HHsearch alignment for GI: 254780509 and conserved domain: COG3951

>COG3951 Rod binding protein [Cell envelope biogenesis, outer membrane / Cell motility and secretion / Posttranslational modification, protein turnover, chaperones].

Probab=99.82  E-value=2.4e-20  Score=131.49  Aligned_cols=81  Identities=15%  Similarity=0.272  Sum_probs=73.6

Q ss_pred             HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             323120789999987022855479999999999999999999951021123--357533368999999999999998079
Q gi|254780509|r   25 DDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEETVKS--LGGGFNGDFWQEILAENISDVIVKQQR  102 (112)
Q Consensus        25 ~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~~~~--lggg~a~d~~~sMl~ee~a~~iAk~gg  102 (112)
T Consensus         9 ~~~daq~l~~lk~-~a~~d~~~~l~~~ArqfE~vFv~mMLKSMR~Al~~~~~dl~~S~q~rlY~dmyDqqlaqqlss~~g   87 (166)
T COG3951           9 SAWDAQSLNELKQ-GARRDPAANLRQVARQFEGVFVQMMLKSMREALPKDGADLFNSQQTRLYTDMYDQQLAQQLSSQKG   87 (166)
T ss_pred             HHHHHHHHHHHHH-HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf             7999987788764-110181778999999999999999999999872530300104226889999999999999972588


Q ss_pred             CCCC
Q ss_conf             8756
Q gi|254780509|r  103 ITLD  106 (112)
Q Consensus       103 iGL~  106 (112)
T Consensus        88 ~GLA   91 (166)
T COG3951          88 LGLA   91 (166)
T ss_pred             CCHH
T ss_conf             5489