BLAST/PSIBLAST alignment of GI: 254780511 and GI: 116250508 at iteration 1
>gi|116250508|ref|YP_766346.1| flagellar biosynthesis protein FliR [Rhizobium leguminosarum bv. viciae 3841] Length = 250
>gi|115255156|emb|CAK06230.1| putative flagellar biosynthetic protein FliR [Rhizobium leguminosarum bv. viciae 3841] Length = 250
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 106/244 (43%), Positives = 153/244 (62%), Gaps = 2/244 (0%)
Query: 1 MTISPEIIMMSLFLIVCRVGSCIMLLPGLSMSYIPMQVRLCFAMAFSIVLLPFLWDTIDL 60
M P+ +++LFL+ CR+G C++ LPG S + +P Q+R+ A A SI ++P LWDT+
Sbjct: 1 MITDPQGTVLALFLVFCRIGGCVLALPGFSSARVPQQLRVFIAGALSIAVMPLLWDTVYP 60
Query: 61 QNFVNRAYYSKLVMVELFLGCVHGLLIRVYTLGLQFTGSVISTAIGLNLQTSMGISDSLA 120
Y L+ E +G ++G+L R+YTLG+QF S+ + +G S I +
Sbjct: 61 AVHTGAGTYIGLIFSESLIGVMYGMLARIYTLGMQFAASITAMMVGYTQPGSADILEDTP 120
Query: 121 ETPLNSLIGIIGLLALWVIDFHHQVFYALVKSYGTIPIGQELNFGNIFSSFVNMLQTTFM 180
ET L++ I G++ L+++DFHH VF AL+ SY T+P G + SF + L+ T
Sbjct: 121 ETSLSAFITFAGMMILFIMDFHHIVFRALIDSYTTMPFGGLMQMRATLISFTDTLEQTTY 180
Query: 181 IMLRLSSPFLFFYIVFNISIGLLNKLVPQIPIYFISTPYLIGLGSLFLC-LSIEIIVYQF 239
IMLRLSSPFL + ++FN+SIG +NKL PQIP+YFISTPYL+ +G LFL SI +V QF
Sbjct: 181 IMLRLSSPFLIYGLIFNVSIGFINKLAPQIPVYFISTPYLL-MGGLFLIYFSIAAMVSQF 239
Query: 240 SHSF 243
SF
Sbjct: 240 GQSF 243