical protein BMI_II1134 [Brucella microti CCM 4915] gi|260155390|gb|EEW90471.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260918386|gb|EEX85039.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261298022|gb|EEY01519.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261299775|gb|EEY03272.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261302988|gb|EEY06485.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261736146|gb|EEY24142.1| conserved hypothetical protein [Brucella sp. F5/99] gi|261739444|gb|EEY27370.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261742688|gb|EEY30614.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262551154|gb|EEZ07315.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264659391|gb|EEZ29652.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 158 Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGL 102 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|225686875|ref|YP_002734847.1| hypothetical protein BMEA_B1122 [Brucella melitensis ATCC 23457] gi|256112187|ref|ZP_05453108.1| hypothetical protein Bmelb3E_05797 [Brucella melitensis bv. 3 str. Ether] gi|256261990|ref|ZP_05464522.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|265993614|ref|ZP_06106171.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|225642980|gb|ACO02893.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|262764484|gb|EEZ10516.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263091474|gb|EEZ16010.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] Length = 158 Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 102 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|256042854|ref|ZP_05445800.1| hypothetical protein Bmelb1R_00120 [Brucella melitensis bv. 1 str. Rev.1] gi|260564092|ref|ZP_05834577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265989290|ref|ZP_06101847.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|260151735|gb|EEW86828.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|262999959|gb|EEZ12649.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] Length = 158 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 102 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|326411291|gb|ADZ68355.1| conserved hypothetical protein [Brucella melitensis M28] gi|326554580|gb|ADZ89219.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 164 Score = 35.0 bits (79), Expect = 3.9, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 49 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 108 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 109 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154 >gi|118589955|ref|ZP_01547359.1| hypothetical protein SIAM614_14860 [Stappia aggregata IAM 12614] gi|118437452|gb|EAV44089.1| hypothetical protein SIAM614_14860 [Stappia aggregata IAM 12614] Length = 142 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 2/104 (1%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDH--LEQIRTL 70 ++R I + +E + L+ N D+ I K + L +L+ + H E + Sbjct: 36 VRRAIGAVLDETRALRANPTADLKIFEYGKSQALLDLARARSLVPPAFYSHELREDLADF 95 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCE 114 + L N LL+ +++A V + + + + ++DGTY F E Sbjct: 96 KDVLDENIGLLQLHMNAVSEVVGMMSRTMIDYESDGTYEAPFPE 139 >gi|237817492|ref|ZP_04596483.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|237787327|gb|EEP61544.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] Length = 175 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 60 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 119 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 120 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 165 >gi|297250161|ref|ZP_06933862.1| hypothetical protein BAYG_02949 [Brucella abortus bv. 5 str. B3196] gi|297174030|gb|EFH33394.1| hypothetical protein BAYG_02949 [Brucella abortus bv. 5 str. B3196] Length = 164 Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 49 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 108 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 109 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154 >gi|62317947|ref|YP_223800.1| hypothetical protein BruAb2_1065 [Brucella abortus bv. 1 str. 9-941] gi|83269924|ref|YP_419215.1| hypothetical protein BAB2_1085 [Brucella melitensis biovar Abortus 2308] gi|189023198|ref|YP_001932939.1| hypothetical protein BAbS19_II10100 [Brucella abortus S19] gi|254691623|ref|ZP_05154877.1| hypothetical protein Babob68_16092 [Brucella abortus bv. 6 str. 870] gi|254695081|ref|ZP_05156909.1| hypothetical protein Babob3T_10593 [Brucella abortus bv. 3 str. Tulya] gi|254698178|ref|ZP_05160006.1| hypothetical protein Babob28_10825 [Brucella abortus bv. 2 str. 86/8/59] gi|254731623|ref|ZP_05190201.1| hypothetical protein Babob42_10635 [Brucella abortus bv. 4 str. 292] gi|256256810|ref|ZP_05462346.1| hypothetical protein Babob9C_05520 [Brucella abortus bv. 9 str. C68] gi|260544131|ref|ZP_05819952.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260757253|ref|ZP_05869601.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260759382|ref|ZP_05871730.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260762625|ref|ZP_05874957.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883057|ref|ZP_05894671.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261215433|ref|ZP_05929714.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|62198140|gb|AAX76439.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82940198|emb|CAJ13251.1| conserved hypothetical protein [Brucella melitensis biovar Abortus 2308] gi|189021772|gb|ACD74493.1| hypothetical protein BAbS19_II10100 [Brucella abortus S19] gi|260097402|gb|EEW81276.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260669700|gb|EEX56640.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673046|gb|EEX59867.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260677361|gb|EEX64182.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872585|gb|EEX79654.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260917040|gb|EEX83901.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 158 Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66 + ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 43 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 102 Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|17988515|ref|NP_541148.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|17984308|gb|AAL53412.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M] Length = 115 Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust. Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ----- 66 ++R+ VI+ E + L D++ N K R L++ + I + + + Sbjct: 3 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 62 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 63 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 105 >gi|256422979|ref|YP_003123632.1| glycosyl transferase group 1 [Chitinophaga pinensis DSM 2588] gi|256037887|gb|ACU61431.1| glycosyl transferase group 1 [Chitinophaga pinensis DSM 2588] Length = 390 Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 5/55 (9%) Query: 59 ISWDHLEQIRTLHEKLALNSSLLESYLDAARVVA-----DLFKKQLQEIDADGTY 108 IS ++++++R E+L N L AA++VA + FK+Q++++ ADGTY Sbjct: 308 ISGNYIDKVRKHVEQLLSNKPLYADMSCAAQLVAFQFKPEFFKQQVEDLFADGTY 362 >gi|298208201|ref|YP_003716380.