BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780510|ref|YP_003064923.1| hypothetical protein
CLIBASIA_01985 [Candidatus Liberibacter asiaticus str. psy62]
         (137 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done



>gi|116250509|ref|YP_766347.1| hypothetical protein RL0737 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255157|emb|CAK06231.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 137

 Score =  166 bits (420), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 72/132 (54%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           +  ++S+ L ++++ Q  I+ +AE++LA T  +R ++N+  + +  ++ S   ++ A + 
Sbjct: 2   IEKKRSQKLKRLLSVQRHIERMAENDLAETSRQRVEVNVAMDDVILALGSMDPVHHAFSQ 61

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           +Y   +  L+  DQ++  +Q + E  L  E+ K DRL +   E   +E R+ DD    D 
Sbjct: 62  NYADRFGRLTIKDQQLTGMQQIHEMRLTRERAKGDRLEDGMKEALEVERREADDNAVYDV 121

Query: 121 IEQRILFNAVSR 132
           I+Q+    A S+
Sbjct: 122 IDQQFATPASSK 133


>gi|241203133|ref|YP_002974229.1| hypothetical protein Rleg_0379 [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857023|gb|ACS54690.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 137

 Score =  165 bits (417), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 70/132 (53%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           +  ++S+ L ++++ Q  I+ +AE++LA T  +R ++N+  + +  ++ S   ++ A + 
Sbjct: 2   IEKKRSQKLKRLLSVQRHIERMAENDLAETSRQRVEVNVAMDDVILALGSMDPVHHAFSQ 61

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           +Y   +  L+  DQ++  +  + E  L  E+ K DRL E   E    E R+ DD    D 
Sbjct: 62  NYADRFGRLTIKDQQLTGMHQIHEMRLTRERAKGDRLEEGMQEALEAERREADDNAVYDV 121

Query: 121 IEQRILFNAVSR 132
           I+Q+    A S+
Sbjct: 122 IDQQFATPASSK 133


>gi|218463240|ref|ZP_03503331.1| hypothetical protein RetlK5_29119 [Rhizobium etli Kim 5]
          Length = 137

 Score =  164 bits (414), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 70/132 (53%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           +   +S+ L ++++ Q  I+ +AE++LA T  +R ++N   + +  ++ S   ++ A + 
Sbjct: 2   IEKSRSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNAAMDDVIVALGSMDPVHHAFSQ 61

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           +Y   +  L+  DQ++  +Q + E  L  E+ K DRL E   E   +E R+ DD    D 
Sbjct: 62  NYADRFGRLTIKDQQLTGMQQIHEMRLTRERAKADRLEEGMKEALDVERREADDNAVYDV 121

Query: 121 IEQRILFNAVSR 132
           I+Q+    A S+
Sbjct: 122 IDQQFATPASSK 133


>gi|218681682|ref|ZP_03529483.1| hypothetical protein RetlC8_23438 [Rhizobium etli CIAT 894]
          Length = 137

 Score =  163 bits (413), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 68/132 (51%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           +   +S+ L +++  Q  ++ +AE++LA T  +R ++N   + +  ++ S   ++ A + 
Sbjct: 2   VEKNRSQKLKRLLLVQRHLERMAENDLAETSRQRVEVNAAMDDVILALGSMDPVHHAFSQ 61

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           +Y   +  L+  DQ++  +Q + E  L  E+ K DR  E  ++    E R+ DD    D 
Sbjct: 62  NYADRFGRLTIKDQQLTGMQQIHEMRLARERAKGDRFEENMNDALEAERREADDNAVYDV 121

Query: 121 IEQRILFNAVSR 132
           I+Q+    A S+
Sbjct: 122 IDQQFATPASSK 133


>gi|86356339|ref|YP_468231.1| hypothetical protein RHE_CH00688 [Rhizobium etli CFN 42]
 gi|86280441|gb|ABC89504.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 137

 Score =  163 bits (412), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 68/132 (51%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           +   +S+ L ++++ Q  I+ +AE++LA T  +R ++N   + +  ++ S   ++ A + 
Sbjct: 2   IEKSRSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNAAMDDVIVALGSMDPVHHAFSQ 61

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           +Y   +  L+  DQ++  +Q + E  L  E+ K DRL E        E R+ DD    D 
Sbjct: 62  NYADRFGRLTIKDQQLTGMQQIHEMRLSRERAKADRLEEGMKGALDAERREADDNAVYDV 121

Query: 121 IEQRILFNAVSR 132
           I+Q+    A S+
Sbjct: 122 IDQQFATPASSK 133


>gi|209547955|ref|YP_002279872.1| hypothetical protein Rleg2_0347 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533711|gb|ACI53646.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 137

