Query gi|254780515|ref|YP_003064928.1| hypothetical protein CLIBASIA_02010 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 42
No_of_seqs 1 out of 3
Neff 1.0
Searched_HMMs 13730
Date Wed Jun 1 09:42:43 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780515.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1na6a2 c.52.1.22 (A:179-398) 94.9 0.0025 1.8E-07 34.4 0.5 37 2-38 164-200 (220)
2 d1nvpc_ b.56.1.1 (C:) Large ch 5.0 1.1E+02 0.0078 12.5 0.9 17 22-38 1-17 (47)
3 d1g4ma1 b.1.18.11 (A:5-175) Ar 4.6 1.1E+02 0.0083 12.3 0.8 27 9-35 142-168 (171)
4 d1nh2c_ b.56.1.1 (C:) Large ch 2.6 2E+02 0.015 11.2 0.7 16 23-38 13-28 (59)
5 d2zgwa1 b.34.1.1 (A:189-235) B 2.1 1.8E+02 0.013 11.5 -0.3 23 10-33 9-31 (47)
6 d1o8ra_ d.234.1.1 (A:) Proguan 2.1 2.4E+02 0.017 10.9 0.3 14 29-42 10-23 (94)
7 d2al6a2 b.55.1.5 (A:254-363) F 1.7 2.9E+02 0.021 10.4 1.1 17 7-23 76-93 (110)
8 d1h3ga2 b.71.1.1 (A:518-600) C 1.7 2.9E+02 0.021 10.4 0.5 22 19-40 15-36 (83)
9 d1ry9a_ d.198.1.1 (A:) Surface 1.5 3.1E+02 0.023 10.3 0.8 12 1-12 40-51 (133)
10 d2fm8a1 d.198.1.1 (A:1-134) Su 1.5 3.1E+02 0.023 10.3 1.4 13 1-13 40-52 (134)
No 1
>d1na6a2 c.52.1.22 (A:179-398) Restriction endonuclease EcoRII, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=94.94 E-value=0.0025 Score=34.40 Aligned_cols=37 Identities=19% Similarity=0.343 Sum_probs=33.3
Q ss_pred CEEEEEEECCHHHHHHHHHHCCCCEEEEEEHHHHHHH
Q ss_conf 7179998500322105532033538999852011334
Q gi|254780515|r 2 PTIHLLTVDSEIAENKAERIDKHNIILVVLDKVKKEK 38 (42)
Q Consensus 2 ptihlltvdseiaenkaeridkhniilvvldkvkkek 38 (42)
+.+||+|.+..|.+||..-+..||+.|||-+.+++.-
T Consensus 164 ~~~~L~TL~~~IS~~q~~eM~~~~v~LVVP~~i~~sy 200 (220)
T d1na6a2 164 HQVHLFTLQEGVSLAQYREMRESGVRLVVPSSLHKKY 200 (220)
T ss_dssp ---CEEECCSCCCHHHHHHHHTTTCCEECCHHHHTTS
T ss_pred HHHEEEECCCCCCHHHHHHHHHCCEEEEEEHHHHHCC
T ss_conf 5440230368888899999997796999737876307
No 2
>d1nvpc_ b.56.1.1 (C:) Large chain TOA1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.97 E-value=1.1e+02 Score=12.50 Aligned_cols=17 Identities=29% Similarity=0.651 Sum_probs=12.7
Q ss_pred CCCCEEEEEEHHHHHHH
Q ss_conf 33538999852011334
Q gi|254780515|r 22 DKHNIILVVLDKVKKEK 38 (42)
Q Consensus 22 dkhniilvvldkvkkek 38 (42)
|-.|++|-..|||.+.|
T Consensus 1 ~t~n~vlc~ydKV~R~K 17 (47)
T d1nvpc_ 1 DTENVVVCQYDKIHRSK 17 (47)
T ss_dssp CCCCEEEEEEEEEEEET
T ss_pred CCCEEEEEEEEEEEEEC
T ss_conf 96308999999887633
No 3
>d1g4ma1 b.1.18.11 (A:5-175) Arrestin {Cow (Bos taurus), beta-arrestin 1 [TaxId: 9913]}
Probab=4.58 E-value=1.1e+02 Score=12.35 Aligned_cols=27 Identities=41% Similarity=0.506 Sum_probs=20.3
Q ss_pred ECCHHHHHHHHHHCCCCEEEEEEHHHH
Q ss_conf 500322105532033538999852011
Q gi|254780515|r 9 VDSEIAENKAERIDKHNIILVVLDKVK 35 (42)
Q Consensus 9 vdseiaenkaeridkhniilvvldkvk 35 (42)
|-.-+|||-.|++.|.|.+-.+.-|+.
T Consensus 142 vk~f~ae~~dek~hkR~sVrL~IRKvq 168 (171)
T d1g4ma1 142 VKAFCAENLEEKIHKRNSVRLVIRKVQ 168 (171)
T ss_dssp EEEEEESSTTSCCCGGGEEEEEEEEEE
T ss_pred EEEEECCCCCCCCCCCCEEEEEEEEEE
T ss_conf 999882783214643232788998742
No 4
>d1nh2c_ b.56.1.1 (C:) Large chain TOA1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.58 E-value=2e+02 Score=11.15 Aligned_cols=16 Identities=38% Similarity=0.688 Sum_probs=12.8
Q ss_pred CCCEEEEEEHHHHHHH
Q ss_conf 3538999852011334
Q gi|254780515|r 23 KHNIILVVLDKVKKEK 38 (42)
Q Consensus 23 khniilvvldkvkkek 38 (42)
-.|++|-..|||.+-|
T Consensus 13 ~~n~vlc~yDKV~R~K 28 (59)
T d1nh2c_ 13 DENLMLCLYDKVTRTK 28 (59)
T ss_dssp -CCEEEEEEEEEEEET
T ss_pred CCCEEEEEEEEEEECC
T ss_conf 7868999998885116
No 5
>d2zgwa1 b.34.1.1 (A:189-235) Biotin--[acetyl-CoA-carboxylase] ligase C-terminal domain {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=2.11 E-value=1.8e+02 Score=11.47 Aligned_cols=23 Identities=35% Similarity=0.530 Sum_probs=16.4
Q ss_pred CCHHHHHHHHHHCCCCEEEEEEHH
Q ss_conf 003221055320335389998520
Q gi|254780515|r 10 DSEIAENKAERIDKHNIILVVLDK 33 (42)
Q Consensus 10 dseiaenkaeridkhniilvvldk 33 (42)
|.|+ |.-||.||...-..+-||.