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Croceibacter atlanticus HTCC2559] gi|83848122|gb|EAP85992.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Croceibacter atlanticus HTCC2559] Length = 467 Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI 53 S DY+I T++ ++ +N ++KN S+F IS+ LHEL +L+ Sbjct: 156 SDDYQITTMVDFGTKILGTQNASIKNLSEFKDEISDARTFSFLHELEMLL 205 Searching..................................................done Results from round 2 >gi|254780508|ref|YP_003064921.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter asiaticus str. psy62] gi|254040185|gb|ACT56981.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter asiaticus str. psy62] Length = 123 Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats. Identities = 123/123 (100%), Positives = 123/123 (100%) Query: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS Sbjct: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK Sbjct: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120 Query: 121 TTT 123 TTT Sbjct: 121 TTT 123 >gi|315122295|ref|YP_004062784.1| hypothetical protein CKC_02735 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495697|gb|ADR52296.1| hypothetical protein CKC_02735 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 123 Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats. Identities = 91/121 (75%), Positives = 101/121 (83%) Query: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60 MST +DYRIQTVLKRVI VIDNENKNLK N QFDIS SND+KGRCLHELSV ++SC+ IS Sbjct: 1 MSTLNDYRIQTVLKRVIEVIDNENKNLKTNKQFDISASNDNKGRCLHELSVFLISCKYIS 60 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120 DH EQIR L EKLALNSSLLESYL+AARVVADLFKK+LQ+ID DGTY +G + K Sbjct: 61 CDHSEQIRILQEKLALNSSLLESYLNAARVVADLFKKRLQDIDTDGTYSNGCSGFFDTSK 120 Query: 121 T 121 T Sbjct: 121 T 121 >gi|325291973|ref|YP_004277837.1| hypothetical protein AGROH133_04008 [Agrobacterium sp. H13-3] gi|325059826|gb|ADY63517.1| hypothetical protein AGROH133_04008 [Agrobacterium sp. H13-3] Length = 122 Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats. Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 2/108 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEISW 61 S+D+RI++VL R+ +IDNEN N+ + QFD +SN HK RCL+EL++L EEI+ Sbjct: 5 SNDHRIKSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLFRDTPHEEIAA 64 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 HL+Q++ + KLA N+S +E++L+A R VADL K +QE D DGTY Sbjct: 65 GHLDQVQGIKSKLATNASRVEAHLNAVRAVADLLKTAIQEADTDGTYS 112 >gi|222147600|ref|YP_002548557.1| hypothetical protein Avi_0777 [Agrobacterium vitis S4] gi|221734588|gb|ACM35551.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 121 Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats. Identities = 51/109 (46%), Positives = 77/109 (70%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEIS 60 S+DYRI+TVL R+ ++DNEN + N+ QFD +SN HK RCL+EL++L +EI+ Sbjct: 4 VSNDYRIKTVLGRLEMIVDNENHRIGNDPQFDFKVSNAHKSRCLYELTMLFRDTDPKEIA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 +++EQ+ L +KLALN+ +E++LDA R VAD+ + +Q+ D DGTY Sbjct: 64 INYVEQMHGLKKKLALNARRVEAHLDAVRAVADILRSAVQDADNDGTYS 112 >gi|159184376|ref|NP_353611.2| hypothetical protein Atu0585 [Agrobacterium tumefaciens str. C58] gi|159139689|gb|AAK86396.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 122 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 51/108 (47%), Positives = 77/108 (71%), Gaps = 2/108 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEISW 61 S+D+RIQ+VL R+ +IDNEN N+ + QFD +SN HK RCL+EL++L+ E+I+ Sbjct: 5 SNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHEDIAA 64 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 ++EQ++ + KLA N++ +E++L+A R VADL K +QE D DGTY Sbjct: 65 GYMEQVKGIKSKLATNATRVEAHLNAVRAVADLLKNAIQEADTDGTYS 112 >gi|222084896|ref|YP_002543425.1| hypothetical protein Arad_0925 [Agrobacterium radiobacter K84] gi|221722344|gb|ACM25500.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 122 Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats. Identities = 49/109 (44%), Positives = 75/109 (68%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEIS 60 S+DYRI++VL R+ +IDNEN + ++ +FD+ +SN HK RCL+EL++L E++ Sbjct: 4 ISNDYRIKSVLGRLEMIIDNENNRIGSDPEFDLKVSNAHKSRCLYELTMLFRDTNPAELA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 H+EQ+ L +KL LN+ +E++L+A R VAD+ K +Q DADGTY Sbjct: 64 VTHIEQLHGLKKKLTLNARRVEAHLEAVRAVADILKNAVQNADADGTYS 112 >gi|190890393|ref|YP_001976935.1| hypothetical protein RHECIAT_CH0000768 [Rhizobium etli CIAT 652] gi|218509488|ref|ZP_03507366.1| hypothetical protein RetlB5_19249 [Rhizobium etli Brasil 5] gi|218516755|ref|ZP_03513595.1| hypothetical protein Retl8_25658 [Rhizobium etli 8C-3] gi|190695672|gb|ACE89757.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 121 Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 76/109 (69%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEIS 60 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L E++ Sbjct: 4 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112 >gi|86356341|ref|YP_468233.1| hypothetical protein RHE_CH00690 [Rhizobium etli CFN 42] gi|86280443|gb|ABC89506.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 121 Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 4 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 64 ASHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112 >gi|218463242|ref|ZP_03503333.1| hypothetical protein RetlK5_29129 [Rhizobium etli Kim 5] Length = 121 Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 4 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112 >gi|209547957|ref|YP_002279874.1| hypothetical protein Rleg2_0349 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533713|gb|ACI53648.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 121 Score = 150 bits (378), Expect = 8e-35, Method: Composition-based stats. Identities = 51/109 (46%), Positives = 77/109 (70%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S++YRI++VL R+ +IDNEN + ++ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 4 VSNEYRIKSVLGRLEMIIDNENTRIGSDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112 >gi|327193071|gb|EGE59983.1| hypothetical protein RHECNPAF_1760072 [Rhizobium etli CNPAF512] Length = 143 Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 26 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 85 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 86 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 134 >gi|116250511|ref|YP_766349.1| hypothetical protein RL0739 [Rhizobium leguminosarum bv. viciae 3841] gi|115255159|emb|CAK06233.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 144 Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++ Sbjct: 27 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 86 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 87 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 135 >gi|241203135|ref|YP_002974231.1| hypothetical protein Rleg_0381 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857025|gb|ACS54692.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 121 Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats. Identities = 52/109 (47%), Positives = 76/109 (69%), Gaps = 2/109 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60 S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS L + E++ Sbjct: 4 VSNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSTLFRDTDPAELA 63 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112 >gi|15964443|ref|NP_384796.1| hypothetical protein SMc03072 [Sinorhizobium meliloti 1021] gi|307311585|ref|ZP_07591226.