 Score =  162 bits (411), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 67/132 (50%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           +   +S+ L ++++ Q  I+ +AE++LA T  +R ++N   + +  ++ S   ++ A + 
Sbjct: 2   IDKNRSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNAAMDDVILALGSMDPVHHAFSQ 61

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           +Y   +  LS  D ++  +Q V E  L  E+ K DR  E   E    E R+ DD    D 
Sbjct: 62  NYADRFGRLSIKDLQLTGMQEVHEMRLARERAKGDRFEEGMKEALEAERREADDNAVYDV 121

Query: 121 IEQRILFNAVSR 132
           I+Q+    A S+
Sbjct: 122 IDQQFATPASSK 133


>gi|190890391|ref|YP_001976933.1| hypothetical protein RHECIAT_CH0000766 [Rhizobium etli CIAT 652]
 gi|190695670|gb|ACE89755.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
          Length = 137

 Score =  162 bits (410), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 69/132 (52%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           +   +S+ L ++++ Q  I+ +AE++LA T  +R ++N   + +  ++ S   ++ A + 
Sbjct: 2   IEKSRSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNAAMDDVIVALGSMDPVHHAFSQ 61

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           +Y   +  L+  DQ++  +Q + E  L  E+ K DRL E   E    E R+ DD    D 
Sbjct: 62  NYADRFGRLTIKDQQLTGMQQIHEMRLTRERAKADRLEEGMKEALDAERRESDDNAVYDV 121

Query: 121 IEQRILFNAVSR 132
           I+Q+    A S+
Sbjct: 122 IDQQFATPASSK 133


>gi|15964441|ref|NP_384794.1| hypothetical protein SMc03056 [Sinorhizobium meliloti 1021]
 gi|307318938|ref|ZP_07598369.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
 gi|15073618|emb|CAC45260.1| Hypothetical protein SMc03056 [Sinorhizobium meliloti 1021]
 gi|306895352|gb|EFN26107.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
          Length = 137

 Score =  151 bits (380), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 64/130 (49%)

Query: 3   SRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHY 62
             +S  L +++  Q  ++ +AES +A T  +R ++    + + D++ S   M+   + HY
Sbjct: 2   KARSEKLKRLVAVQRHLERMAESEVAETARQRTELAGTIDVVVDAMGSAHPMHRVFSGHY 61

Query: 63  LKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
                 L Q DQ +  +Q V E  ++ E+ K DRL E   +  L E+R+  D +  D I+
Sbjct: 62  ASQLGRLVQKDQMLLGIQQVHEARMMKERAKGDRLEEHMKDARLSEDREAADNSILDLID 121

Query: 123 QRILFNAVSR 132
           Q +   A + 
Sbjct: 122 QHVSGGAPAS 131


>gi|254780510|ref|YP_003064923.1| hypothetical protein CLIBASIA_01985 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040187|gb|ACT56983.1| hypothetical protein CLIBASIA_01985 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 137

 Score =  150 bits (379), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 137/137 (100%), Positives = 137/137 (100%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS
Sbjct: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN
Sbjct: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120

Query: 121 IEQRILFNAVSRKFMSL 137
           IEQRILFNAVSRKFMSL
Sbjct: 121 IEQRILFNAVSRKFMSL 137


>gi|150395512|ref|YP_001325979.1| hypothetical protein Smed_0285 [Sinorhizobium medicae WSM419]
 gi|150027027|gb|ABR59144.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
          Length = 137

 Score =  150 bits (378), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 64/131 (48%)

Query: 3   SRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHY 62
             +S  L +++  Q  ++ +AES +A T  +R ++    + + D++ S   M+   + HY
Sbjct: 2   KARSEKLKRLVAVQRHLERMAESEVAETARQRVELAGTIDVVVDAMGSAHPMHRVFSGHY 61

Query: 63  LKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
                 L   DQ +  +Q V E  ++ E+ K DRL E   +  L E+R+  D +  D I+
Sbjct: 62  SSQLGRLVHKDQMLLGIQQVHEARMVKERAKGDRLEENMKDARLQEDRESADNSVLDLID 121

Query: 123 QRILFNAVSRK 133
           Q +   A + +
Sbjct: 122 QYVSLGAPASR 132


>gi|307311583|ref|ZP_07591224.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|306899600|gb|EFN30229.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 137

 Score =  149 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 64/130 (49%)

Query: 3   SRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHY 62
             +S  L +++  Q  ++ +AES +A T  +R ++    + + D++ S   M+   + HY
Sbjct: 2   KARSEKLKRLVAVQRHLERMAESEVAETARQRTELAGTIDVVADAMGSAHPMHRVFSGHY 61

Query: 63  LKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
                 L Q DQ +  +Q V E  ++ E+ K DRL E   +  L E+R+  D +  D I+
Sbjct: 62  ASQLGRLVQKDQMLLGIQQVHEARMMKERAKGDRLEEHMKDARLSEDREAADNSILDLID 121

