HHsearch alignment for GI: 254780516 and conserved domain: pfam00398
>pfam00398 RrnaAD Ribosomal RNA adenine dimethylase.
Probab=90.82 E-value=0.62 Score=25.11 Aligned_cols=67 Identities=18% Similarity=0.323 Sum_probs=47.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCC---C-CCCCCEEEEEECCCCCCCEEEEECCC
Q ss_conf 6964107947889999872220895699998069555112220012---3-32321158975365788719998689
Q gi|254780516|r 3 KITDLFCGIGGIRLDLEQTFNHRNVECFFSSEINPYSVKTYQANFP---N-TLIFGDIAKIKTQDIPDHDVLLAGFP 75 (83)
Q Consensus 3 ~v~~LFsG~GG~~~gl~~a~~~~~~~~v~a~e~d~~a~~~y~~n~~---~-~~~~~DI~~~~~~~~~~~D~l~gG~P 75 (83)
T Consensus 33 ~VlEIGPG~G~LT~~L~~~-----~~~v~aiE~D~~l~~~L~~~~~~~~~~~ii~~D~l~~d~~~~~~~-~vvgNLP 103 (258)
T pfam00398 33 TVLEIGPGKGALTEELAKR-----AKQVVAIEIDPRLAKRLQKKLALHPNVEVVHQDFLKFSFPKHEPF-LVVGNIP 103 (258)
T ss_pred EEEEECCCHHHHHHHHHHC-----CCCEEEEECCHHHHHHHHHHHCCCCCEEEEECCHHCCCCCCCCCE-EEEECCC
T ss_conf 7999799623999999961-----694799954477999999864428977999663010575457861-6894488