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C] gi|307318940|ref|ZP_07598371.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|15073620|emb|CAC45262.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021] gi|306895354|gb|EFN26109.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|306899602|gb|EFN30231.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C] Length = 122 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEIS 60 S+D RIQ VL R+ +IDNEN + + +FD+ SN HK RCL+EL++L EIS Sbjct: 5 ASNDLRIQNVLGRLEMIIDNENSRIGADPEFDLKTSNAHKSRCLYELTMLHRDAGPGEIS 64 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 Q R L KL +N+ + ++L+A R V DL K Q+ DADG Y + Sbjct: 65 PAFAAQTRHLRSKLQVNAQKVAAHLEAVRSVVDLLKTAAQDADADGIYTEA 115 >gi|227820886|ref|YP_002824856.1| hypothetical protein NGR_c03050 [Sinorhizobium fredii NGR234] gi|227339885|gb|ACP24103.1| hypothetical protein NGR_c03050 [Sinorhizobium fredii NGR234] Length = 122 Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats. Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 2/111 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEIS 60 S D RIQ VL R+ +IDNEN + + +FDI SN HK RCL+EL++L EIS Sbjct: 5 ASHDLRIQNVLGRLEMIIDNENSRIGVDPKFDIKTSNAHKSRCLYELTMLHRDTAAGEIS 64 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 Q R L +KL LN+ +E++L+A R V DL K Q+ DADG Y + Sbjct: 65 PSFASQTRHLRQKLKLNAQKVEAHLEAVRSVVDLLKTAAQDADADGIYTEA 115 >gi|150395514|ref|YP_001325981.1| hypothetical protein Smed_0287 [Sinorhizobium medicae WSM419] gi|150027029|gb|ABR59146.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 122 Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats. Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%) Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEIS 60 S+D RIQ VL R+ +IDNEN + + +FD+ SN HK RCL+EL++L EIS Sbjct: 5 ASNDLRIQNVLGRLEMIIDNENSRIGADPEFDLKTSNAHKSRCLYELTMLHRDAGPGEIS 64 Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 Q R L KL +N+ + ++L+A R V DL K Q+ DADG Y + Sbjct: 65 PAFAAQTRHLRNKLEVNAQKVAAHLEAVRSVVDLLKTAAQDADADGIYTEA 115 >gi|319781644|ref|YP_004141120.1| hypothetical protein Mesci_1917 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167532|gb|ADV11070.1| hypothetical protein Mesci_1917 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 141 Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats. Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 2/105 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66 + ++ R+ V++ E ++N + +D+ SN K R L+EL+ + E + H E Sbjct: 30 LAAIIGRIEEVVEEETAGIRNATNYDLKASNARKSRYLYELTRAMKGGSEAEFLEQHREG 89 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 + L +KLA N + + ++L A VA L + +Q + DGTY G Sbjct: 90 LTRLRQKLAKNEAAILAHLSAVNEVASLLRHAIQRAETDGTYSAG 134 >gi|163758043|ref|ZP_02165131.1| hypothetical protein HPDFL43_00420 [Hoeflea phototrophica DFL-43] gi|162284332|gb|EDQ34615.1| hypothetical protein HPDFL43_00420 [Hoeflea phototrophica DFL-43] Length = 126 Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats. Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 2/109 (1%) Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEISW 61 + D RIQ VL R+ VID ENK L +D+ SN K RCL+++++L + +++ Sbjct: 9 TQDQRIQLVLSRLETVIDAENKALGVERDYDLKRSNALKSRCLYDMTMLFKNIRPGQLAP 68 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110 H ++ ++ KL +N + +++++DA R +AD+ K+ + E +ADGTY Sbjct: 69 GHKRRLDSVRAKLDVNQAKVKAHMDAVRDIADMIKESVAESEADGTYSA 117 >gi|260466577|ref|ZP_05812765.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|259029583|gb|EEW30871.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] Length = 140 Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats. Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 2/104 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66 + ++ R+ V++ E +++++ +D+ SN K R L+EL+ + E+ + H E Sbjct: 30 LAAIIGRIEEVVEEETAGIRSDTSYDLKASNARKSRYLYELTRAMKGGSEVEFLEQHREG 89 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110 + L +KLA N + + ++L A VA L + +Q + DGTY Sbjct: 90 LTRLRQKLARNEAAILAHLSAVNEVAGLLRTAIQRAETDGTYSA 133 >gi|13472617|ref|NP_104184.1| hypothetical protein mlr2965 [Mesorhizobium loti MAFF303099] gi|14023363|dbj|BAB49970.1| mlr2965 [Mesorhizobium loti MAFF303099] Length = 141 Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats. Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66 + ++ R+ V++ E +++++ +D+ SN K R L+EL+ + E + H E Sbjct: 30 LAAIIGRIEEVVEEETAGIRSDTSYDLKASNARKSRYLYELTRAMKGGSEAEFLEQHREG 89 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 + L +KLA N + + ++L A VA L + +Q + DGTY G Sbjct: 90 LTRLRQKLAKNEAAILAHLSAVNEVAGLLRSAIQRAETDGTYSAG 134 >gi|110632629|ref|YP_672837.1| hypothetical protein Meso_0268 [Mesorhizobium sp. BNC1] gi|110283613|gb|ABG61672.1| conserved hypothetical protein [Chelativorans sp. BNC1] Length = 132 Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats. Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 5/111 (4%) Query: 4 SSDYR---IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEE-- 58 S D R + +++ R+ I+ E L+ N +FDI SN K R LHELS+++ + E Sbjct: 15 SPDQRSAGLLSLITRIEESIEAETVALRANPRFDIKASNARKSRYLHELSMVVRTIREGD 74 Query: 59 ISWDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + DH E + L KL N + L ++L A VA L + +++ ADGTY Sbjct: 75 LGADHREALVRLRTKLTQNEAALRAHLSAVGEVATLLQDAIRQAQADGTYS 125 >gi|328545477|ref|YP_004305586.1| hypothetical protein SL003B_3861 [polymorphum gilvum SL003B-26A1] gi|326415217|gb|ADZ72280.1| hypothetical protein SL003B_3861 [Polymorphum gilvum SL003B-26A1] Length = 122 Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHEL--SVLILSCEEISWDHLEQ 66 + + R AV++ E + L+ + D+ K + L +L + L E + EQ Sbjct: 12 LHAAIARAQAVVEAETEALRRRAGIDLKSFEYRKSQALLDLDRARRSLPSEGLDRRTSEQ 71 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESL 116 + L +L N +LL +++ A R +AD+ K + E D+DGTY L Sbjct: 72 LGMLRMRLDENMALLSTHMSAVREIADVIAKAMLEADSDGTYSRPGSGCL 121 >gi|300024565|ref|YP_003757176.1| hypothetical protein Hden_3060 [Hyphomicrobium denitrificans ATCC 51888] gi|299526386|gb|ADJ24855.1| hypothetical protein Hden_3060 [Hyphomicrobium denitrificans ATCC 51888] Length = 163 Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats. Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEISWDHLEQIR 68 V+ R+ +D E L + +FD SND K + L +L+ + +++ D ++ Sbjct: 53 AVIARIEGYLDEETHALDKSLKFDFKTSNDRKSQGLLDLNQALRRLQKSDVNADLQLRLA 112 Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 T EKL++N + +LDA + +A + +Q ++DGTY Sbjct: 113 TFREKLSVNLRKIRLHLDAVKEIAAMLSDAIQNAESDGTYT 153 >gi|115523204|ref|YP_780115.1| hypothetical protein RPE_1183 [Rhodopseudomonas palustris BisA53] gi|115517151|gb|ABJ05135.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 159 Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats. Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 2/101 (1%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHL--EQIR 68 + ++R+ ID E + L+ + D + K R L EL+ + E D ++ Sbjct: 53 SAIERLKTTIDEETEKLEIRAATDFDGFSRRKNRGLLELTRAVRLAENGGVDPRLVPELT 112 Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 L L N + L+ +LDA R V+ + K +QE+++DGTY Sbjct: 113 RLRASLVRNQAALQIHLDAVREVSAIIAKSIQEVESDGTYS 153 >gi|27381959|ref|NP_773488.1| hypothetical protein bll6848 [Bradyrhizobium japonicum USDA 110] gi|27355129|dbj|BAC52113.1| bll6848 [Bradyrhizobium japonicum USDA 110] Length = 170 Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 2/103 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS--WDHLEQ 66 + ++R+ ++++ E L + D + K R + E L+ + + + E+ Sbjct: 60 LLAAIRRLESIVEEETVALATGKKIDFDDFSARKSRSMLEFVRLMRARMHLGSEVEITEE 119 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 ++ L EKL N S+LE + DA R VA + K +++ D+DGTY Sbjct: 120 VQRLREKLERNRSILEMHYDAVREVATIIVKAIKDADSDGTYT 162 >gi|90422635|ref|YP_531005.1| hypothetical protein RPC_1122 [Rhodopseudomonas palustris BisB18] gi|90104649|gb|ABD86686.1| hypothetical protein RPC_1122 [Rhodopseudomonas palustris BisB18] Length = 162 Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHL--EQIR 68 ++R+ A ID E + L+ D+ S+ K L EL+ + + + D + Sbjct: 54 NAIERLNAAIDEETERLEIRVSVDLEESSRRKNHGLLELTRAMRLAQGAAVDPRVVPHLA 113 Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 L L N + L+ +LDA R V+ + + +QE+++DGTY Sbjct: 114 RLRASLVRNQAALQIHLDAVRQVSAIIARSIQEVESDGTYSAA 156 >gi|158422282|ref|YP_001523574.1| hypothetical protein AZC_0658 [Azorhizobium caulinodans ORS 571] gi|158329171|dbj|BAF86656.1| hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 161 Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats. Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS-CEEISWDHLEQI 67 + + L R+ VID E L+ + D++ N K R L ELS + +++ E++ Sbjct: 51 LVSSLDRLEIVIDQETAALEAHQPVDLAEMNRRKSRSLLELSRALRGLPDDVDSSLGERL 110 Query: 68 RTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCE 114 + KL N +L +L AAR + + L+ ++DGTY Sbjct: 111 TGIKAKLTRNCEVLAMHLAAAREITTILNGALRAAESDGTYSTALLG 157 >gi|254503173|ref|ZP_05115324.1| hypothetical protein SADFL11_3212 [Labrenzia alexandrii DFL-11] gi|222439244|gb|EEE45923.1| hypothetical protein SADFL11_3212 [Labrenzia alexandrii DFL-11] Length = 124 Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 2/105 (1%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEISWDHLEQIRT 69 + R I V++ E + L+ N D+ K + L +L+ ++ + D +++ Sbjct: 17 AIDRAIEVVEAETRALRANPTTDLKPFEYRKSQALLDLTRARSLVPPSAYTEDVKDRLVD 76 Query: 70 LHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCE 114 + L N LL +++A V + + + + ++DGTY F E Sbjct: 77 FKDVLQENVDLLTLHMNAVSEVVKMMSRTMLDQESDGTYAAPFPE 121 >gi|23009327|ref|ZP_00050418.1| hypothetical protein Magn03004242 [Magnetospirillum magnetotacticum MS-1] Length = 109 Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats. Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEISWDHLEQ 66 + LKR+ A I+ E + L N D+ N K + L EL+ L S + D Sbjct: 2 LLASLKRLEATIEAETEALAANGALDLDAVNRAKSQSLLELTRLARSVEAGALDADTGIV 61 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N + +L A + D+ + LQ ++DGTY Sbjct: 62 LARLRDKLIRNQEAVALHLRAVEEIGDVLQASLQAAESDGTYS 104 >gi|220926494|ref|YP_002501796.1| hypothetical protein Mnod_6733 [Methylobacterium nodulans ORS 2060] gi|219951101|gb|ACL61493.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 108 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 2/103 (1%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ--IR 68 L R+ A ID E + + D N K + L EL+ L E+ D + Sbjct: 4 ASLTRLEATIDAETEAQLTRAPIDQDEFNRRKSQSLLELTRLSRHREDAGPDPDLAACLA 63 Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 L +KLA N ++ +L A V+++ L+ ++DGTY Sbjct: 64 RLRDKLARNQEVVALHLRAVEEVSEVIATALRAAESDGTYTAA 106 >gi|188579936|ref|YP_001923381.1| hypothetical protein Mpop_0668 [Methylobacterium populi BJ001] gi|179343434|gb|ACB78846.1| conserved hypothetical protein [Methylobacterium populi BJ001] Length = 114 Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEISWDHLEQIRTL 70 LKR+ A ++ E + L N+ D+ N K R L EL+ L I + + L Sbjct: 6 LKRLEATVEAETEALAANAPLDLGAVNRAKSRSLLELTRLARGIDAANIDAETGIVLARL 65 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110 +KL N + +L A V + + LQ ++DGTY Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTYSA 105 >gi|256042854|ref|ZP_05445800.1| hypothetical protein Bmelb1R_00120 [Brucella melitensis bv. 1 str. Rev.1] gi|260564092|ref|ZP_05834577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265989290|ref|ZP_06101847.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|260151735|gb|EEW86828.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|262999959|gb|EEZ12649.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] Length = 158 Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 105 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|225686875|ref|YP_002734847.1| hypothetical protein BMEA_B1122 [Brucella melitensis ATCC 23457] gi|256112187|ref|ZP_05453108.1| hypothetical protein Bmelb3E_05797 [Brucella melitensis bv. 3 str. Ether] gi|256261990|ref|ZP_05464522.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|265993614|ref|ZP_06106171.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|225642980|gb|ACO02893.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|262764484|gb|EEZ10516.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|263091474|gb|EEZ16010.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] Length = 158 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 105 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|23500843|ref|NP_700283.1| hypothetical protein BRA1128 [Brucella suis 1330] gi|161621171|ref|YP_001595057.1| hypothetical protein BCAN_B1157 [Brucella canis ATCC 23365] gi|254699253|ref|ZP_05161081.1| hypothetical protein Bsuib55_00087 [Brucella suis bv. 5 str. 513] gi|254702372|ref|ZP_05164200.1| hypothetical protein Bsuib36_00070 [Brucella suis bv. 3 str. 686] gi|254706507|ref|ZP_05168335.1| hypothetical protein BpinM_05857 [Brucella pinnipedialis M163/99/10] gi|254711208|ref|ZP_05173019.1| hypothetical protein BpinB_13295 [Brucella pinnipedialis B2/94] gi|256015887|ref|YP_003105896.1| hypothetical protein BMI_II1134 [Brucella microti CCM 4915] gi|256030163|ref|ZP_05443777.1| hypothetical protein BpinM2_05865 [Brucella pinnipedialis M292/94/1] gi|256059815|ref|ZP_05450010.1| hypothetical protein Bneo5_05660 [Brucella neotomae 5K33] gi|256158342|ref|ZP_05456246.1| hypothetical protein BcetM4_05797 [Brucella ceti M490/95/1] gi|256252724|ref|ZP_05458260.1| hypothetical protein BcetB_00085 [Brucella ceti B1/94] gi|260166785|ref|ZP_05753596.1| hypothetical protein BruF5_00070 [Brucella sp. F5/99] gi|260568725|ref|ZP_05839194.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|261219802|ref|ZP_05934083.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313962|ref|ZP_05953159.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261318799|ref|ZP_05957996.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261323795|ref|ZP_05962992.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261749691|ref|ZP_05993400.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261752935|ref|ZP_05996644.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|261756162|ref|ZP_05999871.1| conserved hypothetical protein [Brucella sp. F5/99] gi|265987194|ref|ZP_06099751.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265996857|ref|ZP_06109414.