HHsearch alignment for GI: 254780511 and conserved domain: PRK12797

>PRK12797 type III secretion system protein; Provisional.
Probab=95.45  E-value=0.15  Score=27.00  Aligned_cols=55  Identities=25%  Similarity=0.248  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999999999999999999999999998533254899999999999
Q gi|254780511|r  167 IFSSFVNMLQTTFMIMLRLSSPFLFFYIVFNISIGLLNKLVPQIPIYFISTPYLIGL  223 (248)
Q Consensus       167 ~~~~~~~~~~~~f~~al~lA~P~i~~lll~~i~lgil~R~aPQlnvf~vg~piki~i  223 (248)
T Consensus       142 iPAF~iSELk~AF~IGFliyLPFlvIDlVVasi--LmamGMmMlpP~~ISlPfKllL  196 (215)
T PRK12797        142 IPAFTLSELTRAFEIGFLLYLPFIVIDLVISNI--LLAMGMMMVSPTTISLPFKLLL  196 (215)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCHHCCHHHHHHHHHHHH
T ss_conf             079999999999999999999999999999999--9982010058268757788889