HHsearch alignment for GI: 254780511 and conserved domain: COG1987
>COG1987 FliQ Flagellar biosynthesis pathway, component FliQ [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=94.90 E-value=0.22 Score=26.01 Aligned_cols=78 Identities=22% Similarity=0.183 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999999999999999999998533254899999999999999999999999999999999504
Q gi|254780511|r 169 SSFVNMLQTTFMIMLRLSSPFLFFYIVFNISIGLLNKLVPQIPIYFISTPYLIGLGSLFLCLSIEIIVYQFSHSFLYGF 247 (248)
Q Consensus 169 ~~~~~~~~~~f~~al~lA~P~i~~lll~~i~lgil~R~aPQlnvf~vg~piki~ig~~~l~l~l~~~~~~~~~~f~~~f 247 (248)
T Consensus 4 ~~~l~i~~~ai~~~L~l~~P~ll~alvvGLvIsif-QA~TQIqEqTLsFiPKIiai~~~l~~~gpWm~~~l~dft~~if 81 (89)
T COG1987 4 EDVLDIGQEAIWLVLMLSAPVLLVALVVGLVISIF-QAATQIQEQTLSFIPKIIAVFLVLILLGPWMLNQLLDFTVTIF 81 (89)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999998999999999999999-9999999999985998999999999975899999999999999