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|23464506|gb|AAN34288.1| conserved hypothetical protein [Brucella suis 1330] gi|161337982|gb|ABX64286.1| Hypothetical protein BCAN_B1157 [Brucella canis ATCC 23365] gi|255998547|gb|ACU50234.1| hypothetical protein BMI_II1134 [Brucella microti CCM 4915] gi|260155390|gb|EEW90471.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260918386|gb|EEX85039.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261298022|gb|EEY01519.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261299775|gb|EEY03272.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261302988|gb|EEY06485.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261736146|gb|EEY24142.1| conserved hypothetical protein [Brucella sp. F5/99] gi|261739444|gb|EEY27370.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261742688|gb|EEY30614.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262551154|gb|EEZ07315.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|264659391|gb|EEZ29652.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] Length = 158 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGLQPF 105 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|148558381|ref|YP_001257993.1| hypothetical protein BOV_A1033 [Brucella ovis ATCC 25840] gi|225628418|ref|ZP_03786452.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|148369666|gb|ABQ62538.1| conserved hypothetical protein [Brucella ovis ATCC 25840] gi|225616264|gb|EEH13312.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] Length = 175 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 63 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGLQPF 122 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 123 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 165 >gi|326411291|gb|ADZ68355.1| conserved hypothetical protein [Brucella melitensis M28] gi|326554580|gb|ADZ89219.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 164 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 52 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 111 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 112 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154 >gi|62317947|ref|YP_223800.1| hypothetical protein BruAb2_1065 [Brucella abortus bv. 1 str. 9-941] gi|83269924|ref|YP_419215.1| hypothetical protein BAB2_1085 [Brucella melitensis biovar Abortus 2308] gi|189023198|ref|YP_001932939.1| hypothetical protein BAbS19_II10100 [Brucella abortus S19] gi|254691623|ref|ZP_05154877.1| hypothetical protein Babob68_16092 [Brucella abortus bv. 6 str. 870] gi|254695081|ref|ZP_05156909.1| hypothetical protein Babob3T_10593 [Brucella abortus bv. 3 str. Tulya] gi|254698178|ref|ZP_05160006.1| hypothetical protein Babob28_10825 [Brucella abortus bv. 2 str. 86/8/59] gi|254731623|ref|ZP_05190201.1| hypothetical protein Babob42_10635 [Brucella abortus bv. 4 str. 292] gi|256256810|ref|ZP_05462346.1| hypothetical protein Babob9C_05520 [Brucella abortus bv. 9 str. C68] gi|260544131|ref|ZP_05819952.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260757253|ref|ZP_05869601.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260759382|ref|ZP_05871730.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260762625|ref|ZP_05874957.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883057|ref|ZP_05894671.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261215433|ref|ZP_05929714.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|62198140|gb|AAX76439.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82940198|emb|CAJ13251.1| conserved hypothetical protein [Brucella melitensis biovar Abortus 2308] gi|189021772|gb|ACD74493.1| hypothetical protein BAbS19_II10100 [Brucella abortus S19] gi|260097402|gb|EEW81276.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260669700|gb|EEX56640.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673046|gb|EEX59867.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260677361|gb|EEX64182.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872585|gb|EEX79654.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260917040|gb|EEX83901.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] Length = 158 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DH 63 + ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 43 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 102 Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|297250161|ref|ZP_06933862.1| hypothetical protein BAYG_02949 [Brucella abortus bv. 5 str. B3196] gi|297174030|gb|EFH33394.1| hypothetical protein BAYG_02949 [Brucella abortus bv. 5 str. B3196] Length = 164 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DH 63 + ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 49 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 108 Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 109 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154 >gi|237817492|ref|ZP_04596483.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|237787327|gb|EEP61544.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] Length = 175 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DH 63 + ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 60 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 119 Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 120 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 165 >gi|170744555|ref|YP_001773210.1| hypothetical protein M446_6519 [Methylobacterium sp. 4-46] gi|168198829|gb|ACA20776.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 107 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 1/99 (1%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEE-ISWDHLEQIRT 69 L R+ A ID E + L D N K + L EL+ L +E D + Sbjct: 4 ASLTRLEATIDEETEALLTRRPIDQDEVNRRKSQSLLELTRLARHRDEPADPDLAACLTR 63 Query: 70 LHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 L +KLA N ++ L A V+++ L+ D+DGTY Sbjct: 64 LRDKLARNQEVVALNLRAVEEVSEVIAGALRAADSDGTY 102 >gi|306845408|ref|ZP_07477982.1| Hypothetical protein BIBO1_2096 [Brucella sp. BO1] gi|306274151|gb|EFM55967.1| Hypothetical protein BIBO1_2096 [Brucella sp. BO1] Length = 158 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGLQPF 105 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|254720783|ref|ZP_05182594.1| hypothetical protein Bru83_15042 [Brucella sp. 83/13] gi|265985842|ref|ZP_06098577.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306840126|ref|ZP_07472911.1| Hypothetical protein BROD_2999 [Brucella sp. NF 2653] gi|264664434|gb|EEZ34695.1| conserved hypothetical protein [Brucella sp. 83/13] gi|306404771|gb|EFM61065.1| Hypothetical protein BROD_2999 [Brucella sp. NF 2653] Length = 158 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGLQPF 105 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|17988515|ref|NP_541148.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M] gi|17984308|gb|AAL53412.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M] Length = 115 Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 3 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 62 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 63 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 105 >gi|163845447|ref|YP_001623102.1| hypothetical protein BSUIS_B1355 [Brucella suis ATCC 23445] gi|163676170|gb|ABY40280.