RPSBLAST alignment for GI: 254780512 and conserved domain: PRK12720
>gnl|CDD|183699 PRK12720, PRK12720, secretion system apparatus protein SsaV; Provisional. Length = 675
Score = 369 bits (950), Expect = e-102
Identities = 202/678 (29%), Positives = 354/678 (52%), Gaps = 27/678 (3%)
Query: 18 HDFAFSFCIVLIICILFLPIPTVLLDVGLASSIALSILILMVALWIEKPLEFSSFPTVLL 77
D + +++ + ++ LP+PT ++D+ +A ++ S+++LM+A+++ PLEFS FP++LL
Sbjct: 15 QDIVLAVMLLVAVFMMILPLPTWMVDILIAINLMFSVILLMIAIYLRDPLEFSVFPSLLL 74
Query: 78 IVTIIRLSLNIATTRAILSFGHEGYGAAGGIIAGFSSLVMSGDFVIGLVVFMILITINFI 137
I T+ RL+L I+T+R +L H+ AG I+ F V+ G+ +GL+VF I+ + FI
Sbjct: 75 ITTLYRLALTISTSRLVL-LQHD----AGEIVDAFGKFVVGGNLAVGLIVFTIITIVQFI 129
Query: 138 VITKGATRIAEVGARFTLDAIPGKQMAIDADLSSGLIEEEEAKRRRKELEEESAFFGAMD 197
VITKG+ R+AEV ARF+LD +PGKQM+ID D+ +G+I+ +EA+R R+ +++ES GAMD
Sbjct: 130 VITKGSERVAEVSARFSLDGMPGKQMSIDGDMRAGVIDADEARRLRQHVQKESRLLGAMD 189
Query: 198 GASKFVRGDAIASIIITAINIVGGIVIGCFRYDMSIHHAADVFVRLSVGDGLVSQVPALI 257
GA KFV+GDAIA II+ +NI+GGI+IG ++DMS A + + LS+GDGL Q+P+L+
Sbjct: 190 GAMKFVKGDAIAGIIVILVNIIGGIIIGVMQHDMSASEAVNTYAVLSIGDGLCGQIPSLL 249
Query: 258 ISLSAAFLVSRTTSKGSTNTA--IVEQLSHYPRALLISAFFMIVLSVMPNLPAFPFIMLG 315
IS++A +V+R + N A + Q+ P+AL ++A +++ +++P P F L
Sbjct: 250 ISITAGIIVTRVPGEKRQNLANELSSQIGRQPQALWLAAVVLMLFALIPGFPFITFAFLA 309
Query: 316 GFFACAGFYVPYKNELQRLAKVAQIQEASKQNQHSAQLNFITSGVELVLGSLVSNRLLSS 375
A + K + A EA + + + L+L +
Sbjct: 310 ALVAAPAILLRRKKSVVS----ANGVEAGGSEEGPEGDSMVPGACPLMLRLAPTLHSADL 365
Query: 376 QEDLFLRVSKIRRKFAVQYGFIVPEIKVTTDISLPEKGYTIRVYGTTVAISELRVGEVLV 435
D+ +R G +PE+ + D L EK T+ +Y V L + +
Sbjct: 366 IRDI----DALRWFLFEDLGVPLPEVNIEVDPELTEKTLTVLLYQEPVL--SLSLPPQAL 419
Query: 436 ILGSGQKPTFPGDEVKEPAFGMPAFA-IMESFSDDLRRQGFHPIDNLAVVLTHLSEVIRN 494
+L G + GD P GM + + ++ + G + L V+
Sbjct: 420 LLLIGPDASLVGDSQTLP-NGMGQICWLTKDQAEQAQGFGLDVFAGSQRISALLKCVLLR 478
Query: 495 NLSQLLSYKDVKNLISRLDPEYQKLAEETCSSHISYSGIQAVLKLLLAEHVSIRNLPLIL 554
+ + + ++ + L+ ++ Y +L +E + I +L+ L++E VSIR+L I
Sbjct: 479 YMGEFIGVQETRYLMDAMEKRYGELVKEL-QRQLPVGKIAEILQRLVSERVSIRDLRTIF 537
Query: 555 ESIAEVAPHSRKTSHIVEQVRIRMAQQICGDLAPTG-ILNILKLGNHWDMIFYQAIQRDS 613
++ E AP + + E VRI + + I G L +L++G + + ++I++ S
Sbjct: 538 GTLVEWAPREKDVVMLTEYVRIALRRHILRRFNHEGKWLPVLRIGEGIENLIRESIRQTS 597
Query: 614 KGECVDFNVEPRAVEMFSENATNSIRQYIDKGIPLTIVTLPEIRSYIRMILERNFPSLAV 673
G + S I Q + + L +VT ++R ++R I+ER L V
Sbjct: 598 AGTYSALSSRH------STQILQLIEQALKQSQKLVLVTSVDVRRFLRKIIERTLFDLPV 651
Query: 674 LSHMEIAKGLKVNILGTI 691
LS E+ ++ ++G+I
Sbjct: 652 LSWQELGDEAEIKVVGSI 669