HHsearch alignment for GI: 254780516 and conserved domain: PRK10458

>PRK10458 DNA cytosine methylase; Provisional.
Probab=99.96  E-value=2.3e-30  Score=172.89  Aligned_cols=78  Identities=55%  Similarity=0.914  Sum_probs=69.2

Q ss_pred             CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCC----CCCEEEEEEC----------------
Q ss_conf             26964107947889999872220895699998069555112220012332----3211589753----------------
Q gi|254780516|r    2 LKITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFPNTL----IFGDIAKIKT----------------   61 (83)
Q Consensus         2 l~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~~~~----~~~DI~~~~~----------------   61 (83)
T Consensus        92 f~FIDLFAGIGG~r~~~e~~----gg~CVfssE~dk~a~~tY~an~~~~~~~~~~~~di~~i~~~~~~~v~~~~~~~~~~  167 (470)
T PRK10458         92 FRFIDLFAGIGGIRRGFEAI----GGQCVFTSEWNKHAVRTYKANWYCDPATHRFNEDIRDITLSHKEGVSDEEAAEHIR  167 (470)
T ss_pred             CEEEEECCCCCHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
T ss_conf             66763357755677999973----99799985068999999999659986434356861002235566544200000111


Q ss_pred             CCCCCCEEEEECCCCCCCCCCC
Q ss_conf             6578871999868997543689
Q gi|254780516|r   62 QDIPDHDVLLAGFPCQPFSQAG   83 (83)
Q Consensus        62 ~~~~~~D~l~gG~PCq~fS~aG   83 (83)
T Consensus       168 ~~iP~~dil~aGFPCQ~fS~aG  189 (470)
T PRK10458        168 QHIPDHDVLLAGFPCQPFSLAG  189 (470)
T ss_pred             CCCCCCCEEECCCCCCHHHHHC
T ss_conf             4699616773178996354543