Query: 123 QRILFNAVSR 132
           Q +   A + 
Sbjct: 122 QHVSGGAPAS 131


>gi|227820884|ref|YP_002824854.1| hypothetical protein NGR_c03030 [Sinorhizobium fredii NGR234]
 gi|227339883|gb|ACP24101.1| hypothetical protein NGR_c03030 [Sinorhizobium fredii NGR234]
          Length = 137

 Score =  149 bits (375), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 66/130 (50%)

Query: 3   SRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHY 62
             +S+ L +++  Q  ++ +AES LA T  +R  ++   + + D++ S   M+   + HY
Sbjct: 2   KSRSKKLKRLVDVQRHLERMAESELAETTRQRGVLSETIDVVVDAMGSAHPMHRVFSGHY 61

Query: 63  LKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
                 L Q DQ +  +Q V E  +L E+ K DRL E  +E  + E+R+ DD    D I+
Sbjct: 62  AAQLGRLVQKDQMLLGIQQVHEARMLKERAKGDRLQESMEEARMTEDREADDNQVLDLID 121

Query: 123 QRILFNAVSR 132
           Q +   A + 
Sbjct: 122 QHVAGYAPAS 131


>gi|222084894|ref|YP_002543423.1| hypothetical protein Arad_0922 [Agrobacterium radiobacter K84]
 gi|221722342|gb|ACM25498.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 139

 Score =  143 bits (360), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 2   RSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASH 61
              +S  L +++  Q  ++ IAE+ LA T  +R +++   E++  +I+S   ++   +  
Sbjct: 3   EKSRSEKLKRLVAVQRHLERIAENELADTTRQRAEVSDSMERVIGAISSADPVHAVFSMQ 62

Query: 62  YLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNI 121
           Y + Y  L+  DQ++  +Q + E  +L E+ K +RL E   +   LE R+ DD    D I
Sbjct: 63  YAQRYGRLTLRDQQLQGIQELIEMKVLQERTKAERLEEHMKDARELETRETDDNAVYDII 122

Query: 122 EQRIL--FNAVSR 132
           +QR      A S+
Sbjct: 123 DQRFADITPASSK 135


>gi|222147598|ref|YP_002548555.1| hypothetical protein Avi_0774 [Agrobacterium vitis S4]
 gi|221734586|gb|ACM35549.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 137

 Score =  141 bits (354), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 71/129 (55%)

Query: 4   RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
           +KS+ L +++  Q  ++ IAE +L  T  +R++I    E++ +++ S   ++   A  Y 
Sbjct: 5   KKSKKLKRLVAVQRHLEKIAEYDLVETARQRQEIAAGLERVIEALGSMDPVHRLFAQSYA 64

Query: 64  KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
             +  LS +D++MA +Q VQEN +L ++ K +RL E   E    E+R+ +DE   D I+ 
Sbjct: 65  DRFDRLSGDDRRMADVQRVQENKVLRQRTKAERLQEKMLEARGHEDREAEDETLQDLIDL 124

Query: 124 RILFNAVSR 132
                A S+
Sbjct: 125 TFATPASSK 133


>gi|159184374|ref|NP_353609.2| hypothetical protein Atu0583 [Agrobacterium tumefaciens str. C58]
 gi|159139687|gb|AAK86394.2| hypothetical protein Atu0583 [Agrobacterium tumefaciens str. C58]
          Length = 139

 Score =  141 bits (354), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 2/131 (1%)

Query: 4   RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
           ++S  L +++T Q  ++ +AE  LA T   R ++    E   ++++S   ++   + HY 
Sbjct: 5   KRSEKLKRLVTVQRHMEKMAEVELADTTRVRSEVAQSMESTFEAMSSMEPVHQTFSKHYS 64

Query: 64  KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
             Y  L   D+++  +Q  QEN +L EK K DRL +       LE+R+  D    D +E 
Sbjct: 65  DRYSRLVVQDRQLEGVQQFQENKVLKEKTKADRLEDRMHIARDLEDREAGDNAIYDLLEI 124

Query: 124 RIL--FNAVSR 132
             +    A S+
Sbjct: 125 TNVSHTPASSK 135


>gi|325291971|ref|YP_004277835.1| hypothetical protein AGROH133_04006 [Agrobacterium sp. H13-3]
 gi|325059824|gb|ADY63515.1| hypothetical protein AGROH133_04006 [Agrobacterium sp. H13-3]
          Length = 139

 Score =  139 bits (349), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 2/131 (1%)

Query: 4   RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
           ++S  L +++T Q  ++ +AE  LA T   R ++    E + ++++S   ++   + HY 
Sbjct: 5   KRSAKLKRLVTVQRHMEKMAEVELADTTRVRAEVAQSMENVLEAMSSMEPVHQTFSRHYS 64