T Consensus 9 dg~~-egiaedide~grli~rl~~ 31 (47)
T d2zgwa1 9 DGSF-EGIAEDIDDFGRLIIRLDS 31 (47)
T ss_dssp SSEE-EEEEEEECTTSCEEEECTT
T ss_pred CCCE-ECHHHHHHHHCEEEEEECC
T ss_conf 8725-0154506644018999248
No 6
>d1o8ra_ d.234.1.1 (A:) Proguanylin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.10 E-value=2.4e+02 Score=10.86 Aligned_cols=14 Identities=50% Similarity=0.610 Sum_probs=8.5
Q ss_pred EEEHHHHHHHHHCC
Q ss_conf 98520113343049
Q gi|254780515|r 29 VVLDKVKKEKHLKE 42 (42)
Q Consensus 29 vvldkvkkekhlke 42 (42)
+-|+-|||-|.|.|
T Consensus 10 f~LESVKkLk~L~e 23 (94)
T d1o8ra_ 10 FSLESVKKLKDLQE 23 (94)
T ss_dssp ECSHHHHTTTTCCS
T ss_pred EEHHHHHHHHHHHH
T ss_conf 62899998999873
No 7
>d2al6a2 b.55.1.5 (A:254-363) Focal adhesion kinase 1 {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=1.68 E-value=2.9e+02 Score=10.43 Aligned_cols=17 Identities=53% Similarity=0.563 Sum_probs=10.2
Q ss_pred EEECC-HHHHHHHHHHCC
Q ss_conf 98500-322105532033
Q gi|254780515|r 7 LTVDS-EIAENKAERIDK 23 (42)
Q Consensus 7 ltvds-eiaenkaeridk 23 (42)
++.+| +.|||-|.-||.
T Consensus 76 it~~s~~~Ae~lAdLIdG 93 (110)
T d2al6a2 76 VTAPSLTIAENMADLIDG 93 (110)
T ss_dssp EEESSHHHHHHHHHHHHH
T ss_pred EECCCHHHHHHHHHHHHH
T ss_conf 985888898789998643
No 8
>d1h3ga2 b.71.1.1 (A:518-600) Cyclomaltodextrinase {Flavobacterium sp. 92 [TaxId: 197856]}
Probab=1.68 E-value=2.9e+02 Score=10.43 Aligned_cols=22 Identities=27% Similarity=0.360 Sum_probs=14.3
Q ss_pred HHHCCCCEEEEEEHHHHHHHHH
Q ss_conf 3203353899985201133430
Q gi|254780515|r 19 ERIDKHNIILVVLDKVKKEKHL 40 (42)
Q Consensus 19 eridkhniilvvldkvkkekhl 40 (42)
.|.++...++|++.+-.+++.+
T Consensus 15 fR~~~~~~VmVi~N~n~~~~~l 36 (83)
T d1h3ga2 15 FRYNKDKRIMVAMNNNDKPMTL 36 (83)
T ss_dssp EEECSSEEEEEEEECSSSCEEE
T ss_pred EEEECCCEEEEEECCCCCCEEE
T ss_conf 9991998899998799965787
No 9
>d1ry9a_ d.198.1.1 (A:) Surface presentation of antigens protein SpaK (Spa15) {Shigella flexneri [TaxId: 623]}
Probab=1.53 E-value=3.1e+02 Score=10.27 Aligned_cols=12 Identities=33% Similarity=0.708 Sum_probs=6.3
Q ss_pred CCEEEEEEECCH
Q ss_conf 971799985003
Q gi|254780515|r 1 MPTIHLLTVDSE 12 (42)
Q Consensus 1 mptihlltvdse 12 (42)
||.|++..+|-+
T Consensus 40 ~P~I~I~~~ddd 51 (133)
T d1ry9a_ 40 MPAINIALVNEQ 51 (133)
T ss_dssp EEEEEEEEETTE
T ss_pred CCCEEEEECCCC
T ss_conf 997226843782
No 10
>d2fm8a1 d.198.1.1 (A:1-134) Surface presentation of antigens protein SpaK (Spa15) {Salmonella typhimurium [TaxId: 90371]}
Probab=1.52 E-value=3.1e+02 Score=10.26 Aligned_cols=13 Identities=23% Similarity=0.631 Sum_probs=0.0
Q ss_pred CCEEEEEEECCHH
Q ss_conf 9717999850032
Q gi|254780515|r 1 MPTIHLLTVDSEI 13 (42)
Q Consensus 1 mptihlltvdsei 13 (42)
||.|++-.+|-++
T Consensus 40 ~P~I~I~~~dddv 52 (134)
T d2fm8a1 40 LPSICISVKDDDV 52 (134)
T ss_dssp SCCEEEEEETTEE
T ss_pred CCCEEEEECCCEE
T ss_conf 9973368438808
Done!