HHsearch alignment for GI: 254780512 and conserved domain: COG4789
>COG4789 EscV Type III secretory pathway, component EscV [Intracellular trafficking and secretion].
Probab=100.00 E-value=0 Score=1619.91 Aligned_cols=668 Identities=35% Similarity=0.592 Sum_probs=607.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 01001345899999999999960384789999999999999999999951377045420048999999999855488888
Q gi|254780512|r 13 DRNHLHDFAFSFCIVLIICILFLPIPTVLLDVGLASSIALSILILMVALWIEKPLEFSSFPTVLLIVTIIRLSLNIATTR 92 (692)
Q Consensus 13 ~~~~~~d~~~~~~~~~ii~~~iiPlP~~llD~~~~~ni~~s~lil~~~l~~~~pl~fs~FPslLL~~TlfRL~LniasTR 92 (692)
T Consensus 8 ~~~~~~dl~la~lll~~V~MmvlPLPt~lvD~LI~iNi~lsvlLlMvsiYi~~pL~lS~FPslLLiTTLfRLaLsISTtR 87 (689)
T COG4789 8 RIRSRPDLILALLLLMAVAMMILPLPTVLVDILIAINLTLSVLLLMVSIYIPSPLSLSVFPSLLLITTLFRLALSISTTR 87 (689)
T ss_pred HCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 14567206999999999999873884999999999989999999999875388302200538999999999997665767
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCC
Q ss_conf 98843777763267899987514501326999999999999999886457514666554544203760345478787648
Q gi|254780512|r 93 AILSFGHEGYGAAGGIIAGFSSLVMSGDFVIGLVVFMILITINFIVITKGATRIAEVGARFTLDAIPGKQMAIDADLSSG 172 (692)
Q Consensus 93 lIL~~g~~g~~~AG~vI~aFG~fVvggn~vvG~viF~Il~ivqfiVItkGa~RvaEV~ARFtLDamPGKQMaIDaDl~aG 172 (692)
T Consensus 88 lILL~ad-----AG~II~sFG~FVVGGNlvVG~VIFlIITiVQFiVItKGsERVAEVaARFsLD~MPGKQMSIDaDlRAG 162 (689)
T COG4789 88 LILLEAD-----AGEIIYSFGDFVVGGNLVVGFVIFLIITIVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLRAG 162 (689)
T ss_pred HHHHHCC-----CCHHHHHHCCEEECCCEEEEEEEEEHHHHHEEEEEECCHHHHHHHHHHEECCCCCCCCCCCCCHHHCC
T ss_conf 8887523-----25188872775675724898662133200123687056178867765210267987543203053348
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99989999999999865222201220134530105899999999988899999997399889999998999864578885
Q gi|254780512|r 173 LIEEEEAKRRRKELEEESAFFGAMDGASKFVRGDAIASIIITAINIVGGIVIGCFRYDMSIHHAADVFVRLSVGDGLVSQ 252 (692)
Q Consensus 173 ~I~~~eA~~rR~~l~~Es~fyGaMDGA~KFVkGDAiAgiiI~~iNiigG~~iG~~q~gm~~~eA~~~Yt~LTIGDGLVsQ 252 (692)
T Consensus 163 ~IDa~eAr~rRa~lekESqlyGsMDGAMKFVKGDaIAGiIIilVNiiGGi~IGv~q~gM~~~~Al~~YtvLsIGDglvsQ 242 (689)
T COG4789 163 VIDADEARERRAVLEKESQLYGSMDGAMKFVKGDAIAGIIIILVNIIGGISIGVTQHGMSFSEALHLYTVLTIGDGLVSQ 242 (689)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCEEEEEEEHHCCEEEEEEECCCCHHHHHHHEEEEEECCCHHHH
T ss_conf 86878889999999988887403420023204650023678988010676876444688889986454677874006766
Q ss_pred HHHHHHHHHHHHEEEECCCC--CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 15899987331026623774--3058999998761864899999999998615786478999999999999998864432
Q gi|254780512|r 253 VPALIISLSAAFLVSRTTSK--GSTNTAIVEQLSHYPRALLISAFFMIVLSVMPNLPAFPFIMLGGFFACAGFYVPYKNE 330 (692)
Q Consensus 253 IPaLliS~aaGiiVTRvss~--~~lg~~i~~Ql~~~p~aL~iaa~~l~~lglvPGmP~~~Fl~la~~l~~~a~~~~r~~~ 330 (692)
T Consensus 243 IPaLLIsitAGiiVTRV~g~~~~~Lg~eI~~Ql~~~pral~vaa~lll~~gliPGFP~~~Fl~LA~~~~~~~~~~~rkk~ 322 (689)
T COG4789 243 IPALLISITAGIIVTRVSGDESKNLGTEIVSQLVANPRALLVAAALLLLFGLIPGFPLLVFLFLAVLLAAIGFLLRRKKS 322 (689)
T ss_pred HHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 27999987624699963862566678999999863861789999999998725897289999999999878887321120
Q ss_pred HHHHHHHHHCCCC---CCCCCCCC--CHH--HCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
Q ss_conf 2221001100023---56676753--001--0024601221011111234575526889999999999980987883244