Query: 64  KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
             Y  L   D++++ +Q +QEN +L EK K DRL +       LE+R+ DD    D +E 
Sbjct: 65  DRYGRLVVKDRQLSGVQQLQENKVLKEKTKADRLEDRMHLARDLEDREADDNAIYDLLEI 124

Query: 124 RIL--FNAVSR 132
                  A S+
Sbjct: 125 TNASRTPASSK 135


>gi|218516757|ref|ZP_03513597.1| hypothetical protein Retl8_25668 [Rhizobium etli 8C-3]
          Length = 112

 Score =  137 bits (345), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 47/98 (47%)

Query: 35  KKINILREKLKDSINSTALMNPALASHYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKI 94
            ++N   + +  ++ S   ++ A + +Y   +  L+  DQ++  +Q + E  L  E+ K 
Sbjct: 11  IEVNAAMDDVIVALGSMDPVHHAFSQNYADRFGRLTIKDQQLTGMQQIHEMRLTRERAKA 70

Query: 95  DRLTEMKDETYLLEERQYDDENNNDNIEQRILFNAVSR 132
           DRL E   E    E R+ DD    D I+Q+    A S+
Sbjct: 71  DRLEEGMKEALDAERRETDDNAVYDVIDQQFATPASSK 108


>gi|315122293|ref|YP_004062782.1| hypothetical protein CKC_02725 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495695|gb|ADR52294.1| hypothetical protein CKC_02725 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 137

 Score =  127 bits (318), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 94/137 (68%), Positives = 117/137 (85%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           MR R S+ L+K+++ Q C+K IAE NLAYTIS+ KKINILRE+L DS+ S AL NP+LA 
Sbjct: 1   MRCRDSKTLHKLLSVQHCLKRIAEVNLAYTISQHKKINILREELIDSMYSIALQNPSLAC 60

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
           HY  F+HSLS+N++KMA LQ +QEN LLSEK+KIDRLTE+KDE YLLEERQYDDENN DN
Sbjct: 61  HYSNFHHSLSENEKKMADLQSIQENKLLSEKVKIDRLTELKDEIYLLEERQYDDENNEDN 120

Query: 121 IEQRILFNAVSRKFMSL 137
           ++QR+LF+AVSRKF++L
Sbjct: 121 VDQRVLFDAVSRKFITL 137


>gi|163758041|ref|ZP_02165129.1| hypothetical protein HPDFL43_00410 [Hoeflea phototrophica DFL-43]
 gi|162284330|gb|EDQ34613.1| hypothetical protein HPDFL43_00410 [Hoeflea phototrophica DFL-43]
          Length = 128

 Score =  105 bits (263), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 61/112 (54%)

Query: 1   MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
           M   ++  L +++  Q  I+ +AE+ L+ T+ ++  ++  ++ L  ++ S   ++ A++ 
Sbjct: 1   MAGSRAEKLARLVRVQRQIERMAETQLSNTLRDQAALDASQDALVKAVGSFDPVHAAMSH 60

Query: 61  HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQY 112
           +Y + +  +S   Q++  ++ VQE  +L+EK K DRLT+        EER  
Sbjct: 61  NYAQRFQRISAQSQQLEGIKSVQERRVLTEKTKADRLTDQAASAAGNEERAA 112


>gi|218509486|ref|ZP_03507364.1| hypothetical protein RetlB5_19239 [Rhizobium etli Brasil 5]
          Length = 70

 Score = 80.5 bits (197), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 32/66 (48%)

Query: 67  HSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQRIL 126
             L+  DQ++  +Q + E  L  E+ + DRL E   E    E R+ DD    D I+Q+  
Sbjct: 1   GRLTIKDQQLTGMQQIHEMRLTRERARADRLEEGMKEALDAERREADDNAVYDVIDQQFA 60

Query: 127 FNAVSR 132
             A S+
Sbjct: 61  TPASSK 66


>gi|300024563|ref|YP_003757174.1| hypothetical protein Hden_3058 [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299526384|gb|ADJ24853.1| hypothetical protein Hden_3058 [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 138

 Score = 44.3 bits (103), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/130 (10%), Positives = 44/130 (33%)

Query: 3   SRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHY 62
           + +++ L +I      ++++    ++    E   +   ++ +  S+ S + +N    +  
Sbjct: 2   ASQTKKLGRIADVFHDLETVERVRVSDLTQEIASLRAAQDDIFRSLESPSPVNGLFTALL 61

Query: 63  LKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
                 L +  Q+++    +          +      +  E    E R+ +       +E
Sbjct: 62  SSRVGRLERRIQQLSREHEIALKRYAEAAARGRSADRLLAEAKGEEARKREQAELEALLE 121

