HHsearch alignment for GI: 254780509 and conserved domain: PRK05684
>PRK05684 flgJ peptidoglycan hydrolase; Validated.
Probab=99.90 E-value=1.1e-23 Score=149.58 Aligned_cols=84 Identities=18% Similarity=0.296 Sum_probs=75.3
Q ss_pred HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 544323120789999987022855479999999999999999999951021--123357533368999999999999998
Q gi|254780509|r 22 ISQDDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEET--VKSLGGGFNGDFWQEILAENISDVIVK 99 (112)
Q Consensus 22 is~~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~~--~~~lggg~a~d~~~sMl~ee~a~~iAk 99 (112)
T Consensus 5 ~~~~a~D~~~L~~Lk~-~a~~d~~~al~~vA~QFEalF~q~mlKsMR~A~~~~~d~l~~s~~~~~y~~M~DqQla~~ls~ 83 (313)
T PRK05684 5 LSGAALDLQSLNSLKA-KAGKDPAANLRKVAQQFEGIFVQMMLKSMRDANPVFKDGLMNSQQTKLYTSMYDQQIAQQLSA 83 (313)
T ss_pred HHHHHCCHHHHHHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 0022218788999998-854292999999999999999999999998445523588878806779999999999999860
Q ss_pred CCCCCCC
Q ss_conf 0798756
Q gi|254780509|r 100 QQRITLD 106 (112)
Q Consensus 100 ~ggiGL~ 106 (112)
T Consensus 84 ~~glGla 90 (313)
T PRK05684 84 GGGLGLA 90 (313)
T ss_pred CCCCCHH
T ss_conf 7998499