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] Length = 158 Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66 ++R+ VI+ E++ L D++ N K R L++ + I + + Sbjct: 46 AIERLEDVIETESRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGLQPF 105 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148 >gi|306841286|ref|ZP_07473997.1| Hypothetical protein BIBO2_1070 [Brucella sp. BO2] gi|306288688|gb|EFM60019.1| Hypothetical protein BIBO2_1070 [Brucella sp. BO2] Length = 164 Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats. Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66 ++R+ VI+ E + L D++ N K R L++ + I + + Sbjct: 52 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGLQPF 111 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L +KL N L+ +L A +ADL + L+ +ADGTY+ Sbjct: 112 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154 >gi|163850134|ref|YP_001638177.1| hypothetical protein Mext_0694 [Methylobacterium extorquens PA1] gi|254559279|ref|YP_003066374.1| hypothetical protein METDI0675 [Methylobacterium extorquens DM4] gi|163661739|gb|ABY29106.1| conserved hypothetical protein [Methylobacterium extorquens PA1] gi|254266557|emb|CAX22321.1| conserved hypothetical protein [Methylobacterium extorquens DM4] Length = 114 Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats. Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 2/106 (1%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISWDHLEQIRTL 70 LKR+ A ++ E + L N+ D+ N K R L EL+ L + + + + L Sbjct: 6 LKRLEATVEAETEALSANAALDLDAVNRAKSRSLLELTRLARGLDVATLDAETGIVLARL 65 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESL 116 +KL N + +L A V + + LQ ++DGTY L Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTYSARLSAHL 111 >gi|218528738|ref|YP_002419554.1| hypothetical protein Mchl_0705 [Methylobacterium chloromethanicum CM4] gi|240137268|ref|YP_002961737.1| hypothetical protein MexAM1_META1p0519 [Methylobacterium extorquens AM1] gi|218521041|gb|ACK81626.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] gi|240007234|gb|ACS38460.1| conserved hypothetical protein [Methylobacterium extorquens AM1] Length = 110 Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISWDHLEQIRTL 70 LKR+ A ++ E + L N+ D+ N K R L EL+ L + + + + L Sbjct: 6 LKRLEATVEAETEALSANAALDLDAVNRAKSRSLLELTRLARGLDVATLDAETGIVLARL 65 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110 +KL N + +L A V + + LQ ++DGTY Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTYSA 105 >gi|153011497|ref|YP_001372711.1| hypothetical protein Oant_4182 [Ochrobactrum anthropi ATCC 49188] gi|151563385|gb|ABS16882.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 156 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66 ++R+ VID E + L D++ N K R L++ + I + Sbjct: 44 AIQRLEDVIDTETRLLLEGGNPDLAEINSRKSRGLYDFNKAIKKAASAAEPATMKRLQPL 103 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + +L +KL N L+ +L A +ADL + L+ +ADGTY Sbjct: 104 LDSLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYS 146 >gi|118589955|ref|ZP_01547359.1| hypothetical protein SIAM614_14860 [Stappia aggregata IAM 12614] gi|118437452|gb|EAV44089.1| hypothetical protein SIAM614_14860 [Stappia aggregata IAM 12614] Length = 142 Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEISWDHLEQIRT 69 ++R I + +E + L+ N D+ I K + L +L+ ++ S + E + Sbjct: 35 AVRRAIGAVLDETRALRANPTADLKIFEYGKSQALLDLARARSLVPPAFYSHELREDLAD 94 Query: 70 LHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCE 114 + L N LL+ +++A V + + + + ++DGTY F E Sbjct: 95 FKDVLDENIGLLQLHMNAVSEVVGMMSRTMIDYESDGTYEAPFPE 139 >gi|170748114|ref|YP_001754374.1| hypothetical protein Mrad2831_1696 [Methylobacterium radiotolerans JCM 2831] gi|170654636|gb|ACB23691.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM 2831] Length = 111 Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 2/105 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEISWDHLEQ 66 + + L R+ A ID E L + D N K + L E + L +S ++ Sbjct: 2 LLSSLNRLEATIDAETTALTVHDLRDQDEFNRRKSQSLVEFARLGRAVDAANLSAAEIDG 61 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111 + + KL N LL +L A + V+D+ ++ ++DGTY Sbjct: 62 LERVRAKLRRNHELLGIHLRAMQEVSDIVATMIRSAESDGTYSAA 106 >gi|323136990|ref|ZP_08072070.1| hypothetical protein Met49242DRAFT_1457 [Methylocystis sp. ATCC 49242] gi|322397751|gb|EFY00273.1| hypothetical protein Met49242DRAFT_1457 [Methylocystis sp. ATCC 49242] Length = 139 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS-CEEISWDHLEQIRTLH 71 ++R+ +ID E + L++ ++ D N K L E + + + S +++ L Sbjct: 35 VERLEDLIDAETQVLRSCARIDFEALNLRKTHALLEFTRVARNLPPRASSLAQQRLNRLV 94 Query: 72 EKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 EKL N+ L+ +L A + + L + ++ ++DGTY Sbjct: 95 EKLGSNTEALQLHLHAMQEITCLIVESIRSDESDGTYS 132 >gi|239834416|ref|ZP_04682744.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239822479|gb|EEQ94048.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 160 Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66 ++R+ VID E + L D++ N K R L++ + I + Sbjct: 48 AIQRLEDVIDTETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAAGAAEPATMKPLQPL 107 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + +L KL N L+ +L A +ADL + L+ +ADGTY Sbjct: 108 LDSLKHKLEKNCEALQLHLRAVGELADLIRGALETQEADGTYS 150 >gi|182680485|ref|YP_001834631.1| hypothetical protein Bind_3586 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636368|gb|ACB97142.1| hypothetical protein Bind_3586 [Beijerinckia indica subsp. indica ATCC 9039] Length = 147 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 2/104 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDH--LEQ 66 + + R+ ++ E K L+ N + N K + L EL +I E ++ E+ Sbjct: 34 LVNAIDRLETIVMQETKILRENCAISLQDFNHQKTQGLLELRRVIRGLEGTRFETEIQER 93 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110 L L N L+++L A + + + ++ ++DGTY Sbjct: 94 FAHLRAVLDYNLQALKNHLTAIEGITETIIETVKSYESDGTYSA 137 >gi|296445185|ref|ZP_06887145.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] gi|296257359|gb|EFH04426.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] Length = 143 Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 2/99 (2%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEISWDHLEQIRTL 70 + R+ +I+ E+ L+ D N K L E S + + L Sbjct: 38 VDRLARLIELESAALRERRAIDFEEFNSRKAHALLEFSRASRAFGATRSAPSVEAALTRL 97 Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 ++LA N+ LL+ L A R +A + ++ D+DGTY Sbjct: 98 RDRLAENAELLDDRLRAMREIAGIMIYTIEMADSDGTYS 136 >gi|319406961|emb|CBI80598.1| conserved hypothetical protein [Bartonella sp. 1-1C] Length = 149 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 5/107 (4%) Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWD 62 + +K + V+D E+ L+N+ D N K R L +L+ + + +I + Sbjct: 33 KFNAAIKGLAEVVDYESNMLENHGAPDYEEINLRKTRGLRDLNKSMNDVKRYMDQDIEIE 92 Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 + L EKL NS LL +L+A R ++ + + ++ + DGTY+ Sbjct: 93 VQTLLTDLQEKLNRNSELLRIHLEAVRDLSQIIQVAVRAEETDGTYN 139 >gi|217976251|ref|YP_002360398.1| hypothetical protein Msil_0053 [Methylocella silvestris BL2] gi|217501627|gb|ACK49036.