Query: 123 QRILFNAVSR 132
            +    A  R
Sbjct: 122 FQEAVGAQGR 131


>gi|218662874|ref|ZP_03518804.1| hypothetical protein RetlI_27589 [Rhizobium etli IE4771]
          Length = 36

 Score = 38.9 bits (89), Expect = 0.25,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 22/35 (62%)

Query: 1  MRSRKSRALYKIITAQCCIKSIAESNLAYTISERK 35
          +   +S+ L ++++ Q  I+ +AE++LA T  +R 
Sbjct: 2  IEKSRSQKLKRLLSVQRHIERMAENDLAETSRQRI 36


>gi|241841423|ref|XP_002415338.1| cation-transporting ATPase fly, putative [Ixodes scapularis]
 gi|215509550|gb|EEC19003.1| cation-transporting ATPase fly, putative [Ixodes scapularis]
          Length = 1139

 Score = 38.2 bits (87), Expect = 0.43,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 2/67 (2%)

Query: 69  LSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYL--LEERQYDDENNNDNIEQRIL 126
           L      +  +      T++  ++  D L     E     LEE   DD    D I   ++
Sbjct: 409 LPLESLLLRGMATCHSITVIDRQLSGDPLDLKMFEATNWVLEEPDIDDNAKYDVIAPTVV 468

Query: 127 FNAVSRK 133
               S++
Sbjct: 469 RPKTSKE 475


>gi|237841641|ref|XP_002370118.1| SPRY domain-containing protein [Toxoplasma gondii ME49]
 gi|95007238|emb|CAJ20459.1| spry domain containing protein, putative [Toxoplasma gondii RH]
 gi|211967782|gb|EEB02978.1| SPRY domain-containing protein [Toxoplasma gondii ME49]
 gi|221482580|gb|EEE20918.1| SPRY domain-containing protein, putative [Toxoplasma gondii GT1]
 gi|221503224|gb|EEE28930.1| SPRY domain-containing protein, putative [Toxoplasma gondii VEG]
          Length = 740

 Score = 37.4 bits (85), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 12/111 (10%)

Query: 19  IKSIAESNLAYTISERKKINILREKLKDSINSTA---------LMNPALASHYLKFYHSL 69
           +K++ + +L     +R K ++ R+    ++ S A         L++ A +     F  +L
Sbjct: 242 LKAMLQCDLVEE-RQRIKADLERDARLAALVSPASLTEVVRSYLLHAAFSRTLAAFERAL 300

Query: 70  SQNDQKMASLQLVQENTLLSEKIKIDR-LTEMKDETYLLEERQYDDENNND 119
           ++ D+   + +  +EN    E    +R L E   E   +EER  ++    +
Sbjct: 301 TKRDKG-ETRKNDEENGEGRETEAGERALEERAVEERAVEERAVEERAVEE 350


>gi|169861600|ref|XP_001837434.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
 gi|116501455|gb|EAU84350.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
          Length = 637

 Score = 37.4 bits (85), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 3/67 (4%)

Query: 62  YLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNI 121
           Y+ FY       Q +      Q N +L E+    RL+E        ++R  DDE+  + +
Sbjct: 414 YVLFYMR--AKGQGLEGAVKSQINGVLKEQRSKPRLSESMK-APKPKDRDADDEDKGEKL 470

Query: 122 EQRILFN 128
           ++  +  
Sbjct: 471 DRPFIGP 477


>gi|198427589|ref|XP_002124628.1| PREDICTED: similar to soluble guanylyl cyclase beta-3 subunit
           [Ciona intestinalis]
          Length = 676

 Score = 37.0 bits (84), Expect = 0.88,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)

Query: 66  YHSLSQNDQKMASLQLVQENTLL--SEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
           YH LS  D  +   Q   E  L    E+ K  RL E   E+   E+R+ DD      I +
Sbjct: 350 YHDLS-RDMVLHGPQQTSEYRLALDMEQTKATRLEE-MVESLSSEQRKTDD-LLYSMIPR 406

Query: 124 RIL 126
            + 
Sbjct: 407 EVA 409


>gi|301605337|ref|XP_002932289.1| PREDICTED: ras and EF-hand domain-containing protein [Xenopus
           (Silurana) tropicalis]
          Length = 653

 Score = 36.6 bits (83), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 12/116 (10%)

Query: 17  CCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALA---SHYLKFYHSLSQND 73
              + + E+      ++R  I  L   LK +  +TA     +     H+L       Q++
Sbjct: 125 QQYERLVENVFYDFRAQRLNIEKLESVLKRTEGATAKQIAEMEEDLQHHLTKMERQIQDE 184

Query: 74  QKM------ASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYD---DENNNDN 120
           + +        LQ   E   LS + KIDR+T+ KDE   +E ++          D 
Sbjct: 185 ELLRLNTAIQELQRKHEMETLSLQTKIDRMTKHKDERLAMESKEESAKLKNQIFDL 240


