HHsearch alignment for GI: 254780516 and conserved domain: PRK03522

>PRK03522 rumB 23S rRNA methyluridine methyltransferase; Reviewed.
Probab=97.75  E-value=2.8e-05  Score=46.90  Aligned_cols=72  Identities=19%  Similarity=0.266  Sum_probs=51.5

Q ss_pred             EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCC-----C-CCCCEEEEEECCCCCCCEEEEECCCC
Q ss_conf             69641079478899998722208956999980695551122200123-----3-23211589753657887199986899
Q gi|254780516|r    3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPN-----T-LIFGDIAKIKTQDIPDHDVLLAGFPC   76 (83)
Q Consensus         3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~-----~-~~~~DI~~~~~~~~~~~D~l~gG~PC   76 (83)
T Consensus       236 ~vlDlycG~G~~sl~lA~-----~~~~V~gvE~~~~av~~A~~na~~ngi~nv~f~~~d~~~~~~~~~~~~d~vvvDPPR  310 (375)
T PRK03522        236 SMWDLFCGVGGFGLHCAT-----PDMQLTGIEISAEAIACAKQSAAELGLTNVQFQALDSTQFATAQGEVPELVLVNPPR  310 (375)
T ss_pred             EEEEECCCCCHHHHHHHH-----CCCEEEEEEECHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCCEEEECCCC
T ss_conf             899965785388898764-----178899998459999999999998699876999737788876345689789989997


Q ss_pred             CCC
Q ss_conf             754
Q gi|254780516|r   77 QPF   79 (83)
Q Consensus        77 q~f   79 (83)
T Consensus       311 ~Gl  313 (375)
T PRK03522        311 RGI  313 (375)
T ss_pred             CCC
T ss_conf             775