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 119 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 5/104 (4%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ----- 66 ++R+ I E L N+ + N K L EL I +C+ + E+ Sbjct: 7 AIERLERTITLETGALDRNNLAALHEFNHMKSHGLLELKRAIDACQTVDRATFEEEAKAA 66 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110 + KL N L L A +A + + +++ ++DGTY Sbjct: 67 LAGFRAKLERNLDGLRMQLRAVSEIASIIARAIEDHESDGTYTA 110 >gi|319403944|emb|CBI77532.1| conserved hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 147 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 5/106 (4%) Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWD 62 + +K + V+D E+ L+N+ D N K R L +L+ + + +I + Sbjct: 31 KFNAAIKGLAEVVDYESNMLENHGAPDYEEINLRKTRGLRDLNKSMNDVKRYMDQDIEIE 90 Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 + L EKL NS LL +L+A R ++ + + ++ + DGTY Sbjct: 91 IQSLLTDLQEKLNRNSELLRIHLEAVRDLSQIMQVAVRAEETDGTY 136 >gi|319898620|ref|YP_004158713.1| hypothetical protein BARCL_0448 [Bartonella clarridgeiae 73] gi|319402584|emb|CBI76129.1| conserved protein of unknown function [Bartonella clarridgeiae 73] Length = 147 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 5/106 (4%) Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWD 62 ++ +K + V+D E+ L+N+ D N K R L +L+ + + +I + Sbjct: 31 KLTAAIKGLSEVVDYESNVLENHGVPDYEEINLRKTRGLRDLNKSMNDVKRYMDQDIEAE 90 Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 + +L +KL NS LL +L+A R ++ + + + + DGTY Sbjct: 91 IQPLLTSLQDKLNRNSELLRIHLEAVRDLSRIMQVAARAEETDGTY 136 >gi|319405385|emb|CBI79004.1| conserved hypothetical protein [Bartonella sp. AR 15-3] Length = 147 Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWD 62 + +K + V+D E+ L+N+ D N K R L +L+ + + +I + Sbjct: 31 KFNAAIKGLSEVVDYESNMLENHGSPDYEEINLRKTRGLRDLNKSMKDVKRYMDQDIEIE 90 Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 + L EKL NS LL +L+A + ++ + + + + DGTY Sbjct: 91 VQRLLTDLQEKLNRNSELLRIHLEAVKDLSQIMRVAARAEETDGTY 136 >gi|114705547|ref|ZP_01438450.1| hypothetical protein FP2506_13814 [Fulvimarina pelagi HTCC2506] gi|114538393|gb|EAU41514.1| hypothetical protein FP2506_13814 [Fulvimarina pelagi HTCC2506] Length = 117 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 2/104 (1%) Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEISWDHLEQ 66 + R+ AV+ E++ L ++ D+ + K + L EL+ L E + + E+ Sbjct: 5 LHNAADRLEAVLSRESEALAQSNGIDLVETAGRKNQSLLELTRLTRGLSPETLDGETRER 64 Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110 + L +LA N ++L ++ A+ ++ + K + ++DGTY Sbjct: 65 LLVLRRRLAENQAVLSQHVKASHEISTIMAKSIAAAESDGTYSS 108 >gi|312115269|ref|YP_004012865.1| hypothetical protein Rvan_2551 [Rhodomicrobium vannielii ATCC 17100] gi|311220398|gb|ADP71766.1| hypothetical protein Rvan_2551 [Rhodomicrobium vannielii ATCC 17100] Length = 118 Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEISWDHLEQIRT 69 LKR++ +D ENK L I + K L EL + +S + + D + Sbjct: 14 ALKRLVRTLDAENKALVALDARHIGEFSAAKTESLLELHHIGISISAQTLPDDLRPLVDL 73 Query: 70 LHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 +KL LN LL +L+AAR + + + ++DGTY Sbjct: 74 ARQKLDLNQWLLLMHLEAARAITATIMHAICDSESDGTYS 113 >gi|304392483|ref|ZP_07374423.1| conserved hypothetical protein [Ahrensia sp. R2A130] gi|303295113|gb|EFL89473.1| conserved hypothetical protein [Ahrensia sp. R2A130] Length = 143 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS-------CEEISWDH 63 +V+ R++A++D E+ ++ ++ + K R L E++ L + + Sbjct: 20 SVVDRLVALLDAESALIEAGETGGLADTTLAKSRMLLEINRLSTGHNDHGNSGNDQAVPT 79 Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110 +I L L N L + L AAR V+D+ L+E +D TY + Sbjct: 80 RAEIVGLKRSLERNERALAAQLSAARTVSDMVTNALREQQSDTTYSN 126 >gi|121601993|ref|YP_989415.1| hypothetical protein BARBAKC583_1156 [Bartonella bacilliformis KC583] gi|120614170|gb|ABM44771.1| conserved hypothetical protein [Bartonella bacilliformis KC583] Length = 147 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 5/106 (4%) Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-----EEISWD 62 + +K ++ V++ E+ L+++ D N K R L +L+ + + + Sbjct: 31 KFMAAVKGLVEVVEYESMMLESHGTPDYEEVNLRKTRGLRDLNQSMKDVARYMDSNVETE 90 Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 + L KL NS LL+++L+A R ++ + + + D DGTY Sbjct: 91 VANALSDLQVKLHRNSELLQTHLEAVRELSQIVQMAARAEDTDGTY 136 >gi|319409202|emb|CBI82846.1| conserved hypothetical protein [Bartonella schoenbuchensis R1] Length = 147 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 5/106 (4%) Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-----EEISWD 62 + +K + V+D E+ L+++ D N K R L +L+ + +++ Sbjct: 31 KFMAAVKGLTEVVDYESNMLESHGVPDYEEVNLRKTRGLRDLNQSMKDVMRYLDQDVENK 90 Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 + L KL NS LL+ +L+A + ++ + + + + DGTY Sbjct: 91 IESLLSDLQGKLQRNSELLQVHLEAVKELSQIMQTVARAEETDGTY 136 >gi|49474570|ref|YP_032612.1| hypothetical protein BQ10440 [Bartonella quintana str. Toulouse] gi|49240074|emb|CAF26511.1| hypothetical protein BQ10440 [Bartonella quintana str. Toulouse] Length = 133 Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 5/100 (5%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-----EEISWDHLE 65 +K + VID E+ L+++ D N K R L +L+ + E+IS + Sbjct: 34 AAVKGLAQVIDYESNMLESSGIPDYEEINLCKTRGLRDLNKSMSDIKRYMNEDISSEIES 93 Query: 66 QIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDAD 105 + L EKL NS LL+ +LDA ++ + + +AD Sbjct: 94 LLSDLQEKLHRNSELLQIHLDAVNDLSQDIQTAARTKEAD 133 >gi|49476004|ref|YP_034045.1| hypothetical protein BH13190 [Bartonella henselae str. Houston-1] gi|49238812|emb|CAF28092.1| hypothetical protein BH13190 [Bartonella henselae str. Houston-1] Length = 147 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 5/100 (5%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-----EEISWDHLE 65 +K + VID E+ L+N+ D N K R L +L+ I E+I + Sbjct: 34 AAVKNLAQVIDYESNMLENSGVPDYEEINVCKTRGLSDLNKSIGDIKRYMNEDIENEVES 93 Query: 66 QIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDAD 105 + L EKL NS LL+ +LDA ++ + + D Sbjct: 94 LLSDLQEKLRRNSELLKIHLDAVNDLSYAMQTASCTKEMD 133 >gi|240850945|ref|YP_002972345.1| hypothetical protein Bgr_14620 [Bartonella grahamii as4aup] gi|240268068|gb|ACS51656.1| hypothetical protein Bgr_14620 [Bartonella grahamii as4aup] Length = 134 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 5/87 (5%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWDHLE 65 +K + V+D E+ L+++ D N K R L +L+ + + +I + Sbjct: 34 AAVKGLAQVVDYESNMLESSGVPDYEEINLCKIRGLRDLNKSMSDVKRYMNQDIEHEVES 93 Query: 66 QIRTLHEKLALNSSLLESYLDAARVVA 92 + L EKL NS LL+++L+A ++ Sbjct: 94 LLSDLQEKLQRNSELLQTHLNAVNDLS 120 >gi|163868766|ref|YP_001609990.1| hypothetical protein Btr_1672 [Bartonella tribocorum CIP 105476] gi|161018437|emb|CAK01995.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476] Length = 134 Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%) Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWDHLE 65 +K + V+D E+ L+++ D N K R L +L+ + +I + Sbjct: 34 AAVKGLAQVVDYESNMLESSGIPDYEEINLCKIRGLRDLNKSMSDVRRYMNQDIEHEVES 93 Query: 66 QIRTLHEKLALNSSLLESYLDAARVVA 92 + L EKL NS LL++ L+A ++ Sbjct: 94 LLSDLQEKLQRNSELLQTNLNAVNDLS 120 >gi|302839996|ref|XP_002951554.1| hypothetical protein VOLCADRAFT_105158 [Volvox carteri f. nagariensis] gi|300263163|gb|EFJ47365.1| hypothetical protein VOLCADRAFT_105158 [Volvox carteri f. nagariensis] Length = 1552 Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 11/101 (10%) Query: 30 NSQFDISISNDHKGR-CLHELSVLILSCEEISWDHLEQIRTLHEKLALNSSLLESYLDAA 88 Q D + S + LH L + + D E++ + KLA + S +A Sbjct: 763 RQQVDAAQSEAASNQLSLHALQQQLEASRGREADLSEELTAMQGKLAEAARSHTSNTEAV 822 Query: 89 RVVADLFKKQ----------LQEIDADGTYHDGFCESLNPC 119 V+ + LQ DA G+Y G + L Sbjct: 823 DVLESALQTARQQYESALTELQRADAAGSYSLGLLDRLEAA 863 >gi|144900941|emb|CAM77805.