>gi|158422280|ref|YP_001523572.1| hypothetical protein AZC_0656 [Azorhizobium caulinodans ORS 571]
 gi|158329169|dbj|BAF86654.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 143

 Score = 36.2 bits (82), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 46/120 (38%), Gaps = 1/120 (0%)

Query: 3   SRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHY 62
            ++ R   +I+  Q  +   AE  +A     +  +  LR +L +++N      P L    
Sbjct: 2   KQRLRKAGRIVAVQEQMHRQAEWRMADISRAKADLERLRSELIETLNE-DTFGPLLVEVV 60

Query: 63  LKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
            +   + +    ++   Q+ QE  +  E +++ R   M +      +R  +       +E
Sbjct: 61  ARRLKATAAEADRLTQEQMRQEAKVREEALRLKRAERMHENVSRQYDRHQEHIMVAGILE 120


>gi|164661543|ref|XP_001731894.1| hypothetical protein MGL_1162 [Malassezia globosa CBS 7966]
 gi|159105795|gb|EDP44680.1| hypothetical protein MGL_1162 [Malassezia globosa CBS 7966]
          Length = 343

 Score = 36.2 bits (82), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 68  SLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYL---LEERQY 112
            ++  DQ++  +QL +E TL  +  + DR+     E+     LE R+ 
Sbjct: 93  RVAFRDQELKGIQLQKERTLTEQNERRDRIEAKLRESGGDGALERRRA 140


>gi|114564482|ref|YP_751996.1| MscS mechanosensitive ion channel [Shewanella frigidimarina NCIMB
           400]
 gi|114335775|gb|ABI73157.1| MscS Mechanosensitive ion channel [Shewanella frigidimarina NCIMB
           400]
          Length = 1078

 Score = 35.9 bits (81), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 40/100 (40%), Gaps = 7/100 (7%)

Query: 7   RALYKIITAQCC--IKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALA---SH 61
           + L ++  +Q    I+ I + N+ Y   +++  + +   L D+      ++  L+    H
Sbjct: 207 QQLNRLSLSQQETFIELINKHNIEY--RQQQTADTIANNLIDAQELADPLSQDLSKLNQH 264

Query: 62  YLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMK 101
           Y +    L+ N +     Q   E    S+  ++  + E  
Sbjct: 265 YAEQLQKLTSNIKSAIEKQQRIEKRYQSQNAQLSNVLEQI 304


>gi|169627464|ref|YP_001701113.1| hypothetical protein MAB_0360 [Mycobacterium abscessus ATCC 19977]
 gi|169239431|emb|CAM60459.1| Conserved hypothetical protein [Mycobacterium abscessus]
          Length = 220

 Score = 35.1 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 46/128 (35%), Gaps = 9/128 (7%)

Query: 8   ALYKIITAQCCIKSIAESNLAYTISERKKINILREK------LKDSINSTA--LMNPALA 59
           A+ +++ +Q   + +  + L     +     +  ++      +  S++S        A +
Sbjct: 32  AIDRLMFSQREAERVMGAGLPNVQRQSATFALDTDRPDCGSVVLASVSSYDRSPYMAAHS 91

Query: 60  SHYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNND 119
                     +  DQ +A     QE    + + + DR    +++T  + E+  D      
Sbjct: 92  QALWDHPGWFTLVDQSVAVFSTDQEARGFT-RSEADRWRTCENQTINVSEQAVDGSVLQA 150

Query: 120 NIEQRILF 127
            ++ R + 
Sbjct: 151 TVDIRDIT 158


>gi|325114210|emb|CBZ49767.1| hypothetical protein NCLIV_002550 [Neospora caninum Liverpool]
          Length = 5474

 Score = 35.1 bits (79), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 43/123 (34%), Gaps = 4/123 (3%)

Query: 5    KSRALYK-IITAQCCIKSIAESNLAYTISERKKINILREKLKDSINS-TALMNPALASHY 62
            ++  + +  +  +  +K    ++     + R+  +   ++++    S       A     
Sbjct: 4940 RTEEMERSRLEVERRLKKATATSDEEIEAVRRDFDERIDRVQREFESEREAQERAFQEKL 4999

Query: 63   LKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLE--ERQYDDENNNDN 120
             +     ++  QK+A     +E  +  ++ +   + E +      E    +      +D 
Sbjct: 5000 ARRRELFNRRKQKLAEKAQAEEARVQEDRRRKKTVAERQRSEATFECLLDEARSHPTSDT 5059

Query: 121  IEQ 123
            IEQ
Sbjct: 5060 IEQ 5062


>gi|281200428|gb|EFA74648.1| hypothetical protein PPL_11617 [Polysphondylium pallidum PN500]
          Length = 664

