PSIBLAST alignment of GI: 254780512 and protein with PDB id: 3myd
>gi|296863729|pdb|3MYD|A Chain A, Structure Of The Cytoplasmic Domain Of Flha From Helicobacter Pylori Length = 365
Score = 287 bits (734), Expect = 5e-75, Method: Composition-based stats.
Identities = 93/359 (25%), Positives = 163/359 (45%), Gaps = 8/359 (2%)
Query: 337 VAQIQEASKQNQHSAQLNFITSGVELVLGSLV-SNRLLSSQEDLFLRVSKIRRKFAVQYG 395
+E ++ + + +EL LG + S + DL R+ IR+K A YG
Sbjct: 8 AKTQEEIKREEEQAIDEVLKIEFLELALGYQLISLADMKQGGDLLERIRGIRKKIASDYG 67
Query: 396 FIVPEIKVTTDISLPEKGYTIRVYGTTVAISELRVGEVLVILGSGQKPTFPGDEVKEPAF 455
F++P+I++ ++ LP Y I++ G + + + L + G KEPAF
Sbjct: 68 FLMPQIRIRDNLQLPPTHYEIKLKGIVIGEGMVMPDKFLAMNTGFVNREIEGIPTKEPAF 127
Query: 456 GMPAFAIMESFSDDLRRQGFHPIDNLAVVLTHLSEVIRNNLSQLLSYKDVKNLISRLDPE 515
GM A I ++ QG+ ID V+ TH SE+++ ++ +VK+L+ RL +
Sbjct: 128 GMDALWIDAKNKEEAIIQGYTIIDPSTVIATHTSELVKKYAEDFITKDEVKSLLERLAKD 187
Query: 516 YQKLAEETCSSHISYSGIQAVLKLLLAEHVSIRNLPLILESIAEVAPHSR-KTSHIVEQV 574
Y + EE S I I++VL+ LL E + I+++ ILE+I ++AP + + + EQV
Sbjct: 188 YPTIVEE--SKKIPTGAIRSVLQALLHEKIPIKDMLTILETITDIAPLVQNDVNILTEQV 245
Query: 575 RIRMAQQICGDL-APTGILNILKLGNHWDMIFYQAIQRDSKGECVDFNVEPRAVEMFSEN 633
R R+++ I + G L L + ++ G + ++ E
Sbjct: 246 RARLSRVITNAFKSEDGRLKFLTFSTDSEQFLLNKLR--ENGTSKSLLLNVGELQKLIEG 303
Query: 634 ATNSIRQYIDKGIPLTIV-TLPEIRSYIRMILERNFPSLAVLSHMEIAKGLKVNILGTI 691
+ + + KGI I+ P +R + +E+ + VLSH E+ LGTI
Sbjct: 304 VSEEAMKVLQKGIAPVILIVEPNLRKALSNQMEQARIDVVVLSHAELDPNSNFEALGTI 362