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense MSR-1] Length = 155 Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 12/110 (10%) Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----------EISW 61 + + +I EN L ++ S++ K E + L E Sbjct: 27 VTELAEIIAGENMALAQGYPAGLAASSERKTELAAEYAELWEDFGPGGAAALAADPEFGH 86 Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARV-VADLFKKQLQEIDADGTYHD 110 +E +R L N + LE+ + A+R V + + Q+ GTY Sbjct: 87 ALMEAVRQLRHGAQENITRLEAAMTASRRRVEAVLEALRQDARTSGTYGA 136 >gi|326330176|ref|ZP_08196487.1| putative serine/arginine repetitive matrix protein 2 [Nocardioidaceae bacterium Broad-1] gi|325951989|gb|EGD44018.1| putative serine/arginine repetitive matrix protein 2 [Nocardioidaceae bacterium Broad-1] Length = 798 Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 21/121 (17%) Query: 4 SSDYRIQTVLKRVIAV-------IDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC 56 S DY Q V++ + V +DNE + + + + H R + VLIL Sbjct: 522 SGDYVAQRVIRALELVGCPYIDQVDNEARR-SLRPEGAVRLVTYHSSRGVEASRVLILGF 580 Query: 57 EEISWDHLEQIRTLHE-------------KLALNSSLLESYLDAARVVADLFKKQLQEID 103 EE+ + +LA++++ +LD + A +++L+ + Sbjct: 581 EELGRSMGGPLARQRNLAYVTLTRAKFGCRLAVSAARTGPHLDFVQAAAGAVRRELELAE 640 Query: 104 A 104 + Sbjct: 641 S 641 >gi|209963553|ref|YP_002296468.1| hypothetical protein RC1_0206 [Rhodospirillum centenum SW] gi|209957019|gb|ACI97655.1| hypothetical protein RC1_0206 [Rhodospirillum centenum SW] Length = 187 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 15/40 (37%) Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108 L + N + + DA VA ++ +DG Y Sbjct: 127 RLRGAVETNRRAIRAAQDAVSAVAGHIAAAVERSRSDGVY 166 >gi|254425835|ref|ZP_05039552.1| Stage II sporulation protein E [Synechococcus sp. PCC 7335] gi|196188258|gb|EDX83223.1| Stage II sporulation protein E [Synechococcus sp. PCC 7335] Length = 707 Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDA-DGTYHDGFCESLN 117 +QI L+EKL + + + LDA R + L + +E+D+ DG GF E + Sbjct: 442 AGANQQITRLNEKLKNENLRMSAELDAVRQIQQLILPRTEELDSVDGLDIAGFMEPAD 499 >gi|288962668|ref|YP_003452962.1| hypothetical protein AZL_e00730 [Azospirillum sp. B510] gi|288914934|dbj|BAI76418.1| hypothetical protein AZL_e00730 [Azospirillum sp. B510] Length = 172 Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 8/106 (7%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHEL----SVL----ILSCEEISWDH 63 ++ + AV++ E+ + + K +L + I +++ Sbjct: 47 AVEALAAVLEEESACIAVGMLDRLEAFAHRKAAMAEQLEGAVTRARDEGIRLPDDLRAMT 106 Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109 LE+I L +++N+S L + A + L++ +DGTY Sbjct: 107 LERIDRLERAVSVNASGLVALRKAVLTINRNLLAALEKASSDGTYA 152 >gi|149030822|gb|EDL85849.1| rCG37452 [Rattus norvegicus] Length = 694 Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 9/66 (13%) Query: 16 VIAVIDNENKNLKNNSQFDISIS---------NDHKGRCLHELSVLILSCEEISWDHLEQ 66 + ++ E K+ I +S + K R L++L+V I+ + + Sbjct: 91 MEDKLEAETPQPKDRPGLQIKVSVTPKTHSWADIRKERGLYQLTVAIILMSRVCKMFRQG 150 Query: 67 IRTLHE 72 +R E Sbjct: 151 LRGFRE 156 >gi|319892877|ref|YP_004149752.1| DNA repair exonuclease family protein YhaO [Staphylococcus pseudintermedius HKU10-03] gi|317162573|gb|ADV06116.1| DNA repair exonuclease family protein YhaO [Staphylococcus pseudintermedius HKU10-03] gi|323464090|gb|ADX76243.1| DNA repair exonuclease family protein [Staphylococcus pseudintermedius ED99] Length = 395 Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Query: 23 ENKNLKNNSQF----DISISNDHKGRCLHELSVLILSCEEISWDHLEQIRTLHEKLALNS 78 E +++ + F D H+GR + L + I E IS LEQ++ L + N Sbjct: 256 ETEDISQQALFELIQDFKARVRHQGRAFYRLQLNIRGDEMISPQVLEQLKVLSTEYEENE 315 Query: 79 S 79 Sbjct: 316 R 316 >gi|302669117|ref|YP_003832942.1| anaerobic ribonucleoside triphosphate reductase NrdD3 [Butyrivibrio proteoclasticus B316] gi|302397457|gb|ADL36360.1| anaerobic ribonucleoside triphosphate reductase NrdD3 [Butyrivibrio proteoclasticus B316] Length = 751 Score = 33.8 bits (76), Expect = 7.0, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 8/73 (10%) Query: 2 STSSDYRIQTVLKRVIAVIDNENKN---LKNNSQFDISISNDHKGRCLHELSVLILSCEE 58 + ++D I ++++R + EN N ++N++Q D K +L++ +L +E Sbjct: 95 ANTTDETILSLIERDNEEVKQENSNKNPIRNSTQRDYMAGEVSK-----DLTMRMLLPDE 149 Query: 59 ISWDHLEQIRTLH 71 I H E + H Sbjct: 150 IVKAHKEGVIHFH 162 >gi|163785934|ref|ZP_02180382.1| hypothetical protein FBALC1_12152 [Flavobacteriales bacterium ALC-1] gi|159877794|gb|EDP71850.1| hypothetical protein FBALC1_12152 [Flavobacteriales bacterium ALC-1] Length = 391 Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats. Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 10/99 (10%) Query: 17 IAVIDNENKNLKNNSQFDISISNDHKGRCLHELSV---------LILSCEEISWDHLEQI 67 +ID E + N + D+S++N++ R + +++ LS + ++ + Sbjct: 237 DMIIDKEEREFLNRLKTDLSLNNENIARSVDDINQFYNEHKEDVAFLSSKNLAQSFYDNS 296 Query: 68 RTLHEKL-ALNSSLLESYLDAARVVADLFKKQLQEIDAD 105 + KL NS L L ++ L + Q +D Sbjct: 297 SKVVSKLIKRNSKRLIKELSESKEAMSLLAQSTQRNLSD 335 >gi|261216565|ref|ZP_05930846.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261319436|ref|ZP_05958633.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|260921654|gb|EEX88222.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292126|gb|EEX95622.1| conserved hypothetical protein [Brucella ceti M644/93/1] Length = 81 Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 17/36 (47%) Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLH 47 ++R+ VI+ E + L D++ N K R L Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLL 81 >gi|284044825|ref|YP_003395165.1| exodeoxyribonuclease V, subunit gamma [Conexibacter woesei DSM 14684] gi|283949046|gb|ADB51790.1| exodeoxyribonuclease V, gamma subunit [Conexibacter woesei DSM 14684] Length = 1143 Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 11/99 (11%) Query: 25 KNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQIRTLHEKLALNSSLLESY 84 + + S D + R L L L+ + + +W + L L + Sbjct: 78 EAIAAASGLDAATDPWRPERALWPLLELVDAASDEAW-----LGRLTAHLDRAAGDRSRR 132 Query: 85 LDAARVVADLFKK------QLQEIDADGTYHDGFCESLN 117 L A R VA LF + + A G+ DG +L+ Sbjct: 133 LSAVRHVATLFARYALHRPAMLRAWAAGSDEDGAGGALD 171 >gi|62175869|gb|AAX69995.1| variant surface glycoprotein (VSG), putative [Trypanosoma brucei] Length = 473 Score = 33.4 bits (75), Expect = 9.2, Method: Composition-based stats. Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Query: 37 ISNDHKGRCLHELSVLILSCEEISWDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFK 96 + D + RCL+ + L + ++++ K+ L+E ++ A + +L K Sbjct: 77 TATDRQQRCLY--TALFFKASNLHRSQTQKVKNTRTKIGHALQLIERHVGAINAIQELAK 134 Query: 97 KQLQE 101 ++ E Sbjct: 135 TKVTE 139 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.311 0.139 0.357 Lambda K H 0.267 0.0424 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 2,026,387,872 Number of Sequences: 14124377 Number of extensions: 66014396 Number of successful extensions: 254427 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 115 Number of HSP's that attempted gapping in prelim test: 254189 Number of HSP's gapped (non-prelim): 259 length of query: 123 length of database: 4,842,793,630 effective HSP length: 89 effective length of query: 34 effective length of database: 3,585,724,077 effective search space: 121914618618 effective search space used: 121914618618 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 76 (33.8 bits)