 Score = 35.1 bits (79), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 15  AQCCIKSIAESNLAYTIS-ERKKINILREKLKDSINSTALMNPALASHYLKFYHS 68
              C +     +     S +R  IN   E +K+  +S   ++   +  YL  +H 
Sbjct: 49  VNRCFEGDLVIDFGEVSSEQRISINRTIESIKEVADSFDRVDSVKSRSYLDDFHR 103


>gi|46120398|ref|XP_385022.1| hypothetical protein FG04846.1 [Gibberella zeae PH-1]
          Length = 1685

 Score = 35.1 bits (79), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 68  SLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNND 119
           SL   D++    Q V E     ++ K D+ TE   +T  + +R+ DD+  ND
Sbjct: 782 SLPIPDRQPLVQQGVTEQRGADDETKDDQKTEKPMDTSSVTKREADDKTEND 833


>gi|304404133|ref|ZP_07385795.1| Fibronectin-binding A domain protein [Paenibacillus curdlanolyticus
           YK9]
 gi|304347111|gb|EFM12943.1| Fibronectin-binding A domain protein [Paenibacillus curdlanolyticus
           YK9]
          Length = 584

 Score = 35.1 bits (79), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 50  STALMNPALASHYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEE 109
           S   ++  L ++Y +     +   Q+ A L    +N +   K K+D+L E  ++    ++
Sbjct: 278 SFDSISRCLEAYYGEKAGRDAVK-QRAADLLKFVQNEIAKNKTKLDKLHETVEDAKGADQ 336


>gi|288574036|ref|ZP_06392393.1| hypothetical protein Dpep_1308 [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569777|gb|EFC91334.1| hypothetical protein Dpep_1308 [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 616

 Score = 34.7 bits (78), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 13/109 (11%)

Query: 26  NLAYTISERKKINILREKLKDSINSTALMNPALASHYLKFYHSL---SQNDQKMASLQLV 82
             A  +   + +N +   L ++I +   +   LA  Y     +L      D+++  ++++
Sbjct: 37  EHADALRVFQFLNYIDFGLSEAIQTEDAL--VLARQYEILAGNLDLAVIKDEQL--IEVI 92

Query: 83  QENTLLSEKIKIDRLTEMKDETYLLEERQ------YDDENNNDNIEQRI 125
           +    L ++ K DRL E     +  + R+         E+  D+I Q+I
Sbjct: 93  EALGKLVDRTKTDRLDEQVKAAFSAKTRERIYGNLSGSEDILDSIRQQI 141


>gi|317157249|ref|XP_001826331.2| cyclohexanone 1,2-monooxygenase [Aspergillus oryzae RIB40]
          Length = 546

 Score = 34.7 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 4   RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILR 41
           R++  + K    QC I+++ E+  A+T   R  I    
Sbjct: 451 RRAEKISKQTGRQCEIEALEEAERAWTARSRSSIAGTM 488


>gi|238493571|ref|XP_002378022.1| cyclohexanone monooxygenase, putative [Aspergillus flavus NRRL3357]
 gi|220696516|gb|EED52858.1| cyclohexanone monooxygenase, putative [Aspergillus flavus NRRL3357]
          Length = 546

 Score = 34.7 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 4   RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILR 41
           R++  + K    QC I+++ E+  A+T   R  I    
Sbjct: 451 RRAEKISKQTGRQCEIEALEEAERAWTARSRSSIAGTM 488


>gi|83775075|dbj|BAE65198.1| unnamed protein product [Aspergillus oryzae]
          Length = 510

 Score = 34.7 bits (78), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 4   RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILR 41
           R++  + K    QC I+++ E+  A+T   R  I    
Sbjct: 451 RRAEKISKQTGRQCEIEALEEAERAWTARSRSSIAGTM 488


>gi|166033344|ref|ZP_02236173.1| hypothetical protein DORFOR_03070 [Dorea formicigenerans ATCC
           27755]
 gi|166027701|gb|EDR46458.1| hypothetical protein DORFOR_03070 [Dorea formicigenerans ATCC
           27755]
          Length = 537

 Score = 34.3 bits (77), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 71  QNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYD-DENNNDNIEQRILFNA 129
             + +    Q ++E  +LSE     ++ + K E  L E+R  + D       EQ +    
Sbjct: 379 IKNMETLGDQFIEEMRVLSESGGGKKIKQFKQELELAEKRIAEIDSIIMKLFEQNVAGKI 438

Query: 130 VSRKF 134
              +F
Sbjct: 439 SDGRF 443


>gi|167767452|ref|ZP_02439505.1| hypothetical protein CLOSS21_01971 [Clostridium sp. SS2/1]
 gi|167710744|gb|EDS21323.1| hypothetical protein CLOSS21_01971 [Clostridium sp. SS2/1]
 gi|291558715|emb|CBL37515.1| Site-specific recombinases, DNA invertase Pin homologs
           [butyrate-producing bacterium SSC/2]
          Length = 537

