RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780513|ref|YP_003064926.1| hypothetical protein CLIBASIA_02000 [Candidatus Liberibacter asiaticus str. psy62] (66 letters) >1dqe_A PBP, pheromone-binding protein; helical bundle; HET: BOM; 1.80A {Bombyx mori} (A:) Length = 137 Score = 23.9 bits (51), Expect = 7.1 Identities = 7/20 (35%), Positives = 8/20 (40%) Query: 12 FKCFLKNSRKKHITPSKDVV 31 CF K + PS DV Sbjct: 115 ATCFKAEIHKLNWAPSMDVA 134 >3gf6_A Uncharacterized bacterial lipoprotein; NP_810146.1, bacterial lipoprotein of unknown function, structural genomics; HET: MSE; 1.69A {Bacteroides thetaiotaomicron vpi-5482} (A:) Length = 224 Score = 23.4 bits (50), Expect = 9.3 Identities = 8/19 (42%), Positives = 14/19 (73%) Query: 36 KKYEDRIRSSIDKKTFLTL 54 +K E+R+R IDK+++ L Sbjct: 199 QKRENRVRLRIDKESYFEL 217 >3hhs_B Propo-P1, phenoloxidase subunit 1; alpha helix, beta strand, copper, melanin biosynthesis, metal-binding, monooxygenase, oxidoreductase, secreted; 1.97A {Manduca sexta} (B:223-263,B:309-423) Length = 156 Score = 23.6 bits (51), Expect = 9.8 Identities = 3/20 (15%), Positives = 7/20 (35%) Query: 34 SIKKYEDRIRSSIDKKTFLT 53 + + D+ +I K Sbjct: 42 KLFTWRDQFLEAIQKMAIKM 61 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.321 0.136 0.377 Gapped Lambda K H 0.267 0.0620 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 455,114 Number of extensions: 16278 Number of successful extensions: 60 Number of sequences better than 10.0: 1 Number of HSP's gapped: 60 Number of HSP's successfully gapped: 10 Length of query: 66 Length of database: 4,956,049 Length adjustment: 34 Effective length of query: 32 Effective length of database: 3,806,679 Effective search space: 121813728 Effective search space used: 121813728 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 50 (23.3 bits)