Q gi|254780512|r 331 LQRLAKVAQIQEA---SKQNQHSA--QLN--FITSGVELVLGSLVSNRLLSSQEDLFLRVSKIRRKFAVQYGFIVPEIKV 403 (692)
Q Consensus 331 ~~~~~~~~~~~~~---~~~~~~~~--~~~--~~~~~i~l~lg~li~l~~~~~~~~L~~rI~~iRk~la~elG~~iP~IrI 403 (692)
T Consensus 323 ~~~~~~~~~~~~~~~g~~~g~~~~~~~q~~~~~tvPlil~l~~~l~--~~l~~~~l~~~i~r~R~~lf~d~Gip~P~I~i 400 (689)
T COG4789 323 VGTKEGGDLGAITLSGSADGAASLGAEQDVSAGTVPLILRLGSDLA--KALESIDLDQEIDRMRWALFEDLGIPLPGIHI 400 (689)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHH--HHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 2676776665444677767776655545566655557999175677--54102207789999999999982998898055
Q ss_pred EEC-CCCCCCEEEEEECCEEEEEEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCE-EECCHHHHHHHHHCCCEEECHH
Q ss_conf 543-77898716999748245348841783413305888767887410147668830-3439788458882899070588
Q gi|254780512|r 404 TTD-ISLPEKGYTIRVYGTTVAISELRVGEVLVILGSGQKPTFPGDEVKEPAFGMPA-FAIMESFSDDLRRQGFHPIDNL 481 (692)
Q Consensus 404 rDn-~~L~~~~Y~I~I~Gv~va~gei~~~~lLai~~~~~~~~l~G~~~~eP~fgl~A-~WI~~~~~~~a~~~G~tvvdp~ 481 (692)
T Consensus 401 r~~~e~l~~~~~~v~l~evpv~~~~i~~~~~l~~~~~~~~-~~~~i~~~~-~~~~~~~~wv~~~~~~~l~~~g~~~~~~~ 478 (689)
T COG4789 401 RVDPEGLEDNDYEVLLNEVPVEQGKIPPDHVLLVEGSDEL-VSTGIPYPT-NPGMEQYYWVTKSHAQKLEKLGITYYAPL 478 (689)
T ss_pred ECCCCCCCCCCEEEEEECCEEEEEEECCCEEEEECCHHHH-HHCCCCCCC-CCCCCCCEEECHHHHHHHHHCCCCEECHH
T ss_conf 4177767887489997111321014068625663235667-633686778-99998515655878999986498155478
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999999987999872999999999976664899998631159989999999999974986546999999998753
Q gi|254780512|r 482 AVVLTHLSEVIRNNLSQLLSYKDVKNLISRLDPEYQKLAEETCSSHISYSGIQAVLKLLLAEHVSIRNLPLILESIAEVA 561 (692)
Q Consensus 482 ~ViatHl~evir~~a~ellg~qEvq~LLd~L~~~~P~LV~Elvp~~v~l~~i~~VLq~LL~E~VsIRdlr~IlEaLad~a 561 (692)
T Consensus 479 ~~i~~~L~~~l~r~a~efiGiQETryll~~mE~~Y~dLvKEv-qR~ip~qriaeiLqRLv~E~IsIRnmR~IlEaL~~W~ 557 (689)
T COG4789 479 DVITLHLSHVLRRNANEFIGIQETRYLLDQMERKYSDLVKEV-QRQIPLQRIAEILQRLVEERISIRNMRLILEALVEWA 557 (689)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
T ss_conf 999999999999868875136889999999863368999999-9857787899999999856887557999999997635
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCC-EEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 35799899999999998999865207788-48999888789999999830377788464566988999999999999999
Q gi|254780512|r 562 PHSRKTSHIVEQVRIRMAQQICGDLAPTG-ILNILKLGNHWDMIFYQAIQRDSKGECVDFNVEPRAVEMFSENATNSIRQ 640 (692)
Q Consensus 562 ~~~kD~~~LtE~VR~aL~R~I~~~~~~~g-~L~vi~L~p~lE~~l~~~i~~t~~G~~~~l~l~P~~~~~l~~~i~~~~~~ 640 (692)
T Consensus 558 ~kEKDvv~LtEYVR~aL~R~Ic~k~s~~~~~l~a~ll~~~iE~~iR~~IRqTsaGsy--LaLdp~~~e~il~~ir~~l~~ 635 (689)
T COG4789 558 PKEKDVVMLTEYVRSALKRYICHKFSNGGTILPALLLDPEIEDVIREAIRQTSAGSY--LALDPRQSEAILDQIRNILSG 635 (689)
T ss_pred CCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCC--CCCCHHHHHHHHHHHHHHCCC
T ss_conf 557763321999999999999887458986114899472489999874035788872--326988999999999987078
Q ss_pred HHHCCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEC
Q ss_conf 9956998799828335489999988644898189440178996579888609
Q gi|254780512|r 641 YIDKGIPLTIVTLPEIRSYIRMILERNFPSLAVLSHMEIAKGLKVNILGTIS 692 (692)
Q Consensus 641 ~~~~g~~pVLl~s~~iRr~lr~lle~~~p~l~VLS~~EI~~~~~i~~iG~Is 692 (692)
T Consensus 636 ~~~~~q~~vlltS~DiRRyVrkliE~~~~dl~VLSyQEl~~~i~i~~lg~I~ 687 (689)
T COG4789 636 TPAPGQDPVLLTSVDIRRYVRKLIESSFPDLPVLSYQELGEEINIQPLGTIV 687 (689)
T ss_pred CCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCEEEEEEE
T ss_conf 8678888079984039999999731247886454088853664411420671