 Score = 34.3 bits (77), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 71  QNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYD-DENNNDNIEQRILFNA 129
             + +    Q ++E  +LSE     ++ + K E  L E+R  + D       EQ +    
Sbjct: 379 IKNMETLGDQFIEEMRVLSESGGGKKIKQFKQELELAEKRIAEIDSIIMKLFEQNVAGKI 438

Query: 130 VSRKF 134
              +F
Sbjct: 439 SDGRF 443


>gi|188992882|ref|YP_001904892.1| hypothetical protein xccb100_3487 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167734642|emb|CAP52852.1| Putative membrane protein [Xanthomonas campestris pv. campestris]
          Length = 407

 Score = 33.9 bits (76), Expect = 6.7,   Method: Composition-based stats.
 Identities = 7/72 (9%), Positives = 21/72 (29%), Gaps = 7/72 (9%)

Query: 19  IKSIAESNLAYTISERKKINIL-------REKLKDSINSTALMNPALASHYLKFYHSLSQ 71
           ++  A   L  T     ++ +        +    D I +   ++      + +    L  
Sbjct: 318 LRRAATVRLPDTALRLDEVLLASCSPLGPQTDDVDYIEAMRPLHRGFMQLFAQRLSQLVV 377

Query: 72  NDQKMASLQLVQ 83
             +++     V 
Sbjct: 378 QAEQVEGQAGVH 389


>gi|303248834|ref|ZP_07335084.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
 gi|302489775|gb|EFL49706.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
          Length = 501

 Score = 33.9 bits (76), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/85 (12%), Positives = 32/85 (37%), Gaps = 5/85 (5%)

Query: 10  YKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLKFYHSL 69
            +++  +       E+ L  T+         +EK+     S    +          + ++
Sbjct: 407 KQLVAVKRD----QETGLLETLRLLSTTISNQEKVICRSLSFD-AHHVTIKAEADTFETV 461

Query: 70  SQNDQKMASLQLVQENTLLSEKIKI 94
            + +++++SL+  QE  +   + K 
Sbjct: 462 EKINKQLSSLKRFQEVHIKGIRAKA 486


>gi|21230337|ref|NP_636254.1| hypothetical protein XCC0863 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769669|ref|YP_244431.1| hypothetical protein XC_3367 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111889|gb|AAM40178.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575001|gb|AAY50411.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 407

 Score = 33.9 bits (76), Expect = 8.0,   Method: Composition-based stats.
 Identities = 7/72 (9%), Positives = 21/72 (29%), Gaps = 7/72 (9%)

Query: 19  IKSIAESNLAYTISERKKINIL-------REKLKDSINSTALMNPALASHYLKFYHSLSQ 71
           ++  A   L  T     ++ +        +    D I +   ++      + +    L  
Sbjct: 318 LRRAATVRLPDTALRLDEVLLASCSPLGPQTDDVDYIEAMRPLHRGFMQLFAQRLSQLVV 377

Query: 72  NDQKMASLQLVQ 83
             +++     V 
Sbjct: 378 QAEQVEGQAGVH 389


>gi|2854208|gb|AAC02621.1| miranda [Drosophila melanogaster]
          Length = 830

 Score = 33.5 bits (75), Expect = 9.7,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 53/137 (38%), Gaps = 10/137 (7%)

Query: 8   ALYKIITAQCCIKSIAESNLAYTISERKKINILR-EKLKDSINSTALMNPA----LASHY 62
            L ++   +  +  + E+     + E  ++   + ++L +++ S  L + A    +   +
Sbjct: 165 QLSQLDVLRRHVDQLKEAE--AKLREEHELATSKTDRLIEALTSENLSHKALNEQMGQEH 222

Query: 63  LKFYHSLSQNDQKMASLQLVQENTL--LSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
                 L+  +Q++       E  +  L  + +  RL     +T   E+RQ  +E     
Sbjct: 223 ADLLERLAAMEQQLQQQHDEHERQVEALVAESEALRLANELLQTA-NEDRQKVEEQLQAQ 281

Query: 121 IEQRILFNAVSRKFMSL 137
           +       A +R+  SL
Sbjct: 282 LSALQADVAQAREHCSL 298


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.308    0.130    0.319 

Lambda     K      H
   0.267   0.0399    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 916,476,763
Number of Sequences: 14124377
Number of extensions: 26736247
Number of successful extensions: 175356
Number of sequences better than 10.0: 595
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 529
Number of HSP's that attempted gapping in prelim test: 174441
Number of HSP's gapped (non-prelim): 1462
length of query: 137
length of database: 4,842,793,630
effective HSP length: 102
effective length of query: 35
effective length of database: 3,402,107,176
effective search space: 119073751160
effective search space used: 119073751160
